Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_897 and Ac3H11_898 are separated by 358 nucleotides Ac3H11_898 and Ac3H11_899 are separated by 17 nucleotides Ac3H11_899 and Ac3H11_900 are separated by 84 nucleotides
Ac3H11_897 - Beta-lactamase (EC 3.5.2.6), at 6,700 to 8,571
_897
Ac3H11_898 - hypothetical protein, at 8,930 to 9,181
_898
Ac3H11_899 - Cell division protein FtsH (EC 3.4.24.-), at 9,199 to 11,226
_899
Ac3H11_900 - N-acetylglutamate synthase (EC 2.3.1.1), at 11,311 to 12,657
_900
Position (kb)
9
10
11
12 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 8.221 kb on + strand, within Ac3H11_897 at 8.644 kb on + strand at 8.644 kb on + strand at 8.645 kb on - strand at 8.645 kb on - strand at 8.764 kb on + strand at 8.765 kb on - strand at 8.765 kb on - strand at 8.765 kb on - strand at 8.895 kb on - strand at 8.895 kb on - strand at 9.198 kb on + strand at 9.198 kb on + strand at 9.198 kb on + strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.379 kb on + strand at 9.380 kb on - strand at 9.380 kb on - strand at 9.638 kb on + strand, within Ac3H11_899 at 9.638 kb on + strand, within Ac3H11_899 at 9.638 kb on + strand, within Ac3H11_899 at 9.673 kb on + strand, within Ac3H11_899 at 9.766 kb on + strand, within Ac3H11_899 at 9.766 kb on + strand, within Ac3H11_899 at 9.766 kb on + strand, within Ac3H11_899 at 9.767 kb on - strand, within Ac3H11_899 at 9.767 kb on - strand, within Ac3H11_899 at 9.767 kb on - strand, within Ac3H11_899 at 9.833 kb on + strand, within Ac3H11_899 at 9.834 kb on - strand, within Ac3H11_899 at 9.973 kb on + strand, within Ac3H11_899 at 9.973 kb on + strand, within Ac3H11_899 at 9.974 kb on - strand, within Ac3H11_899 at 9.974 kb on - strand, within Ac3H11_899 at 10.018 kb on + strand, within Ac3H11_899 at 10.018 kb on + strand, within Ac3H11_899 at 10.018 kb on + strand, within Ac3H11_899 at 10.019 kb on - strand, within Ac3H11_899 at 10.174 kb on + strand, within Ac3H11_899 at 10.175 kb on - strand, within Ac3H11_899 at 10.175 kb on - strand, within Ac3H11_899 at 10.198 kb on + strand, within Ac3H11_899 at 10.198 kb on + strand, within Ac3H11_899 at 10.199 kb on - strand, within Ac3H11_899 at 10.199 kb on - strand, within Ac3H11_899 at 10.199 kb on - strand, within Ac3H11_899 at 10.232 kb on - strand, within Ac3H11_899 at 10.300 kb on + strand, within Ac3H11_899 at 10.300 kb on + strand, within Ac3H11_899 at 10.300 kb on + strand, within Ac3H11_899 at 10.301 kb on - strand, within Ac3H11_899 at 10.301 kb on - strand, within Ac3H11_899 at 10.301 kb on - strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.429 kb on + strand, within Ac3H11_899 at 10.430 kb on - strand, within Ac3H11_899 at 10.430 kb on - strand, within Ac3H11_899 at 10.591 kb on + strand, within Ac3H11_899 at 10.592 kb on - strand, within Ac3H11_899 at 10.592 kb on - strand, within Ac3H11_899 at 10.592 kb on - strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.792 kb on + strand, within Ac3H11_899 at 10.823 kb on - strand, within Ac3H11_899 at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.222 kb on + strand at 11.223 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 8,221 + Ac3H11_897 0.81 -0.9 8,644 + +1.2 8,644 + -3.3 8,645 - -0.8 8,645 - +3.2 8,764 + -4.2 8,765 - -0.4 8,765 - -1.4 8,765 - -0.1 8,895 - +1.9 8,895 - +0.2 9,198 + +0.3 9,198 + +0.6 9,198 + -0.4 9,199 - -2.9 9,199 - +0.2 9,199 - -0.9 9,199 - +0.8 9,379 + +0.6 9,380 - -0.4 9,380 - -1.5 9,638 + Ac3H11_899 0.22 -1.9 9,638 + Ac3H11_899 0.22 +1.6 9,638 + Ac3H11_899 0.22 -0.0 9,673 + Ac3H11_899 0.23 -2.2 9,766 + Ac3H11_899 0.28 -0.9 9,766 + Ac3H11_899 0.28 -0.9 9,766 + Ac3H11_899 0.28 +0.0 9,767 - Ac3H11_899 0.28 +1.1 9,767 - Ac3H11_899 0.28 +0.2 9,767 - Ac3H11_899 0.28 +1.4 9,833 + Ac3H11_899 0.31 -1.2 9,834 - Ac3H11_899 0.31 +0.7 9,973 + Ac3H11_899 0.38 +0.0 9,973 + Ac3H11_899 0.38 +0.6 9,974 - Ac3H11_899 0.38 +1.8 9,974 - Ac3H11_899 0.38 +2.7 10,018 + Ac3H11_899 0.40 +0.9 10,018 + Ac3H11_899 0.40 -0.6 10,018 + Ac3H11_899 0.40 -0.3 10,019 - Ac3H11_899 0.40 +0.7 10,174 + Ac3H11_899 0.48 +0.6 10,175 - Ac3H11_899 0.48 +1.1 10,175 - Ac3H11_899 0.48 -1.6 10,198 + Ac3H11_899 0.49 -1.3 10,198 + Ac3H11_899 0.49 -2.7 10,199 - Ac3H11_899 0.49 +1.6 10,199 - Ac3H11_899 0.49 +2.6 10,199 - Ac3H11_899 0.49 +1.0 10,232 - Ac3H11_899 0.51 -1.4 10,300 + Ac3H11_899 0.54 -3.0 10,300 + Ac3H11_899 0.54 +0.6 10,300 + Ac3H11_899 0.54 -1.1 10,301 - Ac3H11_899 0.54 +1.4 10,301 - Ac3H11_899 0.54 +2.2 10,301 - Ac3H11_899 0.54 +3.0 10,429 + Ac3H11_899 0.61 -2.2 10,429 + Ac3H11_899 0.61 -2.7 10,429 + Ac3H11_899 0.61 +0.4 10,429 + Ac3H11_899 0.61 +0.2 10,430 - Ac3H11_899 0.61 +1.6 10,430 - Ac3H11_899 0.61 -2.2 10,591 + Ac3H11_899 0.69 +1.5 10,592 - Ac3H11_899 0.69 +0.3 10,592 - Ac3H11_899 0.69 +1.1 10,592 - Ac3H11_899 0.69 +0.2 10,792 + Ac3H11_899 0.79 -1.1 10,792 + Ac3H11_899 0.79 +0.2 10,792 + Ac3H11_899 0.79 +2.4 10,792 + Ac3H11_899 0.79 -2.5 10,823 - Ac3H11_899 0.80 -3.7 11,222 + +1.4 11,222 + +1.9 11,222 + +1.6 11,222 + -0.4 11,222 + +1.5 11,222 + -1.7 11,223 - +2.0
Or see this region's nucleotide sequence