Experiment: R2A with Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02410 and CA265_RS02415 are separated by 200 nucleotides CA265_RS02415 and CA265_RS02420 are separated by 74 nucleotides
CA265_RS02410: CA265_RS02410 - hypothetical protein, at 596,691 to 597,500
_RS02410
CA265_RS02415: CA265_RS02415 - monofunctional biosynthetic peptidoglycan transglycosylase, at 597,701 to 598,429
_RS02415
CA265_RS02420: CA265_RS02420 - hypothetical protein, at 598,504 to 600,921
_RS02420
Position (kb) 597
598
599 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 596.730 kb on - strand at 596.792 kb on + strand, within CA265_RS02410 at 596.867 kb on - strand, within CA265_RS02410 at 596.875 kb on - strand, within CA265_RS02410 at 596.880 kb on - strand, within CA265_RS02410 at 596.889 kb on - strand, within CA265_RS02410 at 596.895 kb on - strand, within CA265_RS02410 at 596.895 kb on - strand, within CA265_RS02410 at 596.993 kb on - strand, within CA265_RS02410 at 596.993 kb on - strand, within CA265_RS02410 at 597.076 kb on - strand, within CA265_RS02410 at 597.166 kb on - strand, within CA265_RS02410 at 597.170 kb on + strand, within CA265_RS02410 at 597.170 kb on + strand, within CA265_RS02410 at 597.171 kb on - strand, within CA265_RS02410 at 597.229 kb on + strand, within CA265_RS02410 at 597.230 kb on - strand, within CA265_RS02410 at 597.230 kb on - strand, within CA265_RS02410 at 597.248 kb on + strand, within CA265_RS02410 at 597.249 kb on - strand, within CA265_RS02410 at 597.249 kb on - strand, within CA265_RS02410 at 597.253 kb on + strand, within CA265_RS02410 at 597.253 kb on + strand, within CA265_RS02410 at 597.254 kb on - strand, within CA265_RS02410 at 597.254 kb on - strand, within CA265_RS02410 at 597.287 kb on - strand, within CA265_RS02410 at 597.296 kb on - strand, within CA265_RS02410 at 597.332 kb on + strand, within CA265_RS02410 at 597.352 kb on + strand, within CA265_RS02410 at 597.431 kb on + strand at 597.489 kb on + strand at 597.553 kb on - strand at 597.553 kb on - strand at 597.573 kb on - strand at 597.727 kb on + strand at 597.770 kb on - strand at 597.836 kb on - strand, within CA265_RS02415 at 597.851 kb on - strand, within CA265_RS02415 at 597.937 kb on + strand, within CA265_RS02415 at 597.938 kb on - strand, within CA265_RS02415 at 597.949 kb on + strand, within CA265_RS02415 at 597.998 kb on - strand, within CA265_RS02415 at 598.039 kb on + strand, within CA265_RS02415 at 598.073 kb on - strand, within CA265_RS02415 at 598.153 kb on + strand, within CA265_RS02415 at 598.202 kb on + strand, within CA265_RS02415 at 598.212 kb on + strand, within CA265_RS02415 at 598.263 kb on - strand, within CA265_RS02415 at 598.265 kb on + strand, within CA265_RS02415 at 598.292 kb on - strand, within CA265_RS02415 at 598.308 kb on + strand, within CA265_RS02415 at 598.364 kb on + strand at 598.383 kb on - strand at 598.399 kb on + strand at 598.461 kb on - strand at 598.499 kb on + strand at 598.499 kb on + strand at 598.556 kb on - strand at 598.565 kb on - strand at 598.611 kb on + strand at 598.660 kb on + strand at 598.660 kb on + strand at 598.678 kb on + strand at 598.685 kb on + strand at 598.685 kb on + strand at 598.723 kb on + strand at 598.738 kb on - strand at 598.965 kb on - strand, within CA265_RS02420 at 599.039 kb on - strand, within CA265_RS02420 at 599.039 kb on - strand, within CA265_RS02420 at 599.064 kb on + strand, within CA265_RS02420 at 599.064 kb on + strand, within CA265_RS02420 at 599.138 kb on - strand, within CA265_RS02420 at 599.152 kb on + strand, within CA265_RS02420 at 599.153 kb on - strand, within CA265_RS02420 at 599.266 kb on - strand, within CA265_RS02420 at 599.266 kb on - strand, within CA265_RS02420 at 599.270 kb on - strand, within CA265_RS02420 at 599.350 kb on + strand, within CA265_RS02420 at 599.406 kb on + strand, within CA265_RS02420 at 599.407 kb on - strand, within CA265_RS02420
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Aluminum chloride 1 mM remove 596,730 - -0.8 596,792 + CA265_RS02410 0.12 +0.1 596,867 - CA265_RS02410 0.22 +0.8 596,875 - CA265_RS02410 0.23 -0.6 596,880 - CA265_RS02410 0.23 +0.5 596,889 - CA265_RS02410 0.24 -0.1 596,895 - CA265_RS02410 0.25 +0.4 596,895 - CA265_RS02410 0.25 -0.2 596,993 - CA265_RS02410 0.37 -0.2 596,993 - CA265_RS02410 0.37 -0.5 597,076 - CA265_RS02410 0.48 +0.3 597,166 - CA265_RS02410 0.59 -0.0 597,170 + CA265_RS02410 0.59 +2.0 597,170 + CA265_RS02410 0.59 +0.2 597,171 - CA265_RS02410 0.59 +0.4 597,229 + CA265_RS02410 0.66 -3.3 597,230 - CA265_RS02410 0.67 +0.3 597,230 - CA265_RS02410 0.67 +0.2 597,248 + CA265_RS02410 0.69 +0.2 597,249 - CA265_RS02410 0.69 -0.5 597,249 - CA265_RS02410 0.69 +0.3 597,253 + CA265_RS02410 0.69 -0.1 597,253 + CA265_RS02410 0.69 +0.3 597,254 - CA265_RS02410 0.70 -0.7 597,254 - CA265_RS02410 0.70 -0.1 597,287 - CA265_RS02410 0.74 -0.5 597,296 - CA265_RS02410 0.75 -0.3 597,332 + CA265_RS02410 0.79 +0.2 597,352 + CA265_RS02410 0.82 +0.1 597,431 + +2.4 597,489 + +0.2 597,553 - +0.5 597,553 - +0.3 597,573 - -0.2 597,727 + -2.1 597,770 - -1.6 597,836 - CA265_RS02415 0.19 -2.2 597,851 - CA265_RS02415 0.21 -3.1 597,937 + CA265_RS02415 0.32 -2.8 597,938 - CA265_RS02415 0.33 -3.2 597,949 + CA265_RS02415 0.34 -1.9 597,998 - CA265_RS02415 0.41 -3.2 598,039 + CA265_RS02415 0.46 -2.2 598,073 - CA265_RS02415 0.51 -3.1 598,153 + CA265_RS02415 0.62 -2.2 598,202 + CA265_RS02415 0.69 -0.2 598,212 + CA265_RS02415 0.70 -2.8 598,263 - CA265_RS02415 0.77 -3.1 598,265 + CA265_RS02415 0.77 -2.7 598,292 - CA265_RS02415 0.81 -2.5 598,308 + CA265_RS02415 0.83 -3.1 598,364 + -3.6 598,383 - -3.0 598,399 + -1.4 598,461 - -1.7 598,499 + +1.0 598,499 + -0.2 598,556 - -0.1 598,565 - -1.2 598,611 + +0.5 598,660 + -0.5 598,660 + +0.4 598,678 + -0.7 598,685 + +0.2 598,685 + -1.0 598,723 + +0.6 598,738 - -0.2 598,965 - CA265_RS02420 0.19 -0.2 599,039 - CA265_RS02420 0.22 -2.0 599,039 - CA265_RS02420 0.22 -0.6 599,064 + CA265_RS02420 0.23 +0.8 599,064 + CA265_RS02420 0.23 +0.3 599,138 - CA265_RS02420 0.26 +0.5 599,152 + CA265_RS02420 0.27 -0.1 599,153 - CA265_RS02420 0.27 +0.9 599,266 - CA265_RS02420 0.32 -0.5 599,266 - CA265_RS02420 0.32 -0.3 599,270 - CA265_RS02420 0.32 +0.4 599,350 + CA265_RS02420 0.35 +0.2 599,406 + CA265_RS02420 0.37 +0.2 599,407 - CA265_RS02420 0.37 -0.3
Or see this region's nucleotide sequence