Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_901 and Ac3H11_902 are separated by 134 nucleotides Ac3H11_902 and Ac3H11_903 are separated by 90 nucleotides
Ac3H11_901 - Beta-lactamase (EC 3.5.2.6), at 12,819 to 13,700
_901
Ac3H11_902 - Glycine cleavage system transcriptional activator, at 13,835 to 14,713
_902
Ac3H11_903 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 14,804 to 17,833
_903
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 12.907 kb on + strand at 13.387 kb on + strand, within Ac3H11_901 at 13.387 kb on + strand, within Ac3H11_901 at 13.722 kb on - strand at 13.760 kb on + strand at 13.792 kb on + strand at 13.792 kb on + strand at 13.792 kb on + strand at 14.784 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.806 kb on - strand at 14.806 kb on - strand at 14.806 kb on - strand at 15.064 kb on - strand at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.241 kb on - strand, within Ac3H11_903 at 15.241 kb on - strand, within Ac3H11_903 at 15.241 kb on - strand, within Ac3H11_903 at 15.281 kb on - strand, within Ac3H11_903 at 15.281 kb on - strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.499 kb on - strand, within Ac3H11_903 at 15.499 kb on - strand, within Ac3H11_903 at 15.538 kb on + strand, within Ac3H11_903 at 15.539 kb on - strand, within Ac3H11_903 at 15.539 kb on - strand, within Ac3H11_903 at 15.636 kb on + strand, within Ac3H11_903 at 15.636 kb on + strand, within Ac3H11_903
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 12,907 + -1.2 13,387 + Ac3H11_901 0.64 -2.3 13,387 + Ac3H11_901 0.64 +1.0 13,722 - +0.9 13,760 + +0.9 13,792 + +0.5 13,792 + -0.4 13,792 + +0.5 14,784 + +3.2 14,805 + -0.0 14,805 + +0.6 14,805 + -3.4 14,805 + -0.9 14,805 + -1.7 14,805 + -1.5 14,806 - -2.9 14,806 - -2.8 14,806 - +2.7 15,064 - -2.2 15,240 + Ac3H11_903 0.14 -2.7 15,240 + Ac3H11_903 0.14 -2.6 15,240 + Ac3H11_903 0.14 -0.6 15,240 + Ac3H11_903 0.14 +0.7 15,240 + Ac3H11_903 0.14 +0.6 15,241 - Ac3H11_903 0.14 -1.0 15,241 - Ac3H11_903 0.14 -2.9 15,241 - Ac3H11_903 0.14 -0.2 15,281 - Ac3H11_903 0.16 +1.0 15,281 - Ac3H11_903 0.16 -0.7 15,486 + Ac3H11_903 0.23 +1.8 15,486 + Ac3H11_903 0.23 -0.5 15,486 + Ac3H11_903 0.23 -1.4 15,486 + Ac3H11_903 0.23 -0.5 15,499 - Ac3H11_903 0.23 -0.0 15,499 - Ac3H11_903 0.23 +0.0 15,538 + Ac3H11_903 0.24 -0.5 15,539 - Ac3H11_903 0.24 +1.9 15,539 - Ac3H11_903 0.24 +0.9 15,636 + Ac3H11_903 0.27 +1.2 15,636 + Ac3H11_903 0.27 -0.9
Or see this region's nucleotide sequence