Strain Fitness in Acidovorax sp. GW101-3H11

Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1343

Experiment: Paraquat dichloride 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	Paraquat dichloride 0.01 mg/ml
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30,973	+	Ac3H11_1342	0.73	+0.3
30,991	+	Ac3H11_1342	0.77	+1.3
30,991	+	Ac3H11_1342	0.77	-3.2
30,991	+	Ac3H11_1342	0.77	+1.0
30,991	+	Ac3H11_1342	0.77	-0.8
30,991	+	Ac3H11_1342	0.77	-2.2
30,991	+	Ac3H11_1342	0.77	+0.2
30,992	-	Ac3H11_1342	0.77	+0.0
30,992	-	Ac3H11_1342	0.77	+1.1
30,992	-	Ac3H11_1342	0.77	+0.3
30,992	-	Ac3H11_1342	0.77	+0.5
30,992	-	Ac3H11_1342	0.77	-1.1
30,992	-	Ac3H11_1342	0.77	+0.6
30,992	-	Ac3H11_1342	0.77	+1.5
30,992	-	Ac3H11_1342	0.77	-0.1
31,006	+	Ac3H11_1342	0.80	+2.2
31,006	+	Ac3H11_1342	0.80	+0.6
31,007	-	Ac3H11_1342	0.80	+0.1
31,007	-	Ac3H11_1342	0.80	+0.8
31,007	-	Ac3H11_1342	0.80	+2.3
31,123	-			+1.1
31,123	-			+2.3
31,254	+			+0.9
31,254	+			-0.9
31,254	+			-1.8
31,254	+			-0.0
31,254	+			-1.1
31,254	+			-2.4
31,254	+			-0.3
31,254	+			+2.6
31,255	-			-4.0
31,255	-			+1.1
31,255	-			-1.9
31,255	-			-0.9
31,255	-			-0.4
31,255	-			-1.2
31,255	-			+1.0
31,256	+			+2.7
31,256	+			+1.3
31,256	+			+0.1
31,256	+			-0.4
31,256	+			-0.6
31,256	+			+1.5
31,256	+			-1.1
31,256	+			+0.5
31,256	+			+1.4
31,256	+			+0.0
31,256	+			+0.1
31,256	+			+2.1
31,257	-			+1.9
31,257	-			-2.3
31,257	-			+0.7
31,257	-			+1.1
31,257	-			+0.0
31,257	-			+1.4
31,257	-			-1.3
31,257	-			-0.2
31,257	-			-3.5
31,257	-			-0.0
31,257	-			-0.8
31,257	-			-0.4
31,301	+			-0.5
31,302	-			-0.6
31,361	+			+0.1
31,362	-			-2.4
31,433	+			+1.7
31,434	-			+1.5
31,446	-			+0.4
31,446	-			+0.2
31,466	+			-0.4
31,466	+			+0.9
31,466	+			+1.1
31,466	+			-1.8
31,466	+			-0.3
31,466	+			+0.4
31,466	+			-0.3
31,467	-			-1.3
31,467	-			+1.3
31,467	-			+0.1
31,467	-			-1.6
31,467	-			+1.1
31,467	-			-0.1
31,467	-			-0.1
31,467	-			+2.7
31,467	-			-2.8
31,467	-			+0.8
31,467	-			+0.0
31,467	-			-2.2
31,521	+			-1.2
31,521	+			-0.9
31,521	+			-3.3
31,522	-			+1.2
31,522	-			-0.7
31,622	+			+0.6
31,622	+			-2.9
31,622	+			-1.3
31,622	+			-3.7
31,623	-			-2.9
31,623	-			-0.8
31,623	-			-2.4
31,623	-			+1.5
31,623	-			+1.7
31,623	-			-0.8
31,623	-			+0.3
31,623	-			+1.1
31,623	-			-2.8
31,623	-			-2.6
31,623	-			-3.0
31,623	-			+0.5
31,623	-			-3.3
31,641	+			+1.3
31,642	-			+0.3
31,642	-			-1.4
31,845	+			+0.7
31,845	+			-1.8
31,845	+			-2.6
31,845	+			-3.2
31,845	+			-0.8
31,845	+			-1.9
31,845	+			+1.2
31,846	-			+1.1
31,846	-			+0.3
31,846	-			+0.9
31,846	-			+0.3
31,846	-			+3.3
31,846	-			+2.2
31,846	-			-3.2
31,886	+			+0.2
31,886	+			+0.1
31,886	+			+0.7
31,886	+			+1.8
31,886	+			+0.7
31,886	+			+0.7
31,887	-			-0.0
31,887	-			-2.6
31,887	-			-2.5
31,890	+			-2.6
31,890	+			-0.8
31,890	+			+3.3
31,890	+			+1.3
31,890	+			+0.3
31,890	+			+0.2
31,890	+			+1.5
31,890	+			+1.8
31,890	+			+0.5
31,890	+			-0.4
31,890	+			+1.8
31,890	+			+0.4
31,890	+			-1.2
31,890	+			-0.6
31,891	-			+2.6
31,891	-			-2.1
31,891	-			-1.0
31,891	-			-1.9
31,891	-			-0.5
31,891	-			-3.4
31,891	-			+0.6
31,891	-			+2.1
31,928	+			-0.5
31,928	+			+2.6
31,928	+			+0.6
31,928	+			-1.4
31,928	+			+0.3
31,928	+			+0.5
31,928	+			+0.4
31,928	+			-1.6
31,928	+			-0.4
31,929	-			-4.4
31,929	-			+0.7
31,929	-			+0.2
31,929	-			-0.6
31,929	-			-1.6
31,929	-			-0.3
31,947	-			+0.3
32,012	+	Ac3H11_1343	0.15	-1.2
32,012	+	Ac3H11_1343	0.15	-1.3
32,012	+	Ac3H11_1343	0.15	-2.2
32,012	+	Ac3H11_1343	0.15	-1.5
32,012	+	Ac3H11_1343	0.15	-2.3
32,012	+	Ac3H11_1343	0.15	+1.3
32,012	+	Ac3H11_1343	0.15	+1.3
32,012	+	Ac3H11_1343	0.15	-1.9
32,013	-	Ac3H11_1343	0.16	-0.2
32,013	-	Ac3H11_1343	0.16	+0.7
32,013	-	Ac3H11_1343	0.16	-0.1
32,013	-	Ac3H11_1343	0.16	-0.9
32,075	+	Ac3H11_1343	0.26	-1.1
32,075	+	Ac3H11_1343	0.26	-0.8
32,076	-	Ac3H11_1343	0.26	-0.1
32,076	-	Ac3H11_1343	0.26	-2.3
32,076	-	Ac3H11_1343	0.26	-3.8
32,077	+	Ac3H11_1343	0.26	+1.4
32,077	+	Ac3H11_1343	0.26	+0.5
32,077	+	Ac3H11_1343	0.26	+1.8
32,077	+	Ac3H11_1343	0.26	-1.0
32,078	-	Ac3H11_1343	0.26	+0.7
32,078	-	Ac3H11_1343	0.26	+0.9
32,105	+	Ac3H11_1343	0.31	-3.7
32,105	+	Ac3H11_1343	0.31	+1.5
32,105	+	Ac3H11_1343	0.31	-2.6
32,105	+	Ac3H11_1343	0.31	-0.8
32,105	+	Ac3H11_1343	0.31	-0.5
32,105	+	Ac3H11_1343	0.31	+0.5
32,105	+	Ac3H11_1343	0.31	+1.3
32,105	+	Ac3H11_1343	0.31	-0.1
32,105	+	Ac3H11_1343	0.31	-0.3
32,105	+	Ac3H11_1343	0.31	-3.7
32,105	+	Ac3H11_1343	0.31	+0.1
32,105	+	Ac3H11_1343	0.31	-0.6
32,105	+	Ac3H11_1343	0.31	-0.0
32,105	+	Ac3H11_1343	0.31	-0.3
32,105	+	Ac3H11_1343	0.31	+0.7
32,106	-	Ac3H11_1343	0.31	-4.9
32,106	-	Ac3H11_1343	0.31	-0.7
32,106	-	Ac3H11_1343	0.31	+1.4
32,106	-	Ac3H11_1343	0.31	-1.3
32,106	-	Ac3H11_1343	0.31	+0.3
32,106	-	Ac3H11_1343	0.31	+0.6
32,106	-	Ac3H11_1343	0.31	-3.1
32,106	-	Ac3H11_1343	0.31	+2.2
32,106	-	Ac3H11_1343	0.31	+1.1
32,106	-	Ac3H11_1343	0.31	+0.8
32,106	-	Ac3H11_1343	0.31	+1.0
32,106	-	Ac3H11_1343	0.31	+0.1
32,106	-	Ac3H11_1343	0.31	+1.1
32,106	-	Ac3H11_1343	0.31	+0.3
32,106	-	Ac3H11_1343	0.31	+1.1
32,106	-	Ac3H11_1343	0.31	-0.3
32,106	-	Ac3H11_1343	0.31	+0.7
32,106	-	Ac3H11_1343	0.31	-0.1
32,106	-	Ac3H11_1343	0.31	-0.3
32,106	-	Ac3H11_1343	0.31	-3.1
32,106	-	Ac3H11_1343	0.31	+0.0
32,132	+	Ac3H11_1343	0.35	-2.6
32,132	+	Ac3H11_1343	0.35	-1.3
32,133	-	Ac3H11_1343	0.35	-0.5
32,133	-	Ac3H11_1343	0.35	+1.7
32,133	-	Ac3H11_1343	0.35	+0.5
32,228	+	Ac3H11_1343	0.51	+0.9
32,229	-	Ac3H11_1343	0.51	-1.1
32,280	+	Ac3H11_1343	0.59	-1.1
32,280	+	Ac3H11_1343	0.59	+1.6
32,280	+	Ac3H11_1343	0.59	-2.2
32,324	+	Ac3H11_1343	0.67	-1.1
32,490	+			+1.1
32,508	+			-1.7
32,508	+			-0.9
32,574	+			+1.5

Or see this region's nucleotide sequence