Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2835

Experiment: Paraquat dichloride 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.01 mg/ml
1,141,051	+				-0.1
1,141,051	+				-0.9
1,141,052	-				-1.7
1,141,052	-				-0.1
1,141,141	-		Ac3H11_2834	0.27	-0.2
1,141,141	-		Ac3H11_2834	0.27	-0.8
1,141,141	-		Ac3H11_2834	0.27	+1.5
1,141,212	+		Ac3H11_2834	0.41	+1.2
1,141,212	+		Ac3H11_2834	0.41	-2.9
1,141,296	+		Ac3H11_2834	0.57	+1.4
1,141,296	+		Ac3H11_2834	0.57	-0.4
1,141,296	+		Ac3H11_2834	0.57	+0.7
1,141,296	+		Ac3H11_2834	0.57	-2.5
1,141,296	+		Ac3H11_2834	0.57	-0.7
1,141,296	+		Ac3H11_2834	0.57	-0.4
1,141,297	-		Ac3H11_2834	0.58	-3.6
1,141,297	-		Ac3H11_2834	0.58	+1.1
1,141,297	-		Ac3H11_2834	0.58	+0.8
1,141,297	-		Ac3H11_2834	0.58	-2.2
1,141,297	-		Ac3H11_2834	0.58	-0.7
1,141,297	-		Ac3H11_2834	0.58	-0.2
1,141,408	+		Ac3H11_2834	0.79	-2.0
1,141,408	+		Ac3H11_2834	0.79	-3.3
1,141,408	+		Ac3H11_2834	0.79	-0.1
1,141,408	+		Ac3H11_2834	0.79	+0.4
1,141,408	+		Ac3H11_2834	0.79	+0.4
1,141,408	+		Ac3H11_2834	0.79	+3.1
1,141,408	+		Ac3H11_2834	0.79	-0.9
1,141,408	+		Ac3H11_2834	0.79	-1.0
1,141,408	+		Ac3H11_2834	0.79	-3.1
1,141,408	+		Ac3H11_2834	0.79	+2.0
1,141,408	+		Ac3H11_2834	0.79	+1.2
1,141,408	+		Ac3H11_2834	0.79	-1.1
1,141,408	+		Ac3H11_2834	0.79	-0.5
1,141,408	+		Ac3H11_2834	0.79	+0.1
1,141,409	-		Ac3H11_2834	0.79	-0.7
1,141,409	-		Ac3H11_2834	0.79	+1.2
1,141,409	-		Ac3H11_2834	0.79	+0.1
1,141,409	-		Ac3H11_2834	0.79	+3.0
1,141,409	-		Ac3H11_2834	0.79	+1.5
1,141,409	-		Ac3H11_2834	0.79	+1.4
1,141,514	+				-2.1
1,141,514	+				+0.1
1,141,514	+				-0.9
1,141,514	+				+0.5
1,141,515	-				+1.5
1,141,515	-				-0.2
1,141,515	-				-0.2
1,141,515	-				+2.0
1,141,515	-				-1.5
1,141,515	-				-3.5
1,141,515	-				-1.4
1,141,765	+				-0.4
1,141,765	+				-1.4
1,141,765	+				-0.4
1,141,765	+				-1.2
1,141,765	+				+1.6
1,141,765	+				-0.9
1,141,766	-				-3.2
1,142,020	+		Ac3H11_2835	0.57	-3.5
1,142,020	+		Ac3H11_2835	0.57	+0.6
1,142,020	+		Ac3H11_2835	0.57	-0.9
1,142,021	-		Ac3H11_2835	0.57	+0.2
1,142,021	-		Ac3H11_2835	0.57	-2.4
1,142,021	-		Ac3H11_2835	0.57	-2.5
1,142,155	+				-0.3
1,142,155	+				-1.1
1,142,155	+				-2.1
1,142,155	+				+0.8
1,142,156	-				+1.3
1,142,156	-				+1.0
1,142,280	-				-0.6
1,142,284	+				+0.3
1,142,284	+				+0.5
1,142,284	+				+0.5
1,142,284	+				+1.1
1,142,285	-				-1.5
1,142,285	-				-1.2
1,142,285	-				+2.5
1,142,285	-				-1.4
1,142,285	-				+1.6
1,142,285	-				+0.7
1,142,285	-				+3.8
1,142,285	-				-0.7
1,142,285	-				-0.8
1,142,318	+				-0.3
1,142,318	+				-0.5
1,142,318	+				+1.0
1,142,318	+				+1.4
1,142,319	-				+1.9
1,142,319	-				+0.5
1,142,319	-				+1.3
1,142,834	+		Ac3H11_2836	0.20	+0.8
1,142,835	-		Ac3H11_2836	0.20	-0.1
1,142,835	-		Ac3H11_2836	0.20	+0.8
1,142,835	-		Ac3H11_2836	0.20	+0.7
1,142,835	-		Ac3H11_2836	0.20	-3.0
1,142,835	-		Ac3H11_2836	0.20	+2.2
1,142,835	-		Ac3H11_2836	0.20	+1.0
1,142,838	+		Ac3H11_2836	0.20	-1.9
1,142,838	+		Ac3H11_2836	0.20	+1.7
1,142,838	+		Ac3H11_2836	0.20	-0.1
1,142,838	+		Ac3H11_2836	0.20	+1.7
1,142,838	+		Ac3H11_2836	0.20	+0.1
1,142,838	+		Ac3H11_2836	0.20	+1.0
1,142,838	+		Ac3H11_2836	0.20	-0.3
1,142,838	+		Ac3H11_2836	0.20	-0.5
1,142,838	+		Ac3H11_2836	0.20	+0.7
1,142,838	+		Ac3H11_2836	0.20	+2.5
1,142,838	+		Ac3H11_2836	0.20	+1.3
1,142,838	+		Ac3H11_2836	0.20	+0.9
1,142,838	+		Ac3H11_2836	0.20	+1.6
1,142,838	+		Ac3H11_2836	0.20	+0.0
1,142,838	+		Ac3H11_2836	0.20	-1.5
1,142,839	-		Ac3H11_2836	0.20	+0.3
1,142,839	-		Ac3H11_2836	0.20	+0.1
1,142,839	-		Ac3H11_2836	0.20	-0.1
1,142,839	-		Ac3H11_2836	0.20	-0.1
1,142,839	-		Ac3H11_2836	0.20	-1.7
1,142,839	-		Ac3H11_2836	0.20	-0.4
1,142,839	-		Ac3H11_2836	0.20	+0.6
1,142,839	-		Ac3H11_2836	0.20	+0.5
1,142,839	-		Ac3H11_2836	0.20	-1.8
1,142,839	-		Ac3H11_2836	0.20	+0.6
1,142,839	-		Ac3H11_2836	0.20	+0.7
1,142,839	-		Ac3H11_2836	0.20	-2.5
1,142,839	-		Ac3H11_2836	0.20	+0.2
1,142,839	-		Ac3H11_2836	0.20	-1.6
1,142,839	-		Ac3H11_2836	0.20	+1.2
1,143,009	+		Ac3H11_2836	0.28	+1.6
1,143,009	+		Ac3H11_2836	0.28	+1.3
1,143,009	+		Ac3H11_2836	0.28	-0.0
1,143,009	+		Ac3H11_2836	0.28	-0.0
1,143,010	-		Ac3H11_2836	0.28	-1.5
1,143,010	-		Ac3H11_2836	0.28	+0.5
1,143,010	-		Ac3H11_2836	0.28	-0.1
1,143,010	-		Ac3H11_2836	0.28	+1.6
1,143,010	-		Ac3H11_2836	0.28	+0.8
1,143,015	+		Ac3H11_2836	0.28	-0.6
1,143,016	-		Ac3H11_2836	0.28	-1.5
1,143,016	-		Ac3H11_2836	0.28	+0.5
1,143,016	-		Ac3H11_2836	0.28	-1.5
1,143,016	-		Ac3H11_2836	0.28	+0.7
1,143,016	-		Ac3H11_2836	0.28	+0.6
1,143,016	-		Ac3H11_2836	0.28	-0.3
1,143,016	-		Ac3H11_2836	0.28	-2.2
1,143,030	+		Ac3H11_2836	0.29	+1.8
1,143,030	+		Ac3H11_2836	0.29	+1.2
1,143,117	+		Ac3H11_2836	0.32	+1.8
1,143,117	+		Ac3H11_2836	0.32	+0.5
1,143,118	-		Ac3H11_2836	0.32	+2.1
1,143,118	-		Ac3H11_2836	0.32	-1.5
1,143,118	-		Ac3H11_2836	0.32	+1.5
1,143,118	-				+1.5