Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2001

Experiment: plate grown in LD 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plate grown in LD 12:12
2,069,405	-	mrcB	Synpcc7942_2000	0.65	-3.5
2,069,462	+	mrcB	Synpcc7942_2000	0.68	-0.7
2,069,492	-	mrcB	Synpcc7942_2000	0.69	-2.7
2,069,505	+	mrcB	Synpcc7942_2000	0.70	-0.1
2,069,515	+	mrcB	Synpcc7942_2000	0.70	-3.5
2,069,615	-	mrcB	Synpcc7942_2000	0.75	-4.2
2,069,676	+	mrcB	Synpcc7942_2000	0.77	-3.1
2,069,708	+				-4.1
2,069,718	+	mrcB	Synpcc7942_2000	0.79	-3.2
2,069,765	+	mrcB	Synpcc7942_2000	0.81	-2.2
2,069,778	-	mrcB	Synpcc7942_2000	0.82	-4.7
2,069,788	+	mrcB	Synpcc7942_2000	0.82	-2.4
2,069,796	+	mrcB	Synpcc7942_2000	0.83	-1.2
2,069,898	-	mrcB	Synpcc7942_2000	0.87	-3.6
2,069,937	+	mrcB	Synpcc7942_2000	0.89	-3.6
2,069,994	-				-1.1
2,070,026	-				-4.1
2,070,028	-				-4.8
2,070,028	-				-3.5
2,070,074	+				-0.4
2,070,084	+				-1.3
2,070,141	-				-1.5
2,070,142	+				+0.8
2,070,230	+				-2.0
2,070,240	+				+0.7
2,070,240	+				+0.7
2,070,240	+				-0.3
2,070,245	+				+0.3
2,070,245	+				+3.9
2,070,251	+				-2.7
2,070,253	-				-0.7
2,070,270	-				-2.4
2,070,279	+				+1.6
2,070,288	-				-0.9
2,070,292	+				-1.9
2,070,304	-				+0.4
2,070,383	-				+1.1
2,070,390	+				+1.3
2,070,417	+				+0.1
2,070,530	+	minC	Synpcc7942_2001	0.22	+0.4
2,070,538	-	minC	Synpcc7942_2001	0.23	+0.8
2,070,550	+	minC	Synpcc7942_2001	0.25	+1.8
2,070,552	-	minC	Synpcc7942_2001	0.25	+0.5
2,070,562	-	minC	Synpcc7942_2001	0.26	+1.5
2,070,583	-	minC	Synpcc7942_2001	0.29	+0.2
2,070,611	+	minC	Synpcc7942_2001	0.32	+0.3
2,070,666	-	minC	Synpcc7942_2001	0.39	+1.0
2,070,672	-	minC	Synpcc7942_2001	0.40	-0.4
2,070,672	-	minC	Synpcc7942_2001	0.40	-1.7
2,070,679	+	minC	Synpcc7942_2001	0.40	-0.4
2,070,687	-	minC	Synpcc7942_2001	0.41	-1.5
2,070,716	-	minC	Synpcc7942_2001	0.45	-0.1
2,070,734	+	minC	Synpcc7942_2001	0.47	-0.4
2,070,754	-	minC	Synpcc7942_2001	0.50	+0.1
2,070,785	+	minC	Synpcc7942_2001	0.53	-3.6
2,070,793	-	minC	Synpcc7942_2001	0.54	+0.5
2,070,795	-	minC	Synpcc7942_2001	0.55	+0.9
2,070,795	-	minC	Synpcc7942_2001	0.55	-0.4
2,070,795	-	minC	Synpcc7942_2001	0.55	+0.1
2,070,830	+	minC	Synpcc7942_2001	0.59	-0.5
2,070,833	-	minC	Synpcc7942_2001	0.59	+1.7
2,070,901	+	minC	Synpcc7942_2001	0.68	+0.1
2,070,901	+	minC	Synpcc7942_2001	0.68	-1.4
2,070,961	+	minC	Synpcc7942_2001	0.75	+2.4
2,071,054	-	minC	Synpcc7942_2001	0.86	-1.2
2,071,088	-				+2.3
2,071,135	+				-0.8
2,071,142	+				+0.9
2,071,142	+				-0.5
2,071,142	+				-1.9
2,071,150	-				+1.0
2,071,152	-				+0.1
2,071,172	-				+0.3
2,071,179	+				-0.8
2,071,187	-				+2.3
2,071,192	-				+2.6
2,071,236	+				-2.4
2,071,239	-				+2.2
2,071,262	-				+1.3
2,071,263	+				+0.3
2,071,280	-				-0.4
2,071,316	+				+0.8
2,071,316	+				-2.2
2,071,317	-				+0.1
2,071,321	+				+0.3
2,071,321	+				-1.1
2,071,321	+				+2.8
2,071,321	+				+1.3
2,071,321	+				-2.8
2,071,324	-				+0.9
2,071,324	-				+1.8
2,071,324	-				-0.2
2,071,324	-				+0.0
2,071,324	-				+0.7
2,071,324	-				+0.9
2,071,348	+				+1.2
2,071,355	-				+1.0
2,071,371	+				+0.0
2,071,373	+				-0.9
2,071,373	+				-1.1
2,071,373	+				-0.9
2,071,381	-				+0.7
2,071,400	+				-1.0
2,071,407	-		Synpcc7942_2002	0.10	-0.9
2,071,416	+				-1.7
2,071,440	+		Synpcc7942_2002	0.15	-1.1
2,071,450	+		Synpcc7942_2002	0.16	-2.4
2,071,450	+		Synpcc7942_2002	0.16	-0.1
2,071,455	+		Synpcc7942_2002	0.17	+2.0
2,071,458	+		Synpcc7942_2002	0.17	+0.6
2,071,477	+		Synpcc7942_2002	0.20	+0.9
2,071,483	+		Synpcc7942_2002	0.21	+0.3
2,071,503	+		Synpcc7942_2002	0.24	-1.4
2,071,538	+		Synpcc7942_2002	0.29	-0.1
2,071,578	-		Synpcc7942_2002	0.34	+0.7
2,071,579	-				-0.1
2,071,581	+		Synpcc7942_2002	0.35	-0.2
2,071,584	-		Synpcc7942_2002	0.35	+0.2
2,071,584	-		Synpcc7942_2002	0.35	+0.0
2,071,584	-		Synpcc7942_2002	0.35	+1.0
2,071,604	-		Synpcc7942_2002	0.38	+1.1
2,071,604	-		Synpcc7942_2002	0.38	-0.8
2,071,618	+		Synpcc7942_2002	0.40	+0.5
2,071,623	-		Synpcc7942_2002	0.41	-2.7
2,071,636	+		Synpcc7942_2002	0.42	-0.4
2,071,637	-		Synpcc7942_2002	0.42	+1.2
2,071,648	-		Synpcc7942_2002	0.44	-0.2
2,071,663	-		Synpcc7942_2002	0.46	-0.7
2,071,681	+		Synpcc7942_2002	0.49	-0.3
2,071,682	+		Synpcc7942_2002	0.49	+0.7
2,071,719	+		Synpcc7942_2002	0.54	+0.2
2,071,736	+		Synpcc7942_2002	0.56	+1.4
2,071,785	+		Synpcc7942_2002	0.63	+1.0
2,071,795	+		Synpcc7942_2002	0.65	-0.3
2,071,805	+		Synpcc7942_2002	0.66	+0.6
2,071,805	+		Synpcc7942_2002	0.66	+0.6
2,071,805	+		Synpcc7942_2002	0.66	+0.5
2,071,805	+		Synpcc7942_2002	0.66	-1.3
2,071,805	+		Synpcc7942_2002	0.66	-1.9
2,071,805	+		Synpcc7942_2002	0.66	+0.1
2,071,806	+		Synpcc7942_2002	0.66	-2.5
2,071,808	-		Synpcc7942_2002	0.67	-3.3
2,071,813	-		Synpcc7942_2002	0.67	-2.4
2,071,813	-		Synpcc7942_2002	0.67	+1.3
2,071,815	+		Synpcc7942_2002	0.68	-1.9
2,071,828	+		Synpcc7942_2002	0.69	-0.7
2,071,828	-		Synpcc7942_2002	0.69	-1.2
2,071,893	+		Synpcc7942_2002	0.78	-0.1
2,071,896	+		Synpcc7942_2002	0.79	+0.2
2,071,914	-		Synpcc7942_2002	0.81	+0.6
2,071,927	+		Synpcc7942_2002	0.83	-0.7
2,071,952	+		Synpcc7942_2002	0.87	+0.0
2,071,999	-				-1.0
2,071,999	-				-3.5
2,071,999	-				+1.3
2,072,016	+				+0.1
2,072,024	-				-2.2
2,072,089	+				+1.5
2,072,091	+				+1.3
2,072,095	-				-0.2
2,072,097	-				+1.0
2,072,097	-				+0.3
2,072,099	-				-2.4
2,072,108	+				-1.3
2,072,109	-				-0.2
2,072,109	-				-0.2
2,072,109	-				+0.2
2,072,109	-				+0.3
2,072,109	-				-0.8
2,072,109	-				-0.3
2,072,109	-				+1.0
2,072,109	-				-2.1
2,072,109	-				-2.0
2,072,118	-				-0.6
2,072,118	-				+1.1
2,072,123	+				+0.5
2,072,141	-				+0.8
2,072,157	+				+1.8
2,072,157	+				-0.6
2,072,157	+				+0.1
2,072,157	+				-2.9
2,072,157	+				+0.4
2,072,157	+				+0.9
2,072,157	+				+0.0
2,072,165	-		Synpcc7942_2003	0.10	-0.2
2,072,165	-		Synpcc7942_2003	0.10	+1.3
2,072,165	-		Synpcc7942_2003	0.10	-0.1