Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1832

Experiment: plate grown in LD 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plate grown in LD 12:12
1,901,087	-				+1.3
1,901,089	-				-1.7
1,901,117	+				-1.2
1,901,125	-				-0.3
1,901,125	-				-1.7
1,901,132	-				+0.9
1,901,142	-				+0.0
1,901,684	-				-2.1
1,901,697	-				-0.1
1,901,803	-				+0.3
1,901,829	-				-1.8
1,901,858	+		Synpcc7942_1833	0.11	+1.2
1,901,866	-		Synpcc7942_1833	0.12	+0.4
1,901,866	-		Synpcc7942_1833	0.12	-1.4
1,901,866	-		Synpcc7942_1833	0.12	-2.5
1,901,866	-		Synpcc7942_1833	0.12	-0.3
1,901,905	+		Synpcc7942_1833	0.18	-1.2
1,901,917	+		Synpcc7942_1833	0.19	-1.1
1,901,924	+		Synpcc7942_1833	0.20	+1.0
1,901,932	-		Synpcc7942_1833	0.21	+0.6
1,901,995	+		Synpcc7942_1833	0.29	+0.9
1,902,033	+		Synpcc7942_1833	0.34	-0.2
1,902,041	-		Synpcc7942_1833	0.35	+0.9
1,902,106	-		Synpcc7942_1833	0.44	+0.1
1,902,154	-		Synpcc7942_1833	0.50	+1.6
1,902,154	-		Synpcc7942_1833	0.50	+0.9
1,902,161	+		Synpcc7942_1833	0.51	-0.3
1,902,225	+		Synpcc7942_1833	0.60	+0.3
1,902,237	+		Synpcc7942_1833	0.61	-0.7
1,902,245	-		Synpcc7942_1833	0.62	+0.0
1,902,255	-		Synpcc7942_1833	0.64	-1.6
1,902,255	-		Synpcc7942_1833	0.64	+1.2
1,902,334	+		Synpcc7942_1833	0.74	-0.5
1,902,336	-		Synpcc7942_1833	0.74	-0.1
1,902,342	-				-0.8
1,902,342	-		Synpcc7942_1833	0.75	+1.5
1,902,353	-		Synpcc7942_1833	0.77	+0.1
1,902,354	+		Synpcc7942_1833	0.77	+0.8
1,902,372	-		Synpcc7942_1833	0.79	+1.2
1,902,446	+		Synpcc7942_1833	0.89	-0.5
1,902,468	+				-0.9
1,902,468	-				-2.1
1,902,473	+				-1.0
1,902,473	+				+0.7
1,902,476	-				+1.9
1,902,476	-				+0.1
1,902,483	+				-0.9
1,902,506	-				-0.6
1,902,526	+				-0.6
1,902,526	+				-1.4
1,902,526	+				+0.5
1,902,531	+				+0.4
1,902,534	-				+0.2
1,902,584	+		Synpcc7942_1834	0.12	-0.1
1,902,600	-		Synpcc7942_1834	0.15	-2.1