Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3872 and Ac3H11_3873 are separated by 29 nucleotides Ac3H11_3873 and Ac3H11_3874 overlap by 4 nucleotides
Ac3H11_3872 - PspA, at 88,060 to 89,778
_3872
Ac3H11_3873 - Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-), at 89,808 to 90,491
_3873
Ac3H11_3874 - FIG015287: Zinc protease, at 90,488 to 91,837
_3874
Position (kb) 89
90
91 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 88.894 kb on + strand, within Ac3H11_3872 at 88.894 kb on + strand, within Ac3H11_3872 at 88.895 kb on - strand, within Ac3H11_3872 at 88.903 kb on + strand, within Ac3H11_3872 at 88.904 kb on - strand, within Ac3H11_3872 at 88.940 kb on - strand, within Ac3H11_3872 at 89.056 kb on + strand, within Ac3H11_3872 at 89.057 kb on - strand, within Ac3H11_3872 at 89.057 kb on - strand, within Ac3H11_3872 at 89.057 kb on - strand, within Ac3H11_3872 at 89.081 kb on - strand, within Ac3H11_3872 at 89.081 kb on - strand, within Ac3H11_3872 at 89.152 kb on + strand, within Ac3H11_3872 at 89.152 kb on + strand, within Ac3H11_3872 at 89.152 kb on + strand, within Ac3H11_3872 at 89.153 kb on - strand, within Ac3H11_3872 at 89.153 kb on - strand, within Ac3H11_3872 at 89.153 kb on - strand, within Ac3H11_3872 at 89.153 kb on - strand, within Ac3H11_3872 at 89.282 kb on + strand, within Ac3H11_3872 at 89.283 kb on - strand, within Ac3H11_3872 at 89.334 kb on + strand, within Ac3H11_3872 at 89.334 kb on + strand, within Ac3H11_3872 at 89.497 kb on + strand, within Ac3H11_3872 at 89.497 kb on + strand, within Ac3H11_3872 at 89.497 kb on + strand, within Ac3H11_3872 at 89.498 kb on - strand, within Ac3H11_3872 at 89.498 kb on - strand, within Ac3H11_3872 at 89.498 kb on - strand, within Ac3H11_3872 at 89.498 kb on - strand, within Ac3H11_3872 at 89.498 kb on - strand, within Ac3H11_3872 at 89.498 kb on - strand, within Ac3H11_3872 at 89.656 kb on + strand at 89.656 kb on + strand at 89.656 kb on + strand at 89.656 kb on + strand at 89.656 kb on + strand at 89.656 kb on + strand at 89.656 kb on + strand at 89.656 kb on + strand at 89.657 kb on - strand at 89.920 kb on + strand, within Ac3H11_3873 at 89.921 kb on - strand, within Ac3H11_3873 at 90.499 kb on + strand at 90.499 kb on + strand at 90.500 kb on - strand at 90.500 kb on - strand at 90.500 kb on - strand at 90.500 kb on - strand at 90.500 kb on - strand at 90.506 kb on + strand at 90.506 kb on + strand at 90.507 kb on - strand at 90.507 kb on - strand at 90.609 kb on + strand at 90.609 kb on + strand at 90.855 kb on + strand, within Ac3H11_3874 at 90.855 kb on + strand, within Ac3H11_3874 at 90.856 kb on - strand, within Ac3H11_3874 at 90.856 kb on - strand, within Ac3H11_3874 at 90.861 kb on + strand, within Ac3H11_3874 at 90.862 kb on - strand, within Ac3H11_3874 at 90.862 kb on - strand, within Ac3H11_3874 at 90.870 kb on + strand, within Ac3H11_3874 at 90.870 kb on + strand, within Ac3H11_3874 at 90.871 kb on - strand, within Ac3H11_3874 at 91.272 kb on + strand, within Ac3H11_3874 at 91.288 kb on - strand, within Ac3H11_3874 at 91.288 kb on - strand, within Ac3H11_3874 at 91.477 kb on - strand, within Ac3H11_3874
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 88,894 + Ac3H11_3872 0.49 -1.8 88,894 + Ac3H11_3872 0.49 -2.3 88,895 - Ac3H11_3872 0.49 -1.4 88,903 + Ac3H11_3872 0.49 +2.5 88,904 - Ac3H11_3872 0.49 -1.5 88,940 - Ac3H11_3872 0.51 -1.9 89,056 + Ac3H11_3872 0.58 -1.3 89,057 - Ac3H11_3872 0.58 -2.0 89,057 - Ac3H11_3872 0.58 -1.1 89,057 - Ac3H11_3872 0.58 -1.1 89,081 - Ac3H11_3872 0.59 +1.5 89,081 - Ac3H11_3872 0.59 -1.5 89,152 + Ac3H11_3872 0.64 +0.2 89,152 + Ac3H11_3872 0.64 -2.2 89,152 + Ac3H11_3872 0.64 -0.3 89,153 - Ac3H11_3872 0.64 +1.4 89,153 - Ac3H11_3872 0.64 -1.3 89,153 - Ac3H11_3872 0.64 +1.7 89,153 - Ac3H11_3872 0.64 -3.4 89,282 + Ac3H11_3872 0.71 +1.8 89,283 - Ac3H11_3872 0.71 -0.2 89,334 + Ac3H11_3872 0.74 +0.8 89,334 + Ac3H11_3872 0.74 +0.3 89,497 + Ac3H11_3872 0.84 +0.2 89,497 + Ac3H11_3872 0.84 -3.0 89,497 + Ac3H11_3872 0.84 -0.5 89,498 - Ac3H11_3872 0.84 -1.0 89,498 - Ac3H11_3872 0.84 -1.7 89,498 - Ac3H11_3872 0.84 -1.1 89,498 - Ac3H11_3872 0.84 -1.3 89,498 - Ac3H11_3872 0.84 -0.8 89,498 - Ac3H11_3872 0.84 -2.9 89,656 + -1.2 89,656 + -3.9 89,656 + -0.9 89,656 + -2.5 89,656 + +0.9 89,656 + -0.6 89,656 + +0.5 89,656 + +2.0 89,657 - +0.9 89,920 + Ac3H11_3873 0.16 -1.5 89,921 - Ac3H11_3873 0.17 +0.5 90,499 + -2.5 90,499 + +0.9 90,500 - +1.5 90,500 - +0.1 90,500 - +0.9 90,500 - +0.3 90,500 - +1.6 90,506 + -0.2 90,506 + -2.4 90,507 - -0.7 90,507 - -1.6 90,609 + +0.3 90,609 + +0.1 90,855 + Ac3H11_3874 0.27 +0.6 90,855 + Ac3H11_3874 0.27 +2.3 90,856 - Ac3H11_3874 0.27 +0.9 90,856 - Ac3H11_3874 0.27 -2.4 90,861 + Ac3H11_3874 0.28 +1.0 90,862 - Ac3H11_3874 0.28 -2.7 90,862 - Ac3H11_3874 0.28 -0.5 90,870 + Ac3H11_3874 0.28 +1.8 90,870 + Ac3H11_3874 0.28 -2.5 90,871 - Ac3H11_3874 0.28 +0.8 91,272 + Ac3H11_3874 0.58 -1.7 91,288 - Ac3H11_3874 0.59 -1.0 91,288 - Ac3H11_3874 0.59 +2.9 91,477 - Ac3H11_3874 0.73 +0.8
Or see this region's nucleotide sequence