Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1997

Experiment: plate grown in LD 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plate grown in LD 12:12
2,065,596	-				+0.3
2,065,597	-				+0.8
2,065,625	+				+0.5
2,065,625	+				-2.5
2,065,635	-				+0.5
2,065,679	-		Synpcc7942_1996	0.18	-0.0
2,065,686	-		Synpcc7942_1996	0.20	+0.3
2,065,704	-		Synpcc7942_1996	0.25	-0.1
2,065,717	+		Synpcc7942_1996	0.28	+0.7
2,065,754	+		Synpcc7942_1996	0.39	-1.6
2,065,756	+		Synpcc7942_1996	0.40	-2.8
2,065,763	-		Synpcc7942_1996	0.42	-0.4
2,065,789	+		Synpcc7942_1996	0.49	-2.0
2,065,831	-		Synpcc7942_1996	0.61	+0.8
2,065,831	-		Synpcc7942_1996	0.61	-1.4
2,065,844	-		Synpcc7942_1996	0.65	-1.1
2,065,893	+		Synpcc7942_1996	0.79	-3.9
2,065,902	-		Synpcc7942_1996	0.81	+1.9
2,065,941	-				+0.6
2,065,971	+				-0.1
2,065,981	+				-3.1
2,066,096	+				-0.2
2,066,113	+				-0.3
2,066,133	+				-1.4
2,066,133	+				+1.7
2,066,141	-				+0.1
2,066,149	+				+2.1
2,066,212	+	hliA	Synpcc7942_1997	0.27	-0.5
2,066,245	+	hliA	Synpcc7942_1997	0.42	-2.9
2,066,463	+				+0.4
2,066,532	-				+0.5
2,066,539	-				+0.4
2,066,539	-				+0.4
2,066,552	+				+0.8
2,066,552	+				+0.5
2,066,594	+				+0.7
2,066,625	+		Synpcc7942_1998	0.12	-0.2
2,066,625	+		Synpcc7942_1998	0.12	+0.9
2,066,625	+		Synpcc7942_1998	0.12	+1.6
2,066,630	+		Synpcc7942_1998	0.13	-2.7
2,066,633	-		Synpcc7942_1998	0.13	+2.8
2,066,633	-		Synpcc7942_1998	0.13	-3.0
2,066,635	+		Synpcc7942_1998	0.13	+0.5
2,066,641	-		Synpcc7942_1998	0.14	-3.8
2,066,641	-		Synpcc7942_1998	0.14	-3.7
2,066,643	-		Synpcc7942_1998	0.15	-0.2
2,066,657	+		Synpcc7942_1998	0.17	-2.4
2,066,681	+		Synpcc7942_1998	0.21	+0.6
2,066,689	+				-2.1
2,066,712	-		Synpcc7942_1998	0.27	-2.5
2,066,723	-		Synpcc7942_1998	0.28	+0.5
2,066,739	-		Synpcc7942_1998	0.31	+0.2
2,066,744	-		Synpcc7942_1998	0.32	-0.6
2,066,749	-		Synpcc7942_1998	0.33	-1.1
2,066,762	-		Synpcc7942_1998	0.35	+1.3
2,066,789	+		Synpcc7942_1998	0.40	-2.2
2,066,797	-		Synpcc7942_1998	0.41	+1.1
2,066,810	+		Synpcc7942_1998	0.43	-1.7
2,066,813	-		Synpcc7942_1998	0.44	+0.7
2,066,830	+		Synpcc7942_1998	0.47	+1.8
2,066,836	-		Synpcc7942_1998	0.48	+0.6
2,066,850	+		Synpcc7942_1998	0.50	-1.2
2,066,875	+		Synpcc7942_1998	0.54	-2.1
2,066,876	+		Synpcc7942_1998	0.54	+0.3
2,066,881	+		Synpcc7942_1998	0.55	-0.1
2,066,889	-		Synpcc7942_1998	0.57	-2.2
2,066,892	+		Synpcc7942_1998	0.57	-3.2
2,066,901	+		Synpcc7942_1998	0.59	+0.5
2,066,929	-		Synpcc7942_1998	0.63	+0.3
2,066,968	-				-0.7
2,066,968	-		Synpcc7942_1998	0.70	+0.9
2,066,968	-		Synpcc7942_1998	0.70	+0.1
2,066,968	-		Synpcc7942_1998	0.70	-0.3
2,067,002	-		Synpcc7942_1998	0.76	+0.0
2,067,008	+		Synpcc7942_1998	0.77	+0.6
2,067,025	+		Synpcc7942_1998	0.80	-2.5
2,067,039	+		Synpcc7942_1998	0.82	+1.1
2,067,044	+		Synpcc7942_1998	0.83	+0.7
2,067,052	-		Synpcc7942_1998	0.84	-3.2
2,067,052	-		Synpcc7942_1998	0.84	+0.7
2,067,076	-		Synpcc7942_1998	0.88	+1.1
2,067,107	-				-1.5
2,067,112	+				+0.8
2,067,178	+				-0.9
2,067,210	+				+0.9
2,067,216	+				-3.2
2,067,223	-				-2.4
2,067,223	-				+1.1
2,067,225	-				+0.2
2,067,236	+				+0.2
2,067,244	-				-0.5
2,067,245	-				+0.9
2,067,246	+				-1.1
2,067,246	+				+0.3
2,067,251	+				-3.1
2,067,251	+				+0.1
2,067,251	+				+0.3
2,067,254	-				+1.2
2,067,259	-				+0.3
2,067,259	-				-0.8
2,067,284	-				+0.4
2,067,293	+				+0.5
2,067,330	-				-0.2
2,067,345	+				-0.3
2,067,345	+				+0.4
2,067,346	-				+0.1
2,067,348	-				+1.6
2,067,348	-				-0.8
2,067,350	+				+0.3
2,067,353	-				+1.1