Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4442 and Ac3H11_4443 are separated by 290 nucleotides Ac3H11_4443 and Ac3H11_4444 are separated by 59 nucleotides Ac3H11_4444 and Ac3H11_4445 overlap by 8 nucleotides Ac3H11_4445 and Ac3H11_4446 are separated by 212 nucleotides
Ac3H11_4442 - LemA family protein, at 17,749 to 18,366
_4442
Ac3H11_4443 - Alternative dihydrofolate reductase 3, at 18,657 to 19,106
_4443
Ac3H11_4444 - Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase, at 19,166 to 20,188
_4444
Ac3H11_4445 - FIG00931152: hypothetical protein, at 20,181 to 20,732
_4445
Ac3H11_4446 - Cytochrome c5, at 20,945 to 21,493
_4446
Position (kb) 19
20
21 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 18.293 kb on + strand, within Ac3H11_4442 at 18.294 kb on - strand, within Ac3H11_4442 at 18.294 kb on - strand, within Ac3H11_4442 at 18.587 kb on + strand at 18.588 kb on - strand at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.723 kb on + strand, within Ac3H11_4443 at 18.724 kb on - strand, within Ac3H11_4443 at 18.724 kb on - strand, within Ac3H11_4443 at 18.724 kb on - strand, within Ac3H11_4443 at 18.724 kb on - strand, within Ac3H11_4443 at 18.724 kb on - strand, within Ac3H11_4443 at 19.002 kb on + strand, within Ac3H11_4443 at 19.160 kb on - strand at 19.238 kb on + strand at 19.238 kb on + strand at 19.238 kb on + strand at 19.238 kb on + strand at 19.239 kb on - strand at 19.239 kb on - strand at 19.239 kb on - strand at 19.239 kb on - strand at 19.267 kb on + strand at 19.267 kb on + strand at 19.267 kb on + strand at 19.267 kb on + strand at 19.267 kb on + strand at 19.268 kb on - strand at 19.268 kb on - strand at 19.268 kb on - strand at 19.268 kb on - strand at 19.268 kb on - strand at 19.268 kb on - strand at 19.271 kb on + strand, within Ac3H11_4444 at 19.272 kb on - strand, within Ac3H11_4444 at 19.406 kb on + strand, within Ac3H11_4444 at 19.406 kb on + strand, within Ac3H11_4444 at 19.406 kb on + strand, within Ac3H11_4444 at 19.406 kb on + strand, within Ac3H11_4444 at 19.407 kb on - strand, within Ac3H11_4444 at 19.407 kb on - strand, within Ac3H11_4444 at 19.407 kb on - strand, within Ac3H11_4444 at 19.407 kb on - strand, within Ac3H11_4444 at 19.407 kb on - strand, within Ac3H11_4444 at 19.508 kb on + strand, within Ac3H11_4444 at 19.509 kb on - strand, within Ac3H11_4444 at 19.509 kb on - strand, within Ac3H11_4444 at 19.742 kb on + strand, within Ac3H11_4444 at 19.742 kb on + strand, within Ac3H11_4444 at 19.742 kb on + strand, within Ac3H11_4444 at 19.742 kb on + strand, within Ac3H11_4444 at 19.743 kb on - strand, within Ac3H11_4444 at 19.847 kb on + strand, within Ac3H11_4444 at 19.848 kb on - strand, within Ac3H11_4444 at 19.848 kb on - strand, within Ac3H11_4444 at 19.904 kb on + strand, within Ac3H11_4444 at 19.904 kb on + strand, within Ac3H11_4444 at 19.904 kb on + strand, within Ac3H11_4444 at 19.904 kb on + strand, within Ac3H11_4444 at 19.904 kb on + strand, within Ac3H11_4444 at 19.904 kb on + strand, within Ac3H11_4444 at 19.905 kb on - strand, within Ac3H11_4444 at 19.905 kb on - strand, within Ac3H11_4444 at 19.905 kb on - strand, within Ac3H11_4444 at 20.235 kb on + strand at 20.235 kb on + strand at 20.235 kb on + strand at 20.235 kb on + strand at 20.235 kb on + strand at 20.235 kb on + strand at 20.236 kb on - strand at 20.236 kb on - strand at 20.271 kb on + strand, within Ac3H11_4445 at 20.272 kb on - strand, within Ac3H11_4445 at 20.272 kb on - strand, within Ac3H11_4445 at 20.370 kb on + strand, within Ac3H11_4445 at 20.370 kb on + strand, within Ac3H11_4445 at 20.371 kb on - strand, within Ac3H11_4445 at 20.371 kb on - strand, within Ac3H11_4445 at 20.371 kb on - strand, within Ac3H11_4445 at 20.371 kb on - strand, within Ac3H11_4445 at 20.371 kb on - strand, within Ac3H11_4445 at 20.371 kb on - strand, within Ac3H11_4445 at 20.424 kb on + strand, within Ac3H11_4445 at 20.424 kb on + strand, within Ac3H11_4445 at 20.424 kb on + strand, within Ac3H11_4445 at 20.424 kb on + strand, within Ac3H11_4445 at 20.424 kb on + strand, within Ac3H11_4445 at 20.425 kb on - strand, within Ac3H11_4445 at 20.425 kb on - strand, within Ac3H11_4445 at 20.425 kb on - strand, within Ac3H11_4445 at 20.425 kb on - strand, within Ac3H11_4445 at 20.544 kb on + strand, within Ac3H11_4445 at 20.545 kb on - strand, within Ac3H11_4445 at 20.545 kb on - strand, within Ac3H11_4445 at 20.545 kb on - strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.673 kb on + strand, within Ac3H11_4445 at 20.674 kb on - strand, within Ac3H11_4445 at 20.674 kb on - strand, within Ac3H11_4445 at 20.674 kb on - strand, within Ac3H11_4445 at 20.674 kb on - strand, within Ac3H11_4445 at 20.853 kb on + strand at 20.853 kb on + strand at 20.853 kb on + strand at 20.854 kb on - strand at 20.854 kb on - strand at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.045 kb on + strand, within Ac3H11_4446 at 21.046 kb on - strand, within Ac3H11_4446 at 21.046 kb on - strand, within Ac3H11_4446 at 21.046 kb on - strand, within Ac3H11_4446 at 21.046 kb on - strand, within Ac3H11_4446 at 21.046 kb on - strand, within Ac3H11_4446 at 21.046 kb on - strand, within Ac3H11_4446
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 18,293 + Ac3H11_4442 0.88 -0.5 18,294 - Ac3H11_4442 0.88 -0.4 18,294 - Ac3H11_4442 0.88 -0.6 18,587 + -1.5 18,588 - -1.1 18,723 + Ac3H11_4443 0.15 +0.4 18,723 + Ac3H11_4443 0.15 -0.8 18,723 + Ac3H11_4443 0.15 +0.1 18,723 + Ac3H11_4443 0.15 +0.9 18,723 + Ac3H11_4443 0.15 -2.7 18,723 + Ac3H11_4443 0.15 -0.3 18,723 + Ac3H11_4443 0.15 -0.8 18,723 + Ac3H11_4443 0.15 -0.9 18,724 - Ac3H11_4443 0.15 +0.9 18,724 - Ac3H11_4443 0.15 +1.0 18,724 - Ac3H11_4443 0.15 -0.1 18,724 - Ac3H11_4443 0.15 -0.9 18,724 - Ac3H11_4443 0.15 +0.4 19,002 + Ac3H11_4443 0.77 -0.7 19,160 - -2.9 19,238 + +1.3 19,238 + +0.0 19,238 + +0.8 19,238 + -0.5 19,239 - -0.8 19,239 - +0.2 19,239 - +2.8 19,239 - -0.8 19,267 + +0.2 19,267 + +0.1 19,267 + +0.6 19,267 + -2.4 19,267 + -0.0 19,268 - -1.6 19,268 - -1.8 19,268 - +0.6 19,268 - +0.6 19,268 - +1.6 19,268 - +0.1 19,271 + Ac3H11_4444 0.10 +2.0 19,272 - Ac3H11_4444 0.10 +1.1 19,406 + Ac3H11_4444 0.23 +0.2 19,406 + Ac3H11_4444 0.23 -2.3 19,406 + Ac3H11_4444 0.23 -0.7 19,406 + Ac3H11_4444 0.23 -0.3 19,407 - Ac3H11_4444 0.24 -0.5 19,407 - Ac3H11_4444 0.24 -2.1 19,407 - Ac3H11_4444 0.24 +1.9 19,407 - Ac3H11_4444 0.24 +1.0 19,407 - Ac3H11_4444 0.24 +1.4 19,508 + Ac3H11_4444 0.33 -0.7 19,509 - Ac3H11_4444 0.34 +0.6 19,509 - Ac3H11_4444 0.34 +2.5 19,742 + Ac3H11_4444 0.56 +2.6 19,742 + Ac3H11_4444 0.56 +0.2 19,742 + Ac3H11_4444 0.56 -0.6 19,742 + Ac3H11_4444 0.56 -2.0 19,743 - Ac3H11_4444 0.56 -0.3 19,847 + Ac3H11_4444 0.67 +0.5 19,848 - Ac3H11_4444 0.67 +0.5 19,848 - Ac3H11_4444 0.67 -0.2 19,904 + Ac3H11_4444 0.72 +0.3 19,904 + Ac3H11_4444 0.72 +0.1 19,904 + Ac3H11_4444 0.72 +0.8 19,904 + Ac3H11_4444 0.72 +0.8 19,904 + Ac3H11_4444 0.72 -0.9 19,904 + Ac3H11_4444 0.72 +0.2 19,905 - Ac3H11_4444 0.72 -0.6 19,905 - Ac3H11_4444 0.72 +0.6 19,905 - Ac3H11_4444 0.72 -2.1 20,235 + -1.8 20,235 + +0.3 20,235 + -1.2 20,235 + +1.6 20,235 + -0.3 20,235 + +1.6 20,236 - +1.4 20,236 - +0.3 20,271 + Ac3H11_4445 0.16 +1.1 20,272 - Ac3H11_4445 0.16 -2.9 20,272 - Ac3H11_4445 0.16 -0.6 20,370 + Ac3H11_4445 0.34 +1.4 20,370 + Ac3H11_4445 0.34 +1.2 20,371 - Ac3H11_4445 0.34 -0.4 20,371 - Ac3H11_4445 0.34 -2.6 20,371 - Ac3H11_4445 0.34 +0.7 20,371 - Ac3H11_4445 0.34 +0.4 20,371 - Ac3H11_4445 0.34 -0.3 20,371 - Ac3H11_4445 0.34 +1.5 20,424 + Ac3H11_4445 0.44 -1.2 20,424 + Ac3H11_4445 0.44 +1.2 20,424 + Ac3H11_4445 0.44 +0.2 20,424 + Ac3H11_4445 0.44 -0.2 20,424 + Ac3H11_4445 0.44 +1.7 20,425 - Ac3H11_4445 0.44 -0.3 20,425 - Ac3H11_4445 0.44 -2.6 20,425 - Ac3H11_4445 0.44 +1.2 20,425 - Ac3H11_4445 0.44 +1.0 20,544 + Ac3H11_4445 0.66 +0.5 20,545 - Ac3H11_4445 0.66 -1.3 20,545 - Ac3H11_4445 0.66 +2.6 20,545 - Ac3H11_4445 0.66 +1.5 20,673 + Ac3H11_4445 0.89 -0.6 20,673 + Ac3H11_4445 0.89 +0.2 20,673 + Ac3H11_4445 0.89 +1.8 20,673 + Ac3H11_4445 0.89 +0.7 20,673 + Ac3H11_4445 0.89 -0.4 20,673 + Ac3H11_4445 0.89 +0.9 20,673 + Ac3H11_4445 0.89 +0.9 20,674 - Ac3H11_4445 0.89 -2.0 20,674 - Ac3H11_4445 0.89 -1.2 20,674 - Ac3H11_4445 0.89 +1.3 20,674 - Ac3H11_4445 0.89 +0.4 20,853 + +2.0 20,853 + +0.8 20,853 + +0.3 20,854 - -1.1 20,854 - +0.6 21,045 + Ac3H11_4446 0.18 +0.3 21,045 + Ac3H11_4446 0.18 +0.3 21,045 + Ac3H11_4446 0.18 -0.3 21,045 + Ac3H11_4446 0.18 -2.7 21,045 + Ac3H11_4446 0.18 -1.5 21,045 + Ac3H11_4446 0.18 -1.2 21,045 + Ac3H11_4446 0.18 -0.3 21,045 + Ac3H11_4446 0.18 +0.6 21,045 + Ac3H11_4446 0.18 +0.1 21,046 - Ac3H11_4446 0.18 +0.9 21,046 - Ac3H11_4446 0.18 -2.8 21,046 - Ac3H11_4446 0.18 -1.3 21,046 - Ac3H11_4446 0.18 -1.6 21,046 - Ac3H11_4446 0.18 -0.5 21,046 - Ac3H11_4446 0.18 -2.5
Or see this region's nucleotide sequence