Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3607 and Ac3H11_3608 are separated by 137 nucleotides Ac3H11_3608 and Ac3H11_3609 are separated by 30 nucleotides Ac3H11_3609 and Ac3H11_3610 are separated by 90 nucleotides
Ac3H11_3607 - Metallo-beta-lactamase superfamily protein, at 160,272 to 161,240
_3607
Ac3H11_3608 - hypothetical protein, at 161,378 to 161,746
_3608
Ac3H11_3609 - Transcriptional regulator, IclR family, at 161,777 to 162,529
_3609
Ac3H11_3610 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 162,620 to 163,465
_3610
Position (kb) 161
162 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 160.492 kb on + strand, within Ac3H11_3607 at 160.492 kb on + strand, within Ac3H11_3607 at 160.493 kb on - strand, within Ac3H11_3607 at 160.493 kb on - strand, within Ac3H11_3607 at 160.493 kb on - strand, within Ac3H11_3607 at 160.552 kb on + strand, within Ac3H11_3607 at 160.802 kb on - strand, within Ac3H11_3607 at 160.954 kb on + strand, within Ac3H11_3607 at 160.955 kb on - strand, within Ac3H11_3607 at 160.969 kb on + strand, within Ac3H11_3607 at 160.969 kb on + strand, within Ac3H11_3607 at 160.970 kb on - strand, within Ac3H11_3607 at 160.970 kb on - strand, within Ac3H11_3607 at 161.191 kb on + strand at 161.557 kb on - strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.693 kb on - strand, within Ac3H11_3608 at 161.718 kb on + strand at 161.734 kb on - strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.763 kb on + strand at 161.778 kb on + strand at 161.779 kb on - strand at 161.779 kb on - strand at 161.835 kb on - strand at 161.835 kb on - strand at 161.835 kb on - strand at 161.945 kb on + strand, within Ac3H11_3609 at 161.945 kb on + strand, within Ac3H11_3609 at 161.945 kb on + strand, within Ac3H11_3609 at 161.945 kb on + strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.970 kb on + strand, within Ac3H11_3609 at 161.970 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.345 kb on + strand, within Ac3H11_3609 at 162.346 kb on - strand, within Ac3H11_3609
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 160,492 + Ac3H11_3607 0.23 -1.0 160,492 + Ac3H11_3607 0.23 -2.3 160,493 - Ac3H11_3607 0.23 -0.5 160,493 - Ac3H11_3607 0.23 -0.4 160,493 - Ac3H11_3607 0.23 -0.1 160,552 + Ac3H11_3607 0.29 -2.9 160,802 - Ac3H11_3607 0.55 +0.2 160,954 + Ac3H11_3607 0.70 +0.1 160,955 - Ac3H11_3607 0.70 -0.6 160,969 + Ac3H11_3607 0.72 -2.1 160,969 + Ac3H11_3607 0.72 +0.5 160,970 - Ac3H11_3607 0.72 +0.6 160,970 - Ac3H11_3607 0.72 -1.3 161,191 + +0.9 161,557 - Ac3H11_3608 0.49 -2.4 161,669 + Ac3H11_3608 0.79 -1.5 161,669 + Ac3H11_3608 0.79 -1.4 161,669 + Ac3H11_3608 0.79 +0.9 161,669 + Ac3H11_3608 0.79 +0.7 161,669 + Ac3H11_3608 0.79 +0.5 161,670 - Ac3H11_3608 0.79 +2.2 161,670 - Ac3H11_3608 0.79 -0.2 161,670 - Ac3H11_3608 0.79 -1.7 161,670 - Ac3H11_3608 0.79 +0.2 161,670 - Ac3H11_3608 0.79 -1.0 161,670 - Ac3H11_3608 0.79 -0.8 161,693 - Ac3H11_3608 0.85 +1.1 161,718 + +5.6 161,734 - -1.1 161,746 + +0.5 161,746 + -0.6 161,746 + +2.1 161,746 + +1.5 161,746 + +0.6 161,746 + -0.2 161,746 + -1.7 161,746 + -2.6 161,746 + -0.6 161,747 - +2.2 161,747 - -2.0 161,747 - -1.4 161,747 - -2.0 161,747 - +0.0 161,747 - -3.6 161,747 - +0.5 161,747 - -0.8 161,747 - -1.3 161,747 - +0.6 161,747 - -1.2 161,747 - -1.3 161,747 - +0.4 161,763 + +2.6 161,778 + +1.5 161,779 - +0.6 161,779 - +0.9 161,835 - +0.4 161,835 - -1.1 161,835 - +1.8 161,945 + Ac3H11_3609 0.22 +0.3 161,945 + Ac3H11_3609 0.22 -2.0 161,945 + Ac3H11_3609 0.22 +1.3 161,945 + Ac3H11_3609 0.22 +1.8 161,946 - Ac3H11_3609 0.22 -1.4 161,946 - Ac3H11_3609 0.22 +1.2 161,946 - Ac3H11_3609 0.22 +0.6 161,946 - Ac3H11_3609 0.22 +0.1 161,970 + Ac3H11_3609 0.26 +2.0 161,970 + Ac3H11_3609 0.26 +0.5 162,195 + Ac3H11_3609 0.56 -2.4 162,195 + Ac3H11_3609 0.56 +0.2 162,195 + Ac3H11_3609 0.56 -0.7 162,195 + Ac3H11_3609 0.56 -1.7 162,195 + Ac3H11_3609 0.56 +0.7 162,345 + Ac3H11_3609 0.75 -2.5 162,346 - Ac3H11_3609 0.76 +0.5
Or see this region's nucleotide sequence