Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_473 and Ac3H11_474 are separated by 106 nucleotides Ac3H11_474 and Ac3H11_475 are separated by 150 nucleotides Ac3H11_475 and Ac3H11_476 are separated by 222 nucleotides Ac3H11_476 and Ac3H11_477 are separated by 48 nucleotides
Ac3H11_473 - Recombination protein RecR, at 169,977 to 170,486
_473
Ac3H11_474 - probable membrane protein NMA1176, at 170,593 to 171,006
_474
Ac3H11_475 - Hydroxymethylpyrimidine ABC transporter, substrate-binding component, at 171,157 to 172,233
_475
Ac3H11_476 - hypothetical protein, at 172,456 to 172,608
_476
Ac3H11_477 - Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-), at 172,657 to 174,171
_477
Position (kb) 171
172
173 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.205 kb on + strand, within Ac3H11_473 at 170.206 kb on - strand, within Ac3H11_473 at 170.206 kb on - strand, within Ac3H11_473 at 170.206 kb on - strand, within Ac3H11_473 at 170.439 kb on + strand at 170.439 kb on + strand at 170.439 kb on + strand at 170.440 kb on - strand at 170.529 kb on + strand at 170.905 kb on + strand, within Ac3H11_474 at 170.905 kb on + strand, within Ac3H11_474 at 170.906 kb on - strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.917 kb on + strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 170.918 kb on - strand, within Ac3H11_474 at 171.084 kb on + strand at 171.084 kb on + strand at 171.084 kb on + strand at 171.085 kb on - strand at 171.085 kb on - strand at 171.088 kb on + strand at 171.088 kb on + strand at 171.088 kb on + strand at 171.088 kb on + strand at 171.089 kb on - strand at 171.089 kb on - strand at 171.089 kb on - strand at 171.089 kb on - strand at 171.089 kb on - strand at 171.328 kb on + strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.329 kb on - strand, within Ac3H11_475 at 171.365 kb on - strand, within Ac3H11_475 at 171.374 kb on + strand, within Ac3H11_475 at 171.375 kb on - strand, within Ac3H11_475 at 171.580 kb on + strand, within Ac3H11_475 at 171.580 kb on + strand, within Ac3H11_475 at 171.581 kb on - strand, within Ac3H11_475 at 171.581 kb on - strand, within Ac3H11_475 at 171.861 kb on - strand, within Ac3H11_475 at 171.893 kb on - strand, within Ac3H11_475 at 171.893 kb on - strand, within Ac3H11_475 at 171.945 kb on + strand, within Ac3H11_475 at 172.021 kb on + strand, within Ac3H11_475 at 172.022 kb on - strand, within Ac3H11_475 at 172.022 kb on - strand, within Ac3H11_475 at 172.022 kb on - strand, within Ac3H11_475 at 172.045 kb on + strand, within Ac3H11_475 at 172.045 kb on + strand, within Ac3H11_475 at 172.045 kb on + strand, within Ac3H11_475 at 172.046 kb on - strand, within Ac3H11_475 at 172.046 kb on - strand, within Ac3H11_475 at 172.046 kb on - strand, within Ac3H11_475 at 172.186 kb on + strand at 172.186 kb on + strand at 172.187 kb on - strand at 172.187 kb on - strand at 172.187 kb on - strand at 172.222 kb on + strand at 172.222 kb on + strand at 172.222 kb on + strand at 172.222 kb on + strand at 172.222 kb on + strand at 172.223 kb on - strand at 172.223 kb on - strand at 172.327 kb on + strand at 172.327 kb on + strand at 172.327 kb on + strand at 172.328 kb on - strand at 172.328 kb on - strand at 172.328 kb on - strand at 172.328 kb on - strand at 172.328 kb on - strand at 172.552 kb on + strand, within Ac3H11_476 at 172.552 kb on + strand, within Ac3H11_476 at 172.552 kb on + strand, within Ac3H11_476 at 172.552 kb on + strand, within Ac3H11_476 at 172.552 kb on + strand, within Ac3H11_476 at 172.553 kb on - strand, within Ac3H11_476 at 172.553 kb on - strand, within Ac3H11_476 at 172.553 kb on - strand, within Ac3H11_476 at 172.553 kb on - strand, within Ac3H11_476 at 172.574 kb on + strand, within Ac3H11_476 at 172.574 kb on + strand, within Ac3H11_476 at 172.575 kb on - strand, within Ac3H11_476 at 172.575 kb on - strand, within Ac3H11_476 at 172.772 kb on + strand at 172.772 kb on + strand at 172.772 kb on + strand at 172.773 kb on - strand at 172.773 kb on - strand at 172.857 kb on - strand, within Ac3H11_477 at 173.144 kb on + strand, within Ac3H11_477 at 173.145 kb on - strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.167 kb on + strand, within Ac3H11_477 at 173.168 kb on - strand, within Ac3H11_477 at 173.168 kb on - strand, within Ac3H11_477 at 173.168 kb on - strand, within Ac3H11_477 at 173.168 kb on - strand, within Ac3H11_477 at 173.168 kb on - strand, within Ac3H11_477 at 173.168 kb on - strand, within Ac3H11_477
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 170,205 + Ac3H11_473 0.45 -0.2 170,205 + Ac3H11_473 0.45 -2.3 170,205 + Ac3H11_473 0.45 -1.6 170,205 + Ac3H11_473 0.45 -0.5 170,205 + Ac3H11_473 0.45 -0.9 170,205 + Ac3H11_473 0.45 -1.1 170,205 + Ac3H11_473 0.45 +0.2 170,205 + Ac3H11_473 0.45 -2.1 170,205 + Ac3H11_473 0.45 -1.7 170,205 + Ac3H11_473 0.45 -1.6 170,206 - Ac3H11_473 0.45 +0.4 170,206 - Ac3H11_473 0.45 +1.7 170,206 - Ac3H11_473 0.45 +0.5 170,439 + -0.7 170,439 + +1.2 170,439 + +0.0 170,440 - +0.4 170,529 + -0.2 170,905 + Ac3H11_474 0.75 +3.1 170,905 + Ac3H11_474 0.75 +3.4 170,906 - Ac3H11_474 0.76 +0.8 170,917 + Ac3H11_474 0.78 +0.6 170,917 + Ac3H11_474 0.78 -1.1 170,917 + Ac3H11_474 0.78 -0.8 170,917 + Ac3H11_474 0.78 -0.8 170,917 + Ac3H11_474 0.78 +0.7 170,917 + Ac3H11_474 0.78 -0.1 170,917 + Ac3H11_474 0.78 -0.4 170,917 + Ac3H11_474 0.78 -2.2 170,917 + Ac3H11_474 0.78 +2.4 170,917 + Ac3H11_474 0.78 +0.7 170,917 + Ac3H11_474 0.78 -2.8 170,917 + Ac3H11_474 0.78 +0.9 170,917 + Ac3H11_474 0.78 -0.2 170,917 + Ac3H11_474 0.78 -1.2 170,917 + Ac3H11_474 0.78 +0.9 170,917 + Ac3H11_474 0.78 -1.1 170,917 + Ac3H11_474 0.78 +1.3 170,917 + Ac3H11_474 0.78 +0.6 170,917 + Ac3H11_474 0.78 +0.4 170,917 + Ac3H11_474 0.78 +0.3 170,917 + Ac3H11_474 0.78 +0.0 170,917 + Ac3H11_474 0.78 +1.5 170,917 + Ac3H11_474 0.78 +0.4 170,917 + Ac3H11_474 0.78 -2.0 170,917 + Ac3H11_474 0.78 +1.3 170,917 + Ac3H11_474 0.78 -0.2 170,917 + Ac3H11_474 0.78 +1.5 170,918 - Ac3H11_474 0.79 +1.2 170,918 - Ac3H11_474 0.79 -3.0 170,918 - Ac3H11_474 0.79 -2.2 170,918 - Ac3H11_474 0.79 -1.7 170,918 - Ac3H11_474 0.79 +1.2 170,918 - Ac3H11_474 0.79 -0.4 170,918 - Ac3H11_474 0.79 -0.2 170,918 - Ac3H11_474 0.79 -2.7 170,918 - Ac3H11_474 0.79 +2.1 170,918 - Ac3H11_474 0.79 -1.0 170,918 - Ac3H11_474 0.79 -2.3 170,918 - Ac3H11_474 0.79 +1.4 170,918 - Ac3H11_474 0.79 -0.7 170,918 - Ac3H11_474 0.79 +1.5 170,918 - Ac3H11_474 0.79 +0.6 170,918 - Ac3H11_474 0.79 +0.3 170,918 - Ac3H11_474 0.79 -0.2 170,918 - Ac3H11_474 0.79 +1.9 170,918 - Ac3H11_474 0.79 +0.2 170,918 - Ac3H11_474 0.79 +0.3 171,084 + +1.6 171,084 + -0.7 171,084 + -2.4 171,085 - +2.2 171,085 - +0.4 171,088 + -0.9 171,088 + -0.9 171,088 + +1.2 171,088 + -0.7 171,089 - -0.2 171,089 - -0.4 171,089 - +0.4 171,089 - -0.7 171,089 - +0.5 171,328 + Ac3H11_475 0.16 -0.9 171,329 - Ac3H11_475 0.16 +2.2 171,329 - Ac3H11_475 0.16 +0.6 171,329 - Ac3H11_475 0.16 +1.2 171,329 - Ac3H11_475 0.16 +0.5 171,329 - Ac3H11_475 0.16 +0.6 171,329 - Ac3H11_475 0.16 +0.6 171,329 - Ac3H11_475 0.16 +3.4 171,365 - Ac3H11_475 0.19 +1.4 171,374 + Ac3H11_475 0.20 +0.2 171,375 - Ac3H11_475 0.20 -3.1 171,580 + Ac3H11_475 0.39 -2.7 171,580 + Ac3H11_475 0.39 +0.6 171,581 - Ac3H11_475 0.39 +0.9 171,581 - Ac3H11_475 0.39 -1.7 171,861 - Ac3H11_475 0.65 -1.1 171,893 - Ac3H11_475 0.68 -0.4 171,893 - Ac3H11_475 0.68 -1.2 171,945 + Ac3H11_475 0.73 +1.6 172,021 + Ac3H11_475 0.80 +0.7 172,022 - Ac3H11_475 0.80 +1.1 172,022 - Ac3H11_475 0.80 -1.4 172,022 - Ac3H11_475 0.80 -0.5 172,045 + Ac3H11_475 0.82 +0.6 172,045 + Ac3H11_475 0.82 +1.1 172,045 + Ac3H11_475 0.82 +1.0 172,046 - Ac3H11_475 0.83 +1.5 172,046 - Ac3H11_475 0.83 +0.7 172,046 - Ac3H11_475 0.83 +0.3 172,186 + -1.4 172,186 + -1.4 172,187 - +2.8 172,187 - +1.4 172,187 - -2.0 172,222 + -2.3 172,222 + +0.6 172,222 + +0.3 172,222 + -0.4 172,222 + -0.2 172,223 - -2.0 172,223 - -0.4 172,327 + -1.2 172,327 + +0.3 172,327 + +0.1 172,328 - -2.3 172,328 - -0.5 172,328 - -2.5 172,328 - +1.3 172,328 - +1.2 172,552 + Ac3H11_476 0.63 -1.4 172,552 + Ac3H11_476 0.63 +0.3 172,552 + Ac3H11_476 0.63 +0.7 172,552 + Ac3H11_476 0.63 -1.7 172,552 + Ac3H11_476 0.63 -0.7 172,553 - Ac3H11_476 0.63 +0.6 172,553 - Ac3H11_476 0.63 -0.4 172,553 - Ac3H11_476 0.63 +0.1 172,553 - Ac3H11_476 0.63 -0.8 172,574 + Ac3H11_476 0.77 +0.9 172,574 + Ac3H11_476 0.77 +0.4 172,575 - Ac3H11_476 0.78 -0.1 172,575 - Ac3H11_476 0.78 -3.0 172,772 + -1.9 172,772 + -1.6 172,772 + -1.9 172,773 - -3.5 172,773 - -0.3 172,857 - Ac3H11_477 0.13 +0.3 173,144 + Ac3H11_477 0.32 +1.6 173,145 - Ac3H11_477 0.32 -2.2 173,167 + Ac3H11_477 0.34 -2.9 173,167 + Ac3H11_477 0.34 +0.7 173,167 + Ac3H11_477 0.34 +0.8 173,167 + Ac3H11_477 0.34 -0.1 173,167 + Ac3H11_477 0.34 -2.2 173,167 + Ac3H11_477 0.34 +0.8 173,167 + Ac3H11_477 0.34 -0.9 173,167 + Ac3H11_477 0.34 +0.8 173,168 - Ac3H11_477 0.34 +1.5 173,168 - Ac3H11_477 0.34 -2.7 173,168 - Ac3H11_477 0.34 +0.0 173,168 - Ac3H11_477 0.34 -1.1 173,168 - Ac3H11_477 0.34 -0.9 173,168 - Ac3H11_477 0.34 -0.2
Or see this region's nucleotide sequence