Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3949 and Ac3H11_3950 are separated by 133 nucleotides Ac3H11_3950 and Ac3H11_3951 are separated by 77 nucleotides
Ac3H11_3949 - Outer membrane stress sensor protease DegS, at 172,121 to 173,644
_3949
Ac3H11_3950 - Catalase (EC 1.11.1.6), at 173,778 to 174,767
_3950
Ac3H11_3951 - Aldose 1-epimerase (EC 5.1.3.3), at 174,845 to 175,957
_3951
Position (kb) 173
174
175 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 172.800 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 173.310 kb on + strand, within Ac3H11_3949 at 173.650 kb on + strand at 173.650 kb on + strand at 173.651 kb on - strand at 173.651 kb on - strand at 173.652 kb on + strand at 173.652 kb on + strand at 173.652 kb on + strand at 173.652 kb on + strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.701 kb on + strand at 173.712 kb on + strand at 173.813 kb on - strand at 173.965 kb on + strand, within Ac3H11_3950 at 173.965 kb on + strand, within Ac3H11_3950 at 173.966 kb on - strand, within Ac3H11_3950 at 174.529 kb on + strand, within Ac3H11_3950 at 174.754 kb on + strand at 174.754 kb on + strand at 174.755 kb on - strand at 174.755 kb on - strand at 174.755 kb on - strand at 174.847 kb on - strand at 174.847 kb on - strand at 174.864 kb on + strand at 175.053 kb on + strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.200 kb on + strand, within Ac3H11_3951 at 175.201 kb on - strand, within Ac3H11_3951 at 175.201 kb on - strand, within Ac3H11_3951 at 175.347 kb on + strand, within Ac3H11_3951 at 175.348 kb on - strand, within Ac3H11_3951 at 175.362 kb on - strand, within Ac3H11_3951 at 175.456 kb on + strand, within Ac3H11_3951 at 175.761 kb on + strand, within Ac3H11_3951
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 172,800 + Ac3H11_3949 0.45 +0.5 172,818 + Ac3H11_3949 0.46 -2.2 172,818 + Ac3H11_3949 0.46 -2.8 172,818 + Ac3H11_3949 0.46 +0.7 172,818 + Ac3H11_3949 0.46 -0.9 172,818 + Ac3H11_3949 0.46 -1.4 172,819 - Ac3H11_3949 0.46 -1.4 172,819 - Ac3H11_3949 0.46 +0.8 172,819 - Ac3H11_3949 0.46 +2.3 172,819 - Ac3H11_3949 0.46 +0.2 173,310 + Ac3H11_3949 0.78 +1.1 173,650 + +1.5 173,650 + -1.7 173,651 - +2.0 173,651 - +1.8 173,652 + +0.3 173,652 + -0.0 173,652 + +0.3 173,652 + +2.2 173,653 - -0.5 173,653 - +1.3 173,653 - +0.9 173,653 - +0.8 173,653 - +1.2 173,653 - -0.1 173,653 - -0.5 173,653 - +0.3 173,701 + +2.2 173,712 + +1.2 173,813 - -3.0 173,965 + Ac3H11_3950 0.19 +1.8 173,965 + Ac3H11_3950 0.19 -2.0 173,966 - Ac3H11_3950 0.19 -2.6 174,529 + Ac3H11_3950 0.76 +0.6 174,754 + -1.0 174,754 + +0.8 174,755 - -0.7 174,755 - +0.8 174,755 - +0.8 174,847 - -0.5 174,847 - +1.0 174,864 + -0.4 175,053 + Ac3H11_3951 0.19 -0.1 175,054 - Ac3H11_3951 0.19 +0.6 175,054 - Ac3H11_3951 0.19 +2.1 175,054 - Ac3H11_3951 0.19 +0.2 175,054 - Ac3H11_3951 0.19 +0.2 175,200 + Ac3H11_3951 0.32 +1.6 175,201 - Ac3H11_3951 0.32 +1.3 175,201 - Ac3H11_3951 0.32 -0.7 175,347 + Ac3H11_3951 0.45 -1.3 175,348 - Ac3H11_3951 0.45 +1.1 175,362 - Ac3H11_3951 0.46 -1.3 175,456 + Ac3H11_3951 0.55 -0.9 175,761 + Ac3H11_3951 0.82 +2.2
Or see this region's nucleotide sequence