Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1860

Experiment: plate grown in LD 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plate grown in LD 12:12
1,929,555	+		Synpcc7942_1859	0.66	+1.0
1,929,563	-		Synpcc7942_1859	0.66	-2.2
1,929,599	-		Synpcc7942_1859	0.68	+1.0
1,929,636	-		Synpcc7942_1859	0.69	-1.9
1,929,636	-		Synpcc7942_1859	0.69	-0.2
1,929,700	-		Synpcc7942_1859	0.71	-0.2
1,929,732	+		Synpcc7942_1859	0.73	+1.0
1,929,740	-		Synpcc7942_1859	0.73	-0.8
1,929,740	-		Synpcc7942_1859	0.73	-2.2
1,929,745	-		Synpcc7942_1859	0.73	+1.4
1,929,802	+		Synpcc7942_1859	0.75	+0.2
1,929,812	+		Synpcc7942_1859	0.75	-0.5
1,929,823	+		Synpcc7942_1859	0.76	-0.9
1,929,831	-		Synpcc7942_1859	0.76	+1.3
1,929,859	+		Synpcc7942_1859	0.77	-1.7
1,929,927	+		Synpcc7942_1859	0.80	+0.9
1,929,993	-		Synpcc7942_1859	0.82	+1.1
1,930,016	-		Synpcc7942_1859	0.83	+0.5
1,930,068	+		Synpcc7942_1859	0.85	+0.5
1,930,097	-		Synpcc7942_1859	0.86	-0.2
1,930,166	+		Synpcc7942_1859	0.88	+0.1
1,930,193	+		Synpcc7942_1859	0.89	+0.4
1,930,201	-		Synpcc7942_1859	0.90	+1.5
1,930,257	-				-0.4
1,930,315	+				+0.2
1,930,318	-				+1.7
1,930,353	+				+0.4
1,930,418	-				+0.6
1,930,478	+				-0.0
1,931,194	+				-2.4
1,931,194	+				-2.3
1,931,196	+				+0.8
1,931,200	-				+0.5
1,931,202	-				+0.0
1,931,233	-				+1.5
1,931,241	+				-2.1
1,931,248	-				+1.3
1,931,248	-				-2.5
1,931,248	-				-0.1
1,931,248	-				+0.0
1,931,260	-				+0.5
1,931,279	+				-1.4
1,931,281	-				+2.0
1,931,287	-				+0.8
1,931,293	-				-2.5
1,931,298	+				-0.4
1,931,306	-				+0.5
1,931,320	+				-1.5
1,931,350	-				+0.3
1,931,350	-				+1.4
1,931,364	-				+0.4
1,931,364	-				+1.1
1,931,398	+				+0.5
1,931,407	-				+2.0
1,931,417	-				+1.8
1,931,464	-				-3.1
1,931,464	-				-0.3
1,931,484	+	natB	Synpcc7942_1861	0.11	-1.9
1,931,490	+	natB	Synpcc7942_1861	0.12	+0.2
1,931,491	+	natB	Synpcc7942_1861	0.12	+0.8
1,931,492	-	natB	Synpcc7942_1861	0.12	-0.9
1,931,492	-	natB	Synpcc7942_1861	0.12	+0.3
1,931,496	+	natB	Synpcc7942_1861	0.12	-3.1
1,931,497	-	natB	Synpcc7942_1861	0.12	-1.2
1,931,505	-	natB	Synpcc7942_1861	0.13	-0.2
1,931,536	-	natB	Synpcc7942_1861	0.15	-0.4
1,931,553	+	natB	Synpcc7942_1861	0.17	+0.2
1,931,553	+	natB	Synpcc7942_1861	0.17	+0.5
1,931,559	-	natB	Synpcc7942_1861	0.17	-0.3
1,931,570	-	natB	Synpcc7942_1861	0.18	+0.3
1,931,578	+	natB	Synpcc7942_1861	0.19	-1.9
1,931,591	-				-1.4
1,931,595	+	natB	Synpcc7942_1861	0.20	-0.5
1,931,602	+	natB	Synpcc7942_1861	0.21	+0.3
1,931,682	-	natB	Synpcc7942_1861	0.27	-3.2
1,931,717	-	natB	Synpcc7942_1861	0.30	-2.1
1,931,746	-	natB	Synpcc7942_1861	0.32	+0.1
1,931,748	+	natB	Synpcc7942_1861	0.32	+1.6
1,931,755	+	natB	Synpcc7942_1861	0.33	-1.3
1,931,756	-	natB	Synpcc7942_1861	0.33	-1.3
1,931,756	-	natB	Synpcc7942_1861	0.33	-1.3
1,931,761	+	natB	Synpcc7942_1861	0.33	+0.4
1,931,778	-	natB	Synpcc7942_1861	0.35	-1.5
1,931,788	+	natB	Synpcc7942_1861	0.35	-0.4
1,931,790	+	natB	Synpcc7942_1861	0.36	+0.1
1,931,790	+	natB	Synpcc7942_1861	0.36	+0.5
1,931,796	-	natB	Synpcc7942_1861	0.36	-0.2
1,931,798	-	natB	Synpcc7942_1861	0.36	+0.3
1,931,811	+	natB	Synpcc7942_1861	0.37	+0.2
1,931,825	+	natB	Synpcc7942_1861	0.38	-0.2
1,931,834	-	natB	Synpcc7942_1861	0.39	+0.6
1,931,840	-	natB	Synpcc7942_1861	0.39	-0.5
1,931,887	+	natB	Synpcc7942_1861	0.43	-3.2
1,931,899	+	natB	Synpcc7942_1861	0.44	+1.4
1,931,899	+	natB	Synpcc7942_1861	0.44	+0.6
1,931,932	-	natB	Synpcc7942_1861	0.47	-0.0
1,931,937	+	natB	Synpcc7942_1861	0.47	+0.6
1,931,945	-	natB	Synpcc7942_1861	0.48	-2.1
1,931,949	+	natB	Synpcc7942_1861	0.48	+0.2
1,931,951	+	natB	Synpcc7942_1861	0.48	+0.3
1,931,956	+	natB	Synpcc7942_1861	0.49	+0.9
1,931,959	+	natB	Synpcc7942_1861	0.49	+0.2
1,931,959	-	natB	Synpcc7942_1861	0.49	+0.1
1,931,961	+	natB	Synpcc7942_1861	0.49	+0.5
1,931,964	-	natB	Synpcc7942_1861	0.49	+2.1
1,931,967	-	natB	Synpcc7942_1861	0.50	+0.6
1,931,982	+	natB	Synpcc7942_1861	0.51	+0.5
1,931,990	-	natB	Synpcc7942_1861	0.51	+1.7
1,932,003	-				-2.2
1,932,005	+				+2.6
1,932,013	-	natB	Synpcc7942_1861	0.53	+0.2
1,932,035	+	natB	Synpcc7942_1861	0.55	+2.2
1,932,038	-	natB	Synpcc7942_1861	0.55	-3.2
1,932,066	+	natB	Synpcc7942_1861	0.57	-2.1
1,932,074	-	natB	Synpcc7942_1861	0.58	-0.2
1,932,085	+	natB	Synpcc7942_1861	0.59	-0.0
1,932,118	-	natB	Synpcc7942_1861	0.61	-0.8
1,932,118	-	natB	Synpcc7942_1861	0.61	+0.1
1,932,118	-	natB	Synpcc7942_1861	0.61	+1.4
1,932,123	-	natB	Synpcc7942_1861	0.62	+0.7
1,932,128	+	natB	Synpcc7942_1861	0.62	-0.0
1,932,132	+	natB	Synpcc7942_1861	0.63	-3.9
1,932,132	+	natB	Synpcc7942_1861	0.63	+0.9