Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3703 and Ac3H11_3704 are separated by 20 nucleotides Ac3H11_3704 and Ac3H11_3705 overlap by 4 nucleotides
Ac3H11_3703 - Urea ABC transporter, permease protein UrtB, at 61,960 to 63,543
_3703
Ac3H11_3704 - Urea ABC transporter, permease protein UrtC, at 63,564 to 64,703
_3704
Ac3H11_3705 - Urea ABC transporter, ATPase protein UrtD, at 64,700 to 65,575
_3705
Position (kb) 63
64
65 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 62.791 kb on + strand, within Ac3H11_3703 at 62.791 kb on + strand, within Ac3H11_3703 at 62.791 kb on + strand, within Ac3H11_3703 at 62.792 kb on - strand, within Ac3H11_3703 at 62.792 kb on - strand, within Ac3H11_3703 at 62.792 kb on - strand, within Ac3H11_3703 at 62.842 kb on + strand, within Ac3H11_3703 at 63.082 kb on + strand, within Ac3H11_3703 at 63.136 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.328 kb on + strand, within Ac3H11_3703 at 63.329 kb on - strand, within Ac3H11_3703 at 63.356 kb on + strand, within Ac3H11_3703 at 63.357 kb on - strand, within Ac3H11_3703 at 63.391 kb on + strand at 63.391 kb on + strand at 63.392 kb on - strand at 63.570 kb on - strand at 63.727 kb on - strand, within Ac3H11_3704 at 63.759 kb on + strand, within Ac3H11_3704 at 63.760 kb on - strand, within Ac3H11_3704 at 63.760 kb on - strand, within Ac3H11_3704 at 63.799 kb on - strand, within Ac3H11_3704 at 63.799 kb on - strand, within Ac3H11_3704 at 63.849 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand, within Ac3H11_3704 at 63.864 kb on + strand at 63.864 kb on + strand, within Ac3H11_3704 at 63.865 kb on - strand, within Ac3H11_3704 at 63.865 kb on - strand, within Ac3H11_3704 at 63.897 kb on + strand, within Ac3H11_3704 at 63.898 kb on - strand, within Ac3H11_3704 at 63.898 kb on - strand, within Ac3H11_3704 at 64.068 kb on + strand, within Ac3H11_3704 at 64.069 kb on - strand, within Ac3H11_3704 at 64.069 kb on - strand, within Ac3H11_3704 at 64.341 kb on + strand, within Ac3H11_3704 at 64.357 kb on - strand, within Ac3H11_3704 at 64.357 kb on - strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.413 kb on + strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.414 kb on - strand, within Ac3H11_3704 at 64.590 kb on + strand at 64.591 kb on - strand at 65.561 kb on + strand at 65.561 kb on + strand at 65.562 kb on - strand at 65.562 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 62,791 + Ac3H11_3703 0.52 +0.7 62,791 + Ac3H11_3703 0.52 +2.2 62,791 + Ac3H11_3703 0.52 +0.5 62,792 - Ac3H11_3703 0.53 -2.2 62,792 - Ac3H11_3703 0.53 +1.1 62,792 - Ac3H11_3703 0.53 +1.6 62,842 + Ac3H11_3703 0.56 +0.1 63,082 + Ac3H11_3703 0.71 +2.2 63,136 + Ac3H11_3703 0.74 -1.1 63,328 + Ac3H11_3703 0.86 +1.5 63,328 + Ac3H11_3703 0.86 +0.4 63,328 + Ac3H11_3703 0.86 +1.7 63,328 + Ac3H11_3703 0.86 +0.4 63,329 - Ac3H11_3703 0.86 -1.6 63,356 + Ac3H11_3703 0.88 +1.8 63,357 - Ac3H11_3703 0.88 +1.7 63,391 + -2.7 63,391 + -0.4 63,392 - -3.7 63,570 - +0.1 63,727 - Ac3H11_3704 0.14 -1.3 63,759 + Ac3H11_3704 0.17 +0.7 63,760 - Ac3H11_3704 0.17 -1.5 63,760 - Ac3H11_3704 0.17 -0.3 63,799 - Ac3H11_3704 0.21 +1.4 63,799 - Ac3H11_3704 0.21 +0.4 63,849 + Ac3H11_3704 0.25 -1.5 63,864 + Ac3H11_3704 0.26 -0.7 63,864 + Ac3H11_3704 0.26 -0.8 63,864 + Ac3H11_3704 0.26 -0.0 63,864 + Ac3H11_3704 0.26 -2.9 63,864 + Ac3H11_3704 0.26 -2.3 63,864 + +2.6 63,864 + Ac3H11_3704 0.26 +0.4 63,865 - Ac3H11_3704 0.26 -0.6 63,865 - Ac3H11_3704 0.26 +0.2 63,897 + Ac3H11_3704 0.29 +1.8 63,898 - Ac3H11_3704 0.29 +3.2 63,898 - Ac3H11_3704 0.29 +1.0 64,068 + Ac3H11_3704 0.44 -2.2 64,069 - Ac3H11_3704 0.44 -0.4 64,069 - Ac3H11_3704 0.44 -2.2 64,341 + Ac3H11_3704 0.68 -1.4 64,357 - Ac3H11_3704 0.70 -0.7 64,357 - Ac3H11_3704 0.70 -2.7 64,413 + Ac3H11_3704 0.74 +0.4 64,413 + Ac3H11_3704 0.74 -0.7 64,413 + Ac3H11_3704 0.74 +0.8 64,413 + Ac3H11_3704 0.74 -0.5 64,414 - Ac3H11_3704 0.75 +0.6 64,414 - Ac3H11_3704 0.75 +0.4 64,414 - Ac3H11_3704 0.75 +0.3 64,414 - Ac3H11_3704 0.75 -4.2 64,414 - Ac3H11_3704 0.75 +0.0 64,414 - Ac3H11_3704 0.75 +1.2 64,590 + -3.8 64,591 - +1.1 65,561 + -1.7 65,561 + -1.8 65,562 - +0.7 65,562 - -1.2
Or see this region's nucleotide sequence