Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1007

Experiment: plate grown in LD 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plate grown in LD 12:12
1,018,052	+				+0.2
1,018,145	+				+0.9
1,018,325	+				+0.6
1,018,510	+				-0.2
1,018,510	+				+1.0
1,018,518	-				+0.2
1,018,518	-				-0.2
1,018,608	-				+0.5
1,019,191	-	fumC	Synpcc7942_1007	0.21	-3.7
1,019,262	+	fumC	Synpcc7942_1007	0.26	-2.1
1,019,270	-	fumC	Synpcc7942_1007	0.26	-0.5
1,019,270	-	fumC	Synpcc7942_1007	0.26	-3.0
1,019,270	-	fumC	Synpcc7942_1007	0.26	-2.1
1,019,423	+	fumC	Synpcc7942_1007	0.37	-0.5
1,019,493	+	fumC	Synpcc7942_1007	0.42	-0.2
1,019,606	-	fumC	Synpcc7942_1007	0.50	-0.3
1,019,634	+	fumC	Synpcc7942_1007	0.52	-2.0
1,019,706	-	fumC	Synpcc7942_1007	0.58	-1.5
1,019,706	-	fumC	Synpcc7942_1007	0.58	-0.7
1,019,707	-	fumC	Synpcc7942_1007	0.58	-0.4
1,019,708	-	fumC	Synpcc7942_1007	0.58	-2.9
1,019,780	+	fumC	Synpcc7942_1007	0.63	-2.3
1,019,782	+	fumC	Synpcc7942_1007	0.63	-0.2
1,019,788	-	fumC	Synpcc7942_1007	0.64	+0.2
1,019,796	+	fumC	Synpcc7942_1007	0.64	-2.7
1,019,799	-	fumC	Synpcc7942_1007	0.64	+0.2
1,019,926	-	fumC	Synpcc7942_1007	0.73	-1.7
1,019,936	-	fumC	Synpcc7942_1007	0.74	-2.1
1,020,150	-	fumC	Synpcc7942_1007	0.90	-2.3
1,020,203	+				+0.6
1,020,219	+				-1.4
1,020,219	+				-1.3
1,020,252	-				+0.6
1,020,280	-				-0.8
1,020,338	-				+1.7
1,020,348	+				+1.0
1,020,365	-				-0.6
1,020,422	+	purU	Synpcc7942_1008	0.11	-1.2
1,020,472	+	purU	Synpcc7942_1008	0.16	-0.1
1,020,521	+	purU	Synpcc7942_1008	0.22	-2.8
1,020,528	+	purU	Synpcc7942_1008	0.23	+0.9
1,020,571	-	purU	Synpcc7942_1008	0.28	-1.2
1,020,917	-	purU	Synpcc7942_1008	0.68	-0.5
1,020,955	+	purU	Synpcc7942_1008	0.73	-0.2
1,020,957	+	purU	Synpcc7942_1008	0.73	+0.9
1,021,033	-	purU	Synpcc7942_1008	0.82	-0.6
1,021,033	-	purU	Synpcc7942_1008	0.82	-1.2
1,021,054	-	purU	Synpcc7942_1008	0.84	-1.0
1,021,083	+	purU	Synpcc7942_1008	0.88	-3.0
1,021,152	-				-4.7
1,021,157	+				-1.0
1,021,227	+				+0.6
1,021,268	-				-1.9