Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_695 and Ac3H11_696 overlap by 4 nucleotides Ac3H11_696 and Ac3H11_697 overlap by 4 nucleotides Ac3H11_697 and Ac3H11_698 are separated by 18 nucleotides
Ac3H11_695 - Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1), at 52,097 to 53,164
_695
Ac3H11_696 - Dipeptide transport system permease protein DppC (TC 3.A.1.5.2), at 53,161 to 54,024
_696
Ac3H11_697 - Dipeptide transport system permease protein DppB (TC 3.A.1.5.2), at 54,021 to 54,971
_697
Ac3H11_698 - Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein, at 54,990 to 56,576
_698
Position (kb) 54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 53.164 kb on + strand at 53.165 kb on - strand at 53.288 kb on + strand, within Ac3H11_696 at 53.384 kb on + strand, within Ac3H11_696 at 53.385 kb on - strand, within Ac3H11_696 at 53.556 kb on - strand, within Ac3H11_696 at 53.768 kb on + strand, within Ac3H11_696 at 53.769 kb on - strand, within Ac3H11_696 at 53.932 kb on + strand, within Ac3H11_696 at 53.933 kb on - strand, within Ac3H11_696 at 54.061 kb on + strand at 54.062 kb on - strand at 54.094 kb on + strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.095 kb on - strand at 54.243 kb on + strand, within Ac3H11_697 at 54.244 kb on - strand, within Ac3H11_697 at 54.337 kb on + strand, within Ac3H11_697 at 54.337 kb on + strand, within Ac3H11_697 at 54.337 kb on + strand, within Ac3H11_697 at 54.337 kb on + strand, within Ac3H11_697 at 54.337 kb on + strand, within Ac3H11_697 at 54.338 kb on - strand, within Ac3H11_697 at 54.338 kb on - strand, within Ac3H11_697 at 54.338 kb on - strand, within Ac3H11_697 at 54.338 kb on - strand, within Ac3H11_697 at 54.472 kb on + strand, within Ac3H11_697 at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.991 kb on + strand at 54.992 kb on - strand at 54.992 kb on - strand at 54.992 kb on - strand at 55.039 kb on + strand at 55.040 kb on - strand at 55.040 kb on - strand at 55.285 kb on + strand, within Ac3H11_698 at 55.285 kb on + strand, within Ac3H11_698 at 55.286 kb on - strand, within Ac3H11_698 at 55.286 kb on - strand, within Ac3H11_698 at 55.405 kb on + strand, within Ac3H11_698 at 55.405 kb on + strand, within Ac3H11_698 at 55.406 kb on - strand, within Ac3H11_698 at 55.456 kb on + strand, within Ac3H11_698 at 55.507 kb on + strand, within Ac3H11_698 at 55.507 kb on + strand, within Ac3H11_698 at 55.507 kb on + strand, within Ac3H11_698 at 55.507 kb on + strand, within Ac3H11_698 at 55.531 kb on + strand, within Ac3H11_698 at 55.531 kb on + strand, within Ac3H11_698 at 55.532 kb on - strand, within Ac3H11_698 at 55.532 kb on - strand, within Ac3H11_698 at 55.532 kb on - strand, within Ac3H11_698 at 55.534 kb on + strand, within Ac3H11_698 at 55.534 kb on + strand, within Ac3H11_698 at 55.534 kb on + strand, within Ac3H11_698 at 55.534 kb on + strand, within Ac3H11_698 at 55.535 kb on - strand, within Ac3H11_698 at 55.690 kb on + strand, within Ac3H11_698 at 55.690 kb on + strand, within Ac3H11_698 at 55.690 kb on + strand, within Ac3H11_698 at 55.691 kb on - strand, within Ac3H11_698 at 55.691 kb on - strand, within Ac3H11_698 at 55.770 kb on + strand, within Ac3H11_698 at 55.783 kb on + strand, within Ac3H11_698 at 55.784 kb on - strand, within Ac3H11_698 at 55.969 kb on + strand, within Ac3H11_698 at 55.969 kb on + strand, within Ac3H11_698
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 53,164 + -1.2 53,165 - -2.1 53,288 + Ac3H11_696 0.15 +0.1 53,384 + Ac3H11_696 0.26 +7.7 53,385 - Ac3H11_696 0.26 -3.1 53,556 - Ac3H11_696 0.46 -1.1 53,768 + Ac3H11_696 0.70 +0.4 53,769 - Ac3H11_696 0.70 +0.9 53,932 + Ac3H11_696 0.89 -0.2 53,933 - Ac3H11_696 0.89 -0.7 54,061 + -2.2 54,062 - +1.2 54,094 + -0.9 54,095 - +1.5 54,095 - +1.3 54,095 - -2.1 54,243 + Ac3H11_697 0.23 +1.2 54,244 - Ac3H11_697 0.23 -2.1 54,337 + Ac3H11_697 0.33 +1.0 54,337 + Ac3H11_697 0.33 -0.8 54,337 + Ac3H11_697 0.33 -1.1 54,337 + Ac3H11_697 0.33 -1.5 54,337 + Ac3H11_697 0.33 +0.1 54,338 - Ac3H11_697 0.33 +0.3 54,338 - Ac3H11_697 0.33 -1.1 54,338 - Ac3H11_697 0.33 -0.6 54,338 - Ac3H11_697 0.33 -0.1 54,472 + Ac3H11_697 0.47 -1.4 54,991 + -0.2 54,991 + -0.2 54,991 + +0.3 54,991 + -0.5 54,991 + +1.5 54,991 + -1.3 54,991 + +1.5 54,991 + +0.7 54,991 + +3.5 54,992 - -1.5 54,992 - +0.6 54,992 - -0.4 55,039 + +0.8 55,040 - +3.1 55,040 - +2.2 55,285 + Ac3H11_698 0.19 -0.5 55,285 + Ac3H11_698 0.19 -1.1 55,286 - Ac3H11_698 0.19 -1.8 55,286 - Ac3H11_698 0.19 -0.6 55,405 + Ac3H11_698 0.26 +0.6 55,405 + Ac3H11_698 0.26 -0.7 55,406 - Ac3H11_698 0.26 -1.0 55,456 + Ac3H11_698 0.29 +3.3 55,507 + Ac3H11_698 0.33 +0.0 55,507 + Ac3H11_698 0.33 +2.0 55,507 + Ac3H11_698 0.33 +1.0 55,507 + Ac3H11_698 0.33 -1.0 55,531 + Ac3H11_698 0.34 +1.3 55,531 + Ac3H11_698 0.34 +1.8 55,532 - Ac3H11_698 0.34 +0.2 55,532 - Ac3H11_698 0.34 +0.6 55,532 - Ac3H11_698 0.34 -1.6 55,534 + Ac3H11_698 0.34 +1.3 55,534 + Ac3H11_698 0.34 +0.6 55,534 + Ac3H11_698 0.34 -1.0 55,534 + Ac3H11_698 0.34 -1.5 55,535 - Ac3H11_698 0.34 +0.2 55,690 + Ac3H11_698 0.44 +0.9 55,690 + Ac3H11_698 0.44 +1.9 55,690 + Ac3H11_698 0.44 -0.2 55,691 - Ac3H11_698 0.44 -0.1 55,691 - Ac3H11_698 0.44 -2.6 55,770 + Ac3H11_698 0.49 -1.0 55,783 + Ac3H11_698 0.50 -1.6 55,784 - Ac3H11_698 0.50 +0.2 55,969 + Ac3H11_698 0.62 +1.1 55,969 + Ac3H11_698 0.62 +0.1
Or see this region's nucleotide sequence