Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_906 and Ac3H11_907 are separated by 154 nucleotides Ac3H11_907 and Ac3H11_908 are separated by 136 nucleotides Ac3H11_908 and Ac3H11_909 are separated by 56 nucleotides
Ac3H11_906 - Glutathione S-transferase domain protein, at 20,734 to 21,429
_906
Ac3H11_907 - hypothetical protein, at 21,584 to 21,802
_907
Ac3H11_908 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 21,939 to 22,475
_908
Ac3H11_909 - Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25), at 22,532 to 23,656
_909
Position (kb) 21
22
23 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.069 kb on + strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.070 kb on - strand, within Ac3H11_906 at 21.684 kb on + strand, within Ac3H11_907 at 21.684 kb on + strand, within Ac3H11_907 at 21.685 kb on - strand, within Ac3H11_907 at 21.952 kb on + strand at 22.800 kb on + strand, within Ac3H11_909 at 22.800 kb on + strand, within Ac3H11_909 at 22.801 kb on - strand, within Ac3H11_909 at 22.833 kb on + strand, within Ac3H11_909 at 22.834 kb on - strand, within Ac3H11_909 at 22.956 kb on + strand, within Ac3H11_909 at 23.259 kb on + strand, within Ac3H11_909 at 23.409 kb on + strand, within Ac3H11_909 at 23.410 kb on - strand, within Ac3H11_909
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 21,069 + Ac3H11_906 0.48 -0.7 21,069 + Ac3H11_906 0.48 -2.3 21,069 + Ac3H11_906 0.48 -1.5 21,069 + Ac3H11_906 0.48 -0.3 21,069 + Ac3H11_906 0.48 -0.2 21,069 + Ac3H11_906 0.48 -0.3 21,069 + Ac3H11_906 0.48 -0.4 21,069 + Ac3H11_906 0.48 -0.2 21,069 + Ac3H11_906 0.48 +1.1 21,069 + Ac3H11_906 0.48 +0.4 21,070 - Ac3H11_906 0.48 -0.5 21,070 - Ac3H11_906 0.48 -0.2 21,070 - Ac3H11_906 0.48 +0.3 21,070 - Ac3H11_906 0.48 -0.1 21,070 - Ac3H11_906 0.48 -3.0 21,070 - Ac3H11_906 0.48 -0.4 21,070 - Ac3H11_906 0.48 +1.8 21,684 + Ac3H11_907 0.46 -1.5 21,684 + Ac3H11_907 0.46 -2.1 21,685 - Ac3H11_907 0.46 +0.5 21,952 + +2.2 22,800 + Ac3H11_909 0.24 +0.6 22,800 + Ac3H11_909 0.24 -1.3 22,801 - Ac3H11_909 0.24 +0.2 22,833 + Ac3H11_909 0.27 -0.5 22,834 - Ac3H11_909 0.27 -1.8 22,956 + Ac3H11_909 0.38 -0.8 23,259 + Ac3H11_909 0.65 -1.9 23,409 + Ac3H11_909 0.78 -1.5 23,410 - Ac3H11_909 0.78 -0.3
Or see this region's nucleotide sequence