Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4061 and Ac3H11_4062 overlap by 4 nucleotides Ac3H11_4062 and Ac3H11_4063 are separated by 120 nucleotides Ac3H11_4063 and Ac3H11_4064 are separated by 850 nucleotides
Ac3H11_4061 - Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30), at 307,312 to 309,891
_4061
Ac3H11_4062 - Conserved uncharacterized protein CreA, at 309,888 to 310,394
_4062
Ac3H11_4063 - 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain, at 310,515 to 311,162
_4063
Ac3H11_4064 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 312,013 to 313,524
_4064
Position (kb) 310
311
312 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 309.652 kb on + strand at 309.653 kb on - strand at 309.653 kb on - strand at 310.050 kb on + strand, within Ac3H11_4062 at 310.083 kb on + strand, within Ac3H11_4062 at 310.083 kb on + strand, within Ac3H11_4062 at 310.083 kb on + strand, within Ac3H11_4062 at 310.083 kb on + strand, within Ac3H11_4062 at 310.084 kb on - strand, within Ac3H11_4062 at 310.084 kb on - strand, within Ac3H11_4062 at 310.084 kb on - strand, within Ac3H11_4062 at 310.084 kb on - strand, within Ac3H11_4062 at 310.084 kb on - strand, within Ac3H11_4062 at 310.112 kb on + strand, within Ac3H11_4062 at 310.112 kb on + strand, within Ac3H11_4062 at 310.112 kb on + strand, within Ac3H11_4062 at 310.112 kb on + strand, within Ac3H11_4062 at 310.113 kb on - strand, within Ac3H11_4062 at 310.305 kb on + strand, within Ac3H11_4062 at 310.305 kb on + strand, within Ac3H11_4062 at 310.306 kb on - strand, within Ac3H11_4062 at 310.392 kb on + strand at 310.393 kb on - strand at 310.393 kb on - strand at 310.393 kb on - strand at 310.453 kb on - strand at 310.492 kb on + strand at 310.499 kb on + strand at 310.508 kb on + strand at 310.510 kb on + strand at 310.636 kb on + strand, within Ac3H11_4063 at 310.636 kb on + strand, within Ac3H11_4063 at 310.637 kb on - strand, within Ac3H11_4063 at 310.777 kb on + strand, within Ac3H11_4063 at 310.777 kb on + strand, within Ac3H11_4063 at 310.864 kb on + strand, within Ac3H11_4063 at 310.864 kb on + strand, within Ac3H11_4063 at 310.864 kb on + strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.865 kb on - strand, within Ac3H11_4063 at 310.967 kb on - strand, within Ac3H11_4063 at 310.967 kb on - strand, within Ac3H11_4063 at 311.175 kb on + strand at 311.175 kb on + strand at 311.197 kb on + strand at 311.197 kb on + strand at 311.197 kb on + strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.241 kb on + strand at 311.242 kb on - strand at 311.257 kb on + strand at 311.257 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.398 kb on - strand at 311.398 kb on - strand at 311.398 kb on - strand at 311.398 kb on - strand at 311.468 kb on - strand at 311.473 kb on + strand at 311.505 kb on + strand at 311.505 kb on + strand at 311.506 kb on - strand at 311.506 kb on - strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.521 kb on - strand at 311.521 kb on - strand at 311.521 kb on - strand at 311.551 kb on + strand at 311.634 kb on - strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.691 kb on - strand at 311.691 kb on - strand at 311.691 kb on - strand at 311.691 kb on - strand at 311.765 kb on + strand at 311.766 kb on - strand at 311.766 kb on - strand at 311.774 kb on - strand at 311.853 kb on + strand at 311.896 kb on - strand at 311.896 kb on - strand at 311.911 kb on + strand at 311.911 kb on + strand at 311.912 kb on - strand at 311.982 kb on + strand at 311.983 kb on - strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 312.008 kb on + strand at 312.008 kb on + strand at 312.009 kb on - strand at 312.009 kb on - strand at 312.014 kb on + strand at 312.014 kb on + strand at 312.014 kb on + strand at 312.015 kb on - strand at 312.015 kb on - strand at 312.053 kb on + strand at 312.053 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 309,652 + +1.9 309,653 - +1.9 309,653 - +1.1 310,050 + Ac3H11_4062 0.32 -0.6 310,083 + Ac3H11_4062 0.38 +0.7 310,083 + Ac3H11_4062 0.38 -0.7 310,083 + Ac3H11_4062 0.38 -1.0 310,083 + Ac3H11_4062 0.38 -0.2 310,084 - Ac3H11_4062 0.39 -0.5 310,084 - Ac3H11_4062 0.39 +1.1 310,084 - Ac3H11_4062 0.39 +1.7 310,084 - Ac3H11_4062 0.39 +0.3 310,084 - Ac3H11_4062 0.39 -1.2 310,112 + Ac3H11_4062 0.44 -0.3 310,112 + Ac3H11_4062 0.44 -0.2 310,112 + Ac3H11_4062 0.44 -2.0 310,112 + Ac3H11_4062 0.44 +0.5 310,113 - Ac3H11_4062 0.44 +2.0 310,305 + Ac3H11_4062 0.82 -1.3 310,305 + Ac3H11_4062 0.82 -0.1 310,306 - Ac3H11_4062 0.82 +0.4 310,392 + +0.1 310,393 - +0.6 310,393 - -3.6 310,393 - +0.1 310,453 - +3.6 310,492 + +0.2 310,499 + -3.5 310,508 + -1.4 310,510 + -2.6 310,636 + Ac3H11_4063 0.19 -0.2 310,636 + Ac3H11_4063 0.19 -2.8 310,637 - Ac3H11_4063 0.19 +0.7 310,777 + Ac3H11_4063 0.40 +0.0 310,777 + Ac3H11_4063 0.40 +1.3 310,864 + Ac3H11_4063 0.54 -2.4 310,864 + Ac3H11_4063 0.54 -1.2 310,864 + Ac3H11_4063 0.54 -0.3 310,865 - Ac3H11_4063 0.54 -2.4 310,865 - Ac3H11_4063 0.54 -0.5 310,865 - Ac3H11_4063 0.54 -3.1 310,865 - Ac3H11_4063 0.54 +1.0 310,865 - Ac3H11_4063 0.54 +2.3 310,865 - Ac3H11_4063 0.54 -1.6 310,865 - Ac3H11_4063 0.54 +2.6 310,967 - Ac3H11_4063 0.70 +0.4 310,967 - Ac3H11_4063 0.70 +0.0 311,175 + +0.6 311,175 + -0.2 311,197 + -1.4 311,197 + +0.0 311,197 + -0.6 311,198 - -4.0 311,198 - -1.1 311,198 - +0.4 311,198 - +0.4 311,198 - +0.4 311,241 + -0.9 311,242 - +1.4 311,257 + -0.9 311,257 + +1.8 311,268 + +1.6 311,268 + +0.8 311,268 + -2.3 311,268 + -1.3 311,268 + -1.7 311,268 + +0.4 311,268 + +0.2 311,268 + +0.9 311,269 - -2.9 311,269 - -2.1 311,269 - -3.1 311,269 - -1.9 311,269 - -1.7 311,269 - +0.2 311,270 + -1.1 311,270 + -0.6 311,270 + -3.3 311,270 + +1.9 311,270 + -2.3 311,270 + -1.1 311,270 + +0.3 311,270 + -0.1 311,270 + +0.8 311,271 - -1.6 311,271 - -0.4 311,271 - -4.1 311,271 - -1.4 311,271 - +1.4 311,271 - +0.2 311,271 - -1.9 311,271 - -0.2 311,271 - -0.4 311,271 - +0.0 311,271 - +2.6 311,397 + +0.6 311,397 + +0.4 311,397 + +1.1 311,397 + -0.4 311,397 + -0.9 311,397 + -1.6 311,397 + +1.4 311,397 + -0.7 311,397 + +1.3 311,398 - -3.7 311,398 - -3.0 311,398 - -0.0 311,398 - -1.7 311,468 - -0.2 311,473 + +0.8 311,505 + +1.4 311,505 + +0.5 311,506 - -0.4 311,506 - +1.1 311,520 + -1.1 311,520 + +1.4 311,520 + -0.4 311,520 + +0.4 311,520 + -2.5 311,520 + +0.3 311,521 - -0.3 311,521 - +0.5 311,521 - -2.6 311,551 + +1.4 311,634 - -0.4 311,690 + +1.8 311,690 + +1.3 311,690 + -0.4 311,690 + -0.9 311,690 + +0.2 311,691 - +0.3 311,691 - -0.5 311,691 - -0.3 311,691 - -2.6 311,765 + +0.3 311,766 - +1.5 311,766 - +0.4 311,774 - -1.9 311,853 + +0.7 311,896 - -0.2 311,896 - -1.3 311,911 + +0.6 311,911 + +3.0 311,912 - -2.9 311,982 + -1.8 311,983 - +1.2 311,990 + -1.1 311,990 + +0.6 311,990 + +1.0 311,990 + +0.4 311,990 + -2.6 311,991 - -0.6 311,991 - +1.0 311,991 - -0.9 311,991 - +0.9 311,991 - +0.3 311,991 - -0.9 312,008 + -0.9 312,008 + -2.3 312,009 - -0.0 312,009 - +3.2 312,014 + -1.4 312,014 + +0.6 312,014 + +0.4 312,015 - +2.5 312,015 - +1.8 312,053 + -0.4 312,053 + -0.0
Or see this region's nucleotide sequence