Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1769
Experiment: Paraquat dichloride 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
383,053 | - | Ac3H11_1768 | 0.45 | -3.6 | |
383,137 | - | Ac3H11_1768 | 0.54 | +1.0 | |
383,444 | + | Ac3H11_1768 | 0.88 | -0.3 | |
383,444 | + | Ac3H11_1768 | 0.88 | -1.6 | |
383,444 | + | Ac3H11_1768 | 0.88 | +0.5 | |
383,450 | + | Ac3H11_1768 | 0.89 | -1.3 | |
383,450 | + | Ac3H11_1768 | 0.89 | -0.3 | |
383,451 | - | Ac3H11_1768 | 0.89 | +1.7 | |
383,451 | - | Ac3H11_1768 | 0.89 | -3.3 | |
383,596 | + | +0.3 | |||
383,597 | - | +2.1 | |||
383,656 | + | -3.6 | |||
383,656 | + | +1.4 | |||
383,657 | - | +0.5 | |||
383,657 | - | -2.5 | |||
383,744 | + | -1.7 | |||
383,744 | + | +0.0 | |||
383,745 | - | -2.2 | |||
383,792 | + | -1.0 | |||
383,792 | + | -0.5 | |||
383,792 | + | +0.7 | |||
383,792 | + | -3.3 | |||
383,793 | - | +1.2 | |||
383,793 | - | -1.7 | |||
383,793 | - | +0.6 | |||
383,793 | - | -2.4 | |||
383,798 | + | -1.3 | |||
383,798 | + | +0.1 | |||
383,799 | - | +1.9 | |||
383,799 | - | +1.6 | |||
385,235 | - | -2.9 | |||
385,329 | + | +0.7 | |||
385,329 | + | +0.2 | |||
385,329 | + | +2.6 | |||
385,330 | - | +0.5 | |||
385,756 | - | Ac3H11_1770 | 0.53 | -0.5 | |
385,821 | + | Ac3H11_1770 | 0.60 | -2.7 | |
385,821 | + | Ac3H11_1770 | 0.60 | +2.2 | |
385,822 | - | Ac3H11_1770 | 0.60 | +1.2 | |
386,016 | + | Ac3H11_1770 | 0.81 | -0.2 |
Or see this region's nucleotide sequence