Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3762 and Ac3H11_3763 overlap by 4 nucleotides Ac3H11_3763 and Ac3H11_3764 are separated by 21 nucleotides Ac3H11_3764 and Ac3H11_3765 are separated by 50 nucleotides
Ac3H11_3762 - Eha, at 13,972 to 15,165
_3762
Ac3H11_3763 - Phage transposase, at 15,162 to 16,940
_3763
Ac3H11_3764 - Phage protein, at 16,962 to 17,843
_3764
Ac3H11_3765 - Transcriptional regulator, IclR family, at 17,894 to 18,232
_3765
Position (kb) 15
16
17 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 14.168 kb on + strand, within Ac3H11_3762 at 14.168 kb on + strand, within Ac3H11_3762 at 14.168 kb on + strand, within Ac3H11_3762 at 14.364 kb on + strand, within Ac3H11_3762 at 14.604 kb on - strand, within Ac3H11_3762 at 14.866 kb on + strand, within Ac3H11_3762 at 15.787 kb on + strand, within Ac3H11_3763 at 15.787 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.276 kb on + strand, within Ac3H11_3763 at 16.343 kb on + strand, within Ac3H11_3763 at 16.433 kb on - strand, within Ac3H11_3763 at 16.540 kb on + strand, within Ac3H11_3763 at 16.541 kb on - strand, within Ac3H11_3763 at 16.852 kb on + strand at 16.852 kb on + strand at 16.963 kb on + strand at 17.124 kb on + strand, within Ac3H11_3764 at 17.246 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.736 kb on + strand, within Ac3H11_3764 at 17.737 kb on - strand, within Ac3H11_3764 at 17.737 kb on - strand, within Ac3H11_3764 at 17.847 kb on + strand at 17.847 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 14,168 + Ac3H11_3762 0.16 +0.8 14,168 + Ac3H11_3762 0.16 -2.6 14,168 + Ac3H11_3762 0.16 -2.3 14,364 + Ac3H11_3762 0.33 +1.9 14,604 - Ac3H11_3762 0.53 -3.4 14,866 + Ac3H11_3762 0.75 -1.4 15,787 + Ac3H11_3763 0.35 -0.6 15,787 + Ac3H11_3763 0.35 -2.1 16,276 + Ac3H11_3763 0.63 +0.4 16,276 + Ac3H11_3763 0.63 -0.2 16,276 + Ac3H11_3763 0.63 -2.3 16,343 + Ac3H11_3763 0.66 +0.6 16,433 - Ac3H11_3763 0.71 +0.8 16,540 + Ac3H11_3763 0.77 +2.3 16,541 - Ac3H11_3763 0.78 +0.5 16,852 + +0.7 16,852 + -0.1 16,963 + +3.1 17,124 + Ac3H11_3764 0.18 +2.3 17,246 + Ac3H11_3764 0.32 -0.7 17,736 + Ac3H11_3764 0.88 +1.0 17,736 + Ac3H11_3764 0.88 +0.5 17,736 + Ac3H11_3764 0.88 -1.3 17,736 + Ac3H11_3764 0.88 -1.6 17,737 - Ac3H11_3764 0.88 -1.8 17,737 - Ac3H11_3764 0.88 -1.9 17,847 + -1.1 17,847 + +1.4
Or see this region's nucleotide sequence