Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06870

Experiment: R2A with Aluminum chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Aluminum chloride 1 mM
1,706,817	-		CA265_RS06865	0.33	+0.2
1,706,846	-		CA265_RS06865	0.40	+0.7
1,706,846	-		CA265_RS06865	0.40	-1.2
1,706,848	-		CA265_RS06865	0.40	-0.2
1,706,909	-		CA265_RS06865	0.53	+0.7
1,706,928	-		CA265_RS06865	0.58	-0.3
1,706,984	-		CA265_RS06865	0.70	-0.3
1,707,098	-				-0.5
1,707,098	-				+0.4
1,707,098	-				+0.1
1,707,102	-				-0.7
1,707,165	+				+1.2
1,707,200	+				+1.5
1,707,256	-				+0.1
1,707,290	+				+1.1
1,707,298	-				+0.8
1,707,306	-				-0.7
1,707,372	+				+0.6
1,707,387	+				+0.7
1,707,388	-				-1.0
1,707,397	+				+0.8
1,707,397	+				+1.3
1,707,398	-				+0.2
1,707,401	+				+1.1
1,707,402	-				+0.9
1,707,407	+				+0.4
1,707,478	-				-0.4
1,707,499	-				+0.2
1,707,628	+				+2.0
1,707,631	-				-2.1
1,707,690	-				-2.8
1,707,740	+				-2.1
1,707,838	-				-1.7
1,707,898	+				-2.5
1,707,932	-		CA265_RS06870	0.11	-2.5
1,707,951	-		CA265_RS06870	0.13	-2.2
1,708,007	+		CA265_RS06870	0.18	-2.7
1,708,026	+		CA265_RS06870	0.20	-2.3
1,708,045	-		CA265_RS06870	0.22	-2.1
1,708,066	+		CA265_RS06870	0.24	-2.5
1,708,072	+		CA265_RS06870	0.24	-1.7
1,708,078	+		CA265_RS06870	0.25	-2.0
1,708,155	+		CA265_RS06870	0.32	-1.1
1,708,155	+		CA265_RS06870	0.32	-2.1
1,708,165	+		CA265_RS06870	0.33	-1.2
1,708,288	+		CA265_RS06870	0.44	-1.5
1,708,289	-		CA265_RS06870	0.44	-1.8
1,708,300	+		CA265_RS06870	0.45	-1.5
1,708,360	+		CA265_RS06870	0.51	-1.9
1,708,361	-		CA265_RS06870	0.51	-2.7
1,708,385	-		CA265_RS06870	0.53	-0.9
1,708,420	+		CA265_RS06870	0.56	-2.4
1,708,420	+		CA265_RS06870	0.56	-1.8
1,708,459	-		CA265_RS06870	0.60	-1.1
1,708,503	+		CA265_RS06870	0.64	-2.1
1,708,504	-		CA265_RS06870	0.64	-1.3
1,708,636	-		CA265_RS06870	0.76	-2.8
1,708,636	-		CA265_RS06870	0.76	-1.9
1,708,651	+		CA265_RS06870	0.78	-1.8
1,708,655	+		CA265_RS06870	0.78	-2.0
1,708,655	+		CA265_RS06870	0.78	-3.1
1,708,656	-		CA265_RS06870	0.78	-1.3
1,708,656	-		CA265_RS06870	0.78	-2.1
1,708,656	-		CA265_RS06870	0.78	-0.6
1,708,656	-		CA265_RS06870	0.78	-1.7
1,708,660	+		CA265_RS06870	0.79	-1.8
1,708,661	-		CA265_RS06870	0.79	-1.9
1,708,693	+		CA265_RS06870	0.82	-2.2
1,708,693	+		CA265_RS06870	0.82	-3.3
1,708,707	+		CA265_RS06870	0.83	-2.5
1,708,751	+		CA265_RS06870	0.87	-1.7
1,708,751	+		CA265_RS06870	0.87	-1.6
1,708,758	+		CA265_RS06870	0.88	-1.6
1,708,759	-		CA265_RS06870	0.88	-3.2
1,708,797	+				-1.5
1,708,906	+				+1.7
1,708,907	-				-2.1
1,708,910	+				+1.4
1,708,951	+				-1.1
1,708,960	-				-2.2
1,708,967	-				-1.1
1,709,001	-				-1.2
1,709,011	+				-2.3
1,709,026	+				-1.5
1,709,130	+				-2.4
1,709,145	-				-3.6
1,709,194	-				-2.9
1,709,197	+				-1.1
1,709,317	+		CA265_RS06875	0.13	-1.9
1,709,318	-		CA265_RS06875	0.13	-1.4
1,709,347	+		CA265_RS06875	0.14	-1.7
1,709,347	+		CA265_RS06875	0.14	-1.1
1,709,381	-		CA265_RS06875	0.15	-0.8
1,709,385	-		CA265_RS06875	0.15	-1.2
1,709,483	-		CA265_RS06875	0.18	-1.3
1,709,570	-		CA265_RS06875	0.21	-1.4
1,709,639	-		CA265_RS06875	0.23	-2.1
1,709,704	-		CA265_RS06875	0.25	-2.5
1,709,751	-		CA265_RS06875	0.26	-0.6
1,709,782	+		CA265_RS06875	0.27	-2.2
1,709,782	+		CA265_RS06875	0.27	-2.0
1,709,801	+		CA265_RS06875	0.28	-3.5
1,709,807	-		CA265_RS06875	0.28	-0.8
1,709,888	+		CA265_RS06875	0.31	-2.3
1,709,889	-		CA265_RS06875	0.31	-2.3