Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06145 and AZOBR_RS06150 are separated by 120 nucleotides AZOBR_RS06150 and AZOBR_RS06155 are separated by 202 nucleotides AZOBR_RS06155 and AZOBR_RS06160 are separated by 43 nucleotides AZOBR_RS06160 and AZOBR_RS06165 are separated by 13 nucleotides
AZOBR_RS06145: AZOBR_RS06145 - N5-carboxyaminoimidazole ribonucleotide mutase, at 1,303,788 to 1,304,297
_RS06145
AZOBR_RS06150: AZOBR_RS06150 - small protein containing a coiled-coil domain containing protein, at 1,304,418 to 1,304,618
_RS06150
AZOBR_RS06155: AZOBR_RS06155 - 6-phosphofructokinase, at 1,304,821 to 1,305,906
_RS06155
AZOBR_RS06160: AZOBR_RS06160 - hypothetical protein, at 1,305,950 to 1,306,408
_RS06160
AZOBR_RS06165: AZOBR_RS06165 - GCN5 family N-acetyltransferase, at 1,306,422 to 1,307,009
_RS06165
Position (kb)
1304
1305
1306 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1304.327 kb on - strand at 1304.327 kb on - strand at 1304.441 kb on + strand, within AZOBR_RS06150 at 1304.441 kb on + strand, within AZOBR_RS06150 at 1304.442 kb on - strand, within AZOBR_RS06150 at 1304.442 kb on - strand, within AZOBR_RS06150 at 1304.618 kb on + strand at 1304.618 kb on + strand at 1304.652 kb on + strand at 1304.652 kb on + strand at 1304.706 kb on + strand at 1304.706 kb on + strand at 1304.709 kb on - strand at 1304.709 kb on - strand at 1304.727 kb on + strand at 1304.728 kb on - strand at 1304.730 kb on + strand at 1304.774 kb on + strand at 1304.780 kb on + strand at 1304.780 kb on + strand at 1304.781 kb on - strand at 1304.920 kb on + strand at 1304.920 kb on + strand at 1304.921 kb on - strand at 1304.983 kb on + strand, within AZOBR_RS06155 at 1304.983 kb on + strand, within AZOBR_RS06155 at 1305.595 kb on + strand, within AZOBR_RS06155 at 1305.613 kb on + strand, within AZOBR_RS06155 at 1305.614 kb on - strand, within AZOBR_RS06155 at 1305.835 kb on + strand at 1305.835 kb on + strand at 1305.835 kb on + strand at 1305.836 kb on - strand at 1305.836 kb on - strand at 1305.990 kb on - strand at 1306.214 kb on + strand, within AZOBR_RS06160 at 1306.214 kb on + strand, within AZOBR_RS06160 at 1306.214 kb on + strand, within AZOBR_RS06160 at 1306.706 kb on - strand, within AZOBR_RS06165 at 1306.706 kb on - strand, within AZOBR_RS06165
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 1,304,327 - +0.2 1,304,327 - -0.8 1,304,441 + AZOBR_RS06150 0.11 -0.3 1,304,441 + AZOBR_RS06150 0.11 +0.2 1,304,442 - AZOBR_RS06150 0.12 +0.9 1,304,442 - AZOBR_RS06150 0.12 +2.0 1,304,618 + -0.4 1,304,618 + +0.7 1,304,652 + -0.4 1,304,652 + -3.3 1,304,706 + -1.2 1,304,706 + +2.1 1,304,709 - +0.5 1,304,709 - +0.2 1,304,727 + +0.2 1,304,728 - -2.7 1,304,730 + -1.6 1,304,774 + +1.5 1,304,780 + -0.3 1,304,780 + +0.6 1,304,781 - +2.3 1,304,920 + -1.4 1,304,920 + -0.8 1,304,921 - +0.0 1,304,983 + AZOBR_RS06155 0.15 +3.3 1,304,983 + AZOBR_RS06155 0.15 -0.2 1,305,595 + AZOBR_RS06155 0.71 -0.5 1,305,613 + AZOBR_RS06155 0.73 -0.8 1,305,614 - AZOBR_RS06155 0.73 -1.9 1,305,835 + -0.5 1,305,835 + +0.3 1,305,835 + -1.2 1,305,836 - -2.3 1,305,836 - +0.1 1,305,990 - +0.0 1,306,214 + AZOBR_RS06160 0.58 +0.7 1,306,214 + AZOBR_RS06160 0.58 +0.4 1,306,214 + AZOBR_RS06160 0.58 -0.1 1,306,706 - AZOBR_RS06165 0.48 -1.8 1,306,706 - AZOBR_RS06165 0.48 +0.2
Or see this region's nucleotide sequence