Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3573 and Ac3H11_3574 are separated by 9 nucleotides Ac3H11_3574 and Ac3H11_3575 are separated by 88 nucleotides Ac3H11_3575 and Ac3H11_3576 are separated by 15 nucleotides Ac3H11_3576 and Ac3H11_3577 overlap by 4 nucleotides Ac3H11_3577 and Ac3H11_3578 overlap by 4 nucleotides
Ac3H11_3573 - ABC-type tungstate transport system, periplasmic binding protein, at 127,918 to 128,757
_3573
Ac3H11_3574 - Molybdenum-binding periplasmic protein, at 128,767 to 129,591
_3574
Ac3H11_3575 - Ubiquinone biosynthesis monooxygenase UbiB, at 129,680 to 131,380
_3575
Ac3H11_3576 - integral membrane protein-like protein, at 131,396 to 131,872
_3576
Ac3H11_3577 - hypothetical protein, at 131,869 to 132,255
_3577
Ac3H11_3578 - Carboxynorspermidine dehydrogenase, at 132,252 to 133,379
_3578
Position (kb) 129
130
131
132 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 129.221 kb on - strand, within Ac3H11_3574 at 129.268 kb on + strand, within Ac3H11_3574 at 129.269 kb on - strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.347 kb on - strand, within Ac3H11_3574 at 129.391 kb on + strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.479 kb on - strand, within Ac3H11_3574 at 130.263 kb on + strand, within Ac3H11_3575 at 130.264 kb on - strand, within Ac3H11_3575 at 130.473 kb on + strand, within Ac3H11_3575 at 130.473 kb on + strand, within Ac3H11_3575 at 130.473 kb on + strand, within Ac3H11_3575 at 130.474 kb on - strand, within Ac3H11_3575 at 131.392 kb on - strand at 131.392 kb on - strand at 131.392 kb on - strand at 131.430 kb on + strand at 131.431 kb on - strand at 131.431 kb on - strand at 131.431 kb on - strand at 131.604 kb on + strand, within Ac3H11_3576 at 131.689 kb on + strand, within Ac3H11_3576 at 131.689 kb on + strand, within Ac3H11_3576 at 131.790 kb on + strand, within Ac3H11_3576 at 131.790 kb on + strand, within Ac3H11_3576 at 131.790 kb on + strand, within Ac3H11_3576 at 131.791 kb on - strand, within Ac3H11_3576 at 131.862 kb on + strand at 131.862 kb on + strand at 131.863 kb on - strand at 132.026 kb on + strand, within Ac3H11_3577 at 132.026 kb on + strand, within Ac3H11_3577 at 132.027 kb on - strand, within Ac3H11_3577
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.01 mg/ml remove 129,221 - Ac3H11_3574 0.55 +0.7 129,268 + Ac3H11_3574 0.61 +1.5 129,269 - Ac3H11_3574 0.61 +0.5 129,346 + Ac3H11_3574 0.70 -0.2 129,346 + Ac3H11_3574 0.70 -0.2 129,346 + Ac3H11_3574 0.70 -0.7 129,346 + Ac3H11_3574 0.70 +0.8 129,347 - Ac3H11_3574 0.70 -2.8 129,391 + Ac3H11_3574 0.76 +1.6 129,392 - Ac3H11_3574 0.76 -2.1 129,392 - Ac3H11_3574 0.76 -2.3 129,392 - Ac3H11_3574 0.76 +0.6 129,479 - Ac3H11_3574 0.86 +0.2 130,263 + Ac3H11_3575 0.34 -1.7 130,264 - Ac3H11_3575 0.34 -0.8 130,473 + Ac3H11_3575 0.47 -0.5 130,473 + Ac3H11_3575 0.47 -0.4 130,473 + Ac3H11_3575 0.47 +0.9 130,474 - Ac3H11_3575 0.47 -0.0 131,392 - -0.4 131,392 - +0.6 131,392 - -0.6 131,430 + +1.3 131,431 - +1.3 131,431 - +0.4 131,431 - +0.8 131,604 + Ac3H11_3576 0.44 -2.2 131,689 + Ac3H11_3576 0.61 -0.9 131,689 + Ac3H11_3576 0.61 -1.5 131,790 + Ac3H11_3576 0.83 -0.1 131,790 + Ac3H11_3576 0.83 +0.8 131,790 + Ac3H11_3576 0.83 -0.8 131,791 - Ac3H11_3576 0.83 +2.5 131,862 + -0.6 131,862 + -1.3 131,863 - +0.5 132,026 + Ac3H11_3577 0.41 +0.5 132,026 + Ac3H11_3577 0.41 -0.2 132,027 - Ac3H11_3577 0.41 -1.5
Or see this region's nucleotide sequence