Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3611 and Ac3H11_3612 are separated by 10 nucleotides Ac3H11_3612 and Ac3H11_3613 overlap by 4 nucleotides
Ac3H11_3611 - Monooxygenase, flavin-binding family, at 163,462 to 164,796
_3611
Ac3H11_3612 - Na(+) dependent transporter,Sodium Bile acid symporter family, at 164,807 to 165,742
_3612
Ac3H11_3613 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 165,739 to 166,749
_3613
Position (kb) 164
165
166 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 163.997 kb on - strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.087 kb on - strand, within Ac3H11_3611 at 164.122 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.126 kb on - strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.141 kb on - strand, within Ac3H11_3611 at 164.141 kb on - strand at 164.141 kb on - strand, within Ac3H11_3611 at 164.276 kb on - strand, within Ac3H11_3611 at 164.284 kb on + strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.414 kb on - strand, within Ac3H11_3611 at 164.441 kb on - strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.453 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.591 kb on - strand, within Ac3H11_3611 at 164.711 kb on - strand at 164.734 kb on + strand at 164.735 kb on - strand at 164.737 kb on + strand at 164.737 kb on + strand at 164.737 kb on + strand at 164.738 kb on - strand at 164.738 kb on - strand at 164.756 kb on - strand at 164.826 kb on + strand at 164.826 kb on + strand at 164.827 kb on - strand at 165.036 kb on + strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.525 kb on - strand, within Ac3H11_3612 at 165.901 kb on + strand, within Ac3H11_3613 at 165.902 kb on - strand, within Ac3H11_3613 at 166.024 kb on + strand, within Ac3H11_3613 at 166.189 kb on + strand, within Ac3H11_3613
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 163,997 - Ac3H11_3611 0.40 +0.3 164,086 + Ac3H11_3611 0.47 +1.6 164,086 + Ac3H11_3611 0.47 +0.2 164,087 - Ac3H11_3611 0.47 -1.5 164,122 + Ac3H11_3611 0.49 +1.3 164,125 + Ac3H11_3611 0.50 -1.8 164,125 + Ac3H11_3611 0.50 -3.2 164,125 + Ac3H11_3611 0.50 +2.7 164,125 + Ac3H11_3611 0.50 +0.8 164,125 + Ac3H11_3611 0.50 +1.4 164,126 - Ac3H11_3611 0.50 -0.5 164,140 + Ac3H11_3611 0.51 -2.7 164,140 + Ac3H11_3611 0.51 +1.1 164,140 + Ac3H11_3611 0.51 +3.3 164,140 + Ac3H11_3611 0.51 +1.2 164,140 + Ac3H11_3611 0.51 +0.1 164,140 + Ac3H11_3611 0.51 -0.5 164,141 - Ac3H11_3611 0.51 +0.1 164,141 - -0.1 164,141 - Ac3H11_3611 0.51 -0.5 164,276 - Ac3H11_3611 0.61 -1.1 164,284 + Ac3H11_3611 0.62 -0.4 164,285 - Ac3H11_3611 0.62 +1.5 164,285 - Ac3H11_3611 0.62 +0.3 164,285 - Ac3H11_3611 0.62 +1.8 164,285 - Ac3H11_3611 0.62 +0.9 164,413 + Ac3H11_3611 0.71 +0.8 164,413 + Ac3H11_3611 0.71 -0.4 164,414 - Ac3H11_3611 0.71 +0.7 164,441 - Ac3H11_3611 0.73 +1.1 164,452 + Ac3H11_3611 0.74 -0.4 164,452 + Ac3H11_3611 0.74 +0.2 164,453 - Ac3H11_3611 0.74 +0.4 164,507 - Ac3H11_3611 0.78 +1.5 164,507 - Ac3H11_3611 0.78 -2.2 164,507 - Ac3H11_3611 0.78 +1.6 164,591 - Ac3H11_3611 0.85 +1.4 164,711 - +0.3 164,734 + +0.5 164,735 - -1.9 164,737 + -0.2 164,737 + +0.4 164,737 + +1.5 164,738 - +0.6 164,738 - -1.0 164,756 - -4.1 164,826 + -3.0 164,826 + -0.3 164,827 - -2.0 165,036 + Ac3H11_3612 0.24 +1.5 165,037 - Ac3H11_3612 0.25 +0.7 165,037 - Ac3H11_3612 0.25 -2.2 165,037 - Ac3H11_3612 0.25 -0.6 165,432 - Ac3H11_3612 0.67 +1.3 165,432 - Ac3H11_3612 0.67 +0.2 165,432 - Ac3H11_3612 0.67 -2.3 165,432 - Ac3H11_3612 0.67 -1.3 165,525 - Ac3H11_3612 0.77 +1.5 165,901 + Ac3H11_3613 0.16 +1.2 165,902 - Ac3H11_3613 0.16 +0.3 166,024 + Ac3H11_3613 0.28 +1.7 166,189 + Ac3H11_3613 0.45 +0.8
Or see this region's nucleotide sequence