Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3800 and Ac3H11_3801 are separated by 8 nucleotides Ac3H11_3801 and Ac3H11_3802 overlap by 4 nucleotides Ac3H11_3802 and Ac3H11_3803 are separated by 23 nucleotides
Ac3H11_3800 - Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2), at 11,386 to 12,600
_3800
Ac3H11_3801 - putative lipoprotein, at 12,609 to 12,848
_3801
Ac3H11_3802 - Formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); Putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2), at 12,845 to 13,462
_3802
Ac3H11_3803 - Formate dehydrogenase-O, major subunit (EC 1.2.1.2), at 13,486 to 16,455
_3803
Position (kb) 12
13 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 11.942 kb on + strand, within Ac3H11_3800 at 11.942 kb on + strand, within Ac3H11_3800 at 11.942 kb on + strand, within Ac3H11_3800 at 11.942 kb on + strand, within Ac3H11_3800 at 11.942 kb on + strand, within Ac3H11_3800 at 11.942 kb on + strand, within Ac3H11_3800 at 11.942 kb on + strand, within Ac3H11_3800 at 11.943 kb on - strand, within Ac3H11_3800 at 11.943 kb on - strand, within Ac3H11_3800 at 12.146 kb on + strand, within Ac3H11_3800 at 12.146 kb on + strand, within Ac3H11_3800 at 12.146 kb on + strand, within Ac3H11_3800 at 12.248 kb on + strand at 12.326 kb on + strand, within Ac3H11_3800 at 12.326 kb on + strand, within Ac3H11_3800 at 12.327 kb on - strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.416 kb on + strand, within Ac3H11_3800 at 12.417 kb on - strand, within Ac3H11_3800 at 12.417 kb on - strand, within Ac3H11_3800 at 12.417 kb on - strand, within Ac3H11_3800 at 12.417 kb on - strand, within Ac3H11_3800 at 12.417 kb on - strand, within Ac3H11_3800 at 12.417 kb on - strand, within Ac3H11_3800 at 12.631 kb on + strand at 12.631 kb on + strand at 12.631 kb on + strand at 12.631 kb on + strand at 12.647 kb on - strand, within Ac3H11_3801 at 12.647 kb on - strand, within Ac3H11_3801 at 12.736 kb on + strand, within Ac3H11_3801 at 12.737 kb on - strand, within Ac3H11_3801 at 12.889 kb on - strand at 12.889 kb on - strand at 12.889 kb on - strand at 12.889 kb on - strand at 13.050 kb on + strand, within Ac3H11_3802 at 13.051 kb on - strand, within Ac3H11_3802 at 13.051 kb on - strand, within Ac3H11_3802 at 13.179 kb on + strand, within Ac3H11_3802 at 13.179 kb on + strand, within Ac3H11_3802 at 13.179 kb on + strand, within Ac3H11_3802 at 13.180 kb on - strand, within Ac3H11_3802 at 13.180 kb on - strand, within Ac3H11_3802 at 13.180 kb on - strand, within Ac3H11_3802 at 13.188 kb on + strand, within Ac3H11_3802 at 13.188 kb on + strand, within Ac3H11_3802 at 13.188 kb on + strand, within Ac3H11_3802 at 13.189 kb on - strand, within Ac3H11_3802 at 13.245 kb on + strand, within Ac3H11_3802 at 13.245 kb on + strand, within Ac3H11_3802 at 13.246 kb on - strand, within Ac3H11_3802 at 13.246 kb on - strand, within Ac3H11_3802 at 13.246 kb on - strand, within Ac3H11_3802 at 13.548 kb on - strand at 13.548 kb on - strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.553 kb on + strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.554 kb on - strand at 13.610 kb on + strand at 13.611 kb on - strand at 13.611 kb on - strand at 13.611 kb on - strand at 13.611 kb on - strand at 13.613 kb on + strand at 13.613 kb on + strand at 13.614 kb on - strand at 13.614 kb on - strand at 13.614 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 11,942 + Ac3H11_3800 0.46 +0.3 11,942 + Ac3H11_3800 0.46 +1.7 11,942 + Ac3H11_3800 0.46 -0.8 11,942 + Ac3H11_3800 0.46 -0.4 11,942 + Ac3H11_3800 0.46 +0.1 11,942 + Ac3H11_3800 0.46 +1.3 11,942 + Ac3H11_3800 0.46 -0.4 11,943 - Ac3H11_3800 0.46 -1.4 11,943 - Ac3H11_3800 0.46 +1.4 12,146 + Ac3H11_3800 0.63 -2.4 12,146 + Ac3H11_3800 0.63 -0.4 12,146 + Ac3H11_3800 0.63 +1.2 12,248 + +2.5 12,326 + Ac3H11_3800 0.77 +1.1 12,326 + Ac3H11_3800 0.77 -1.3 12,327 - Ac3H11_3800 0.77 +0.9 12,416 + Ac3H11_3800 0.85 +0.6 12,416 + Ac3H11_3800 0.85 -0.1 12,416 + Ac3H11_3800 0.85 -0.1 12,416 + Ac3H11_3800 0.85 +1.3 12,416 + Ac3H11_3800 0.85 -2.0 12,416 + Ac3H11_3800 0.85 -0.4 12,416 + Ac3H11_3800 0.85 -2.0 12,417 - Ac3H11_3800 0.85 +0.3 12,417 - Ac3H11_3800 0.85 +1.3 12,417 - Ac3H11_3800 0.85 -1.5 12,417 - Ac3H11_3800 0.85 +0.8 12,417 - Ac3H11_3800 0.85 +0.4 12,417 - Ac3H11_3800 0.85 +0.9 12,631 + -0.5 12,631 + -1.2 12,631 + +2.2 12,631 + +0.7 12,647 - Ac3H11_3801 0.16 +0.1 12,647 - Ac3H11_3801 0.16 +0.7 12,736 + Ac3H11_3801 0.53 +0.5 12,737 - Ac3H11_3801 0.53 +0.9 12,889 - -2.9 12,889 - -1.9 12,889 - +0.7 12,889 - -1.0 13,050 + Ac3H11_3802 0.33 +1.5 13,051 - Ac3H11_3802 0.33 -3.3 13,051 - Ac3H11_3802 0.33 +0.8 13,179 + Ac3H11_3802 0.54 -3.0 13,179 + Ac3H11_3802 0.54 -0.7 13,179 + Ac3H11_3802 0.54 +0.0 13,180 - Ac3H11_3802 0.54 -2.6 13,180 - Ac3H11_3802 0.54 +0.9 13,180 - Ac3H11_3802 0.54 -2.9 13,188 + Ac3H11_3802 0.56 -3.1 13,188 + Ac3H11_3802 0.56 +0.6 13,188 + Ac3H11_3802 0.56 -0.8 13,189 - Ac3H11_3802 0.56 -1.1 13,245 + Ac3H11_3802 0.65 -1.2 13,245 + Ac3H11_3802 0.65 -0.4 13,246 - Ac3H11_3802 0.65 +0.0 13,246 - Ac3H11_3802 0.65 -2.9 13,246 - Ac3H11_3802 0.65 +2.5 13,548 - -0.5 13,548 - -2.3 13,553 + +1.0 13,553 + +0.7 13,553 + +0.6 13,553 + -0.2 13,553 + -2.7 13,553 + +3.2 13,553 + +1.3 13,553 + -1.3 13,554 - +2.0 13,554 - -2.0 13,554 - +0.5 13,554 - -3.1 13,554 - +0.1 13,554 - -1.1 13,554 - -1.5 13,554 - +0.7 13,554 - +1.5 13,554 - +0.2 13,554 - +0.8 13,554 - +0.0 13,554 - +1.5 13,610 + +0.4 13,611 - -0.0 13,611 - -0.2 13,611 - -3.0 13,611 - -1.6 13,613 + +0.8 13,613 + -1.1 13,614 - +0.9 13,614 - -2.0 13,614 - -2.4
Or see this region's nucleotide sequence