Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_698 and Ac3H11_699 are separated by 141 nucleotides Ac3H11_699 and Ac3H11_700 are separated by 3 nucleotides
Ac3H11_698 - Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein, at 54,990 to 56,576
_698
Ac3H11_699 - RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein, at 56,718 to 57,107
_699
Ac3H11_700 - 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45), at 57,111 to 58,070
_700
Position (kb) 56
57
58 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 55.770 kb on + strand, within Ac3H11_698 at 55.783 kb on + strand, within Ac3H11_698 at 55.784 kb on - strand, within Ac3H11_698 at 55.969 kb on + strand, within Ac3H11_698 at 55.969 kb on + strand, within Ac3H11_698 at 56.075 kb on - strand, within Ac3H11_698 at 56.257 kb on + strand, within Ac3H11_698 at 56.257 kb on + strand, within Ac3H11_698 at 56.257 kb on + strand, within Ac3H11_698 at 56.258 kb on - strand, within Ac3H11_698 at 56.335 kb on + strand, within Ac3H11_698 at 56.335 kb on + strand, within Ac3H11_698 at 56.335 kb on + strand, within Ac3H11_698 at 56.336 kb on - strand, within Ac3H11_698 at 56.336 kb on - strand, within Ac3H11_698 at 56.347 kb on + strand, within Ac3H11_698 at 56.347 kb on + strand, within Ac3H11_698 at 56.348 kb on - strand, within Ac3H11_698 at 56.348 kb on - strand, within Ac3H11_698 at 56.348 kb on - strand, within Ac3H11_698 at 56.348 kb on - strand, within Ac3H11_698 at 56.348 kb on - strand, within Ac3H11_698 at 56.725 kb on + strand at 56.726 kb on - strand at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.997 kb on + strand, within Ac3H11_699 at 56.998 kb on - strand, within Ac3H11_699 at 56.998 kb on - strand, within Ac3H11_699 at 57.091 kb on - strand at 57.202 kb on - strand at 57.202 kb on - strand at 57.202 kb on - strand at 57.273 kb on + strand, within Ac3H11_700 at 57.273 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.387 kb on + strand, within Ac3H11_700 at 57.388 kb on - strand, within Ac3H11_700 at 57.388 kb on - strand, within Ac3H11_700 at 57.388 kb on - strand, within Ac3H11_700 at 57.388 kb on - strand, within Ac3H11_700 at 57.388 kb on - strand, within Ac3H11_700 at 57.388 kb on - strand, within Ac3H11_700 at 57.427 kb on - strand, within Ac3H11_700 at 57.579 kb on + strand, within Ac3H11_700 at 57.579 kb on + strand, within Ac3H11_700 at 57.580 kb on - strand, within Ac3H11_700 at 57.580 kb on - strand, within Ac3H11_700 at 57.708 kb on + strand, within Ac3H11_700 at 57.982 kb on - strand at 58.068 kb on + strand at 58.068 kb on + strand at 58.068 kb on + strand at 58.069 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 55,770 + Ac3H11_698 0.49 -1.0 55,783 + Ac3H11_698 0.50 -1.6 55,784 - Ac3H11_698 0.50 +0.2 55,969 + Ac3H11_698 0.62 +1.1 55,969 + Ac3H11_698 0.62 +0.1 56,075 - Ac3H11_698 0.68 -0.5 56,257 + Ac3H11_698 0.80 -0.2 56,257 + Ac3H11_698 0.80 -1.1 56,257 + Ac3H11_698 0.80 -1.1 56,258 - Ac3H11_698 0.80 -1.0 56,335 + Ac3H11_698 0.85 -3.9 56,335 + Ac3H11_698 0.85 +2.8 56,335 + Ac3H11_698 0.85 -0.8 56,336 - Ac3H11_698 0.85 +0.9 56,336 - Ac3H11_698 0.85 -0.5 56,347 + Ac3H11_698 0.86 +0.5 56,347 + Ac3H11_698 0.86 -1.1 56,348 - Ac3H11_698 0.86 -1.4 56,348 - Ac3H11_698 0.86 -3.1 56,348 - Ac3H11_698 0.86 -0.5 56,348 - Ac3H11_698 0.86 +0.5 56,348 - Ac3H11_698 0.86 -0.8 56,725 + -0.8 56,726 - -0.1 56,997 + Ac3H11_699 0.72 +0.9 56,997 + Ac3H11_699 0.72 -1.0 56,997 + Ac3H11_699 0.72 +0.4 56,997 + Ac3H11_699 0.72 +1.5 56,997 + Ac3H11_699 0.72 -1.5 56,997 + Ac3H11_699 0.72 +0.8 56,997 + Ac3H11_699 0.72 -1.1 56,997 + Ac3H11_699 0.72 -0.8 56,997 + Ac3H11_699 0.72 -0.1 56,997 + Ac3H11_699 0.72 -1.9 56,997 + Ac3H11_699 0.72 -0.9 56,998 - Ac3H11_699 0.72 +0.9 56,998 - Ac3H11_699 0.72 -1.8 57,091 - -1.0 57,202 - +0.1 57,202 - +0.9 57,202 - -1.3 57,273 + Ac3H11_700 0.17 +0.7 57,273 + Ac3H11_700 0.17 -0.1 57,387 + Ac3H11_700 0.29 +0.7 57,387 + Ac3H11_700 0.29 +2.7 57,387 + Ac3H11_700 0.29 +0.7 57,387 + Ac3H11_700 0.29 -0.6 57,387 + Ac3H11_700 0.29 +0.5 57,387 + Ac3H11_700 0.29 -1.2 57,387 + Ac3H11_700 0.29 -1.5 57,387 + Ac3H11_700 0.29 -0.4 57,387 + Ac3H11_700 0.29 -1.3 57,387 + Ac3H11_700 0.29 -0.4 57,388 - Ac3H11_700 0.29 -2.5 57,388 - Ac3H11_700 0.29 -0.2 57,388 - Ac3H11_700 0.29 -1.0 57,388 - Ac3H11_700 0.29 +0.9 57,388 - Ac3H11_700 0.29 -0.3 57,388 - Ac3H11_700 0.29 -0.2 57,427 - Ac3H11_700 0.33 +0.7 57,579 + Ac3H11_700 0.49 -0.2 57,579 + Ac3H11_700 0.49 -0.7 57,580 - Ac3H11_700 0.49 +1.0 57,580 - Ac3H11_700 0.49 +2.1 57,708 + Ac3H11_700 0.62 +0.3 57,982 - +0.1 58,068 + +1.7 58,068 + -0.2 58,068 + -0.3 58,069 - +1.4
Or see this region's nucleotide sequence