Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4429 and Ac3H11_4430 are separated by 213 nucleotides Ac3H11_4430 and Ac3H11_4431 are separated by 19 nucleotides
Ac3H11_4429 - Glutamine synthetase type I (EC 6.3.1.2), at 5,986 to 7,479
_4429
Ac3H11_4430 - FIG01198927: hypothetical protein, at 7,693 to 8,205
_4430
Ac3H11_4431 - Nitrogen regulation protein NtrB (EC 2.7.13.3), at 8,225 to 9,313
_4431
Position (kb) 7
8
9 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 7.477 kb on + strand at 7.477 kb on + strand at 7.478 kb on - strand at 7.478 kb on - strand at 7.478 kb on - strand at 7.478 kb on - strand at 7.478 kb on - strand at 7.598 kb on + strand at 7.599 kb on - strand at 7.654 kb on + strand at 7.654 kb on + strand at 7.655 kb on - strand at 7.765 kb on + strand, within Ac3H11_4430 at 7.766 kb on - strand, within Ac3H11_4430 at 7.783 kb on + strand, within Ac3H11_4430 at 7.783 kb on + strand, within Ac3H11_4430 at 7.783 kb on + strand, within Ac3H11_4430 at 7.783 kb on + strand, within Ac3H11_4430 at 7.784 kb on - strand, within Ac3H11_4430 at 7.784 kb on - strand, within Ac3H11_4430 at 7.784 kb on - strand, within Ac3H11_4430 at 7.784 kb on - strand, within Ac3H11_4430 at 7.784 kb on - strand, within Ac3H11_4430 at 7.784 kb on - strand, within Ac3H11_4430 at 8.047 kb on + strand, within Ac3H11_4430 at 8.047 kb on + strand, within Ac3H11_4430 at 8.047 kb on + strand, within Ac3H11_4430 at 8.047 kb on + strand, within Ac3H11_4430 at 8.048 kb on - strand, within Ac3H11_4430 at 8.048 kb on - strand, within Ac3H11_4430 at 8.048 kb on - strand, within Ac3H11_4430 at 8.048 kb on - strand, within Ac3H11_4430 at 8.048 kb on - strand, within Ac3H11_4430 at 8.101 kb on + strand, within Ac3H11_4430 at 8.101 kb on + strand, within Ac3H11_4430 at 8.102 kb on - strand, within Ac3H11_4430 at 8.203 kb on + strand at 8.203 kb on + strand at 8.203 kb on + strand at 8.203 kb on + strand at 8.203 kb on + strand at 8.204 kb on - strand at 8.562 kb on + strand, within Ac3H11_4431 at 8.562 kb on + strand, within Ac3H11_4431 at 8.562 kb on + strand, within Ac3H11_4431 at 8.750 kb on + strand, within Ac3H11_4431 at 8.750 kb on + strand, within Ac3H11_4431 at 8.751 kb on - strand, within Ac3H11_4431 at 8.751 kb on - strand, within Ac3H11_4431 at 8.751 kb on - strand, within Ac3H11_4431 at 8.751 kb on - strand, within Ac3H11_4431 at 8.751 kb on - strand, within Ac3H11_4431 at 8.751 kb on - strand, within Ac3H11_4431 at 8.924 kb on + strand, within Ac3H11_4431 at 8.924 kb on + strand, within Ac3H11_4431 at 8.924 kb on + strand, within Ac3H11_4431 at 8.925 kb on - strand, within Ac3H11_4431 at 9.170 kb on + strand, within Ac3H11_4431
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 7,477 + -0.8 7,477 + -1.0 7,478 - +2.3 7,478 - +1.0 7,478 - +0.5 7,478 - -1.0 7,478 - +0.3 7,598 + +0.6 7,599 - +0.3 7,654 + -0.4 7,654 + +0.5 7,655 - +0.6 7,765 + Ac3H11_4430 0.14 +2.0 7,766 - Ac3H11_4430 0.14 +0.9 7,783 + Ac3H11_4430 0.18 +1.1 7,783 + Ac3H11_4430 0.18 +1.4 7,783 + Ac3H11_4430 0.18 +1.2 7,783 + Ac3H11_4430 0.18 +0.7 7,784 - Ac3H11_4430 0.18 -1.2 7,784 - Ac3H11_4430 0.18 +1.0 7,784 - Ac3H11_4430 0.18 +2.6 7,784 - Ac3H11_4430 0.18 +1.0 7,784 - Ac3H11_4430 0.18 +0.9 7,784 - Ac3H11_4430 0.18 -0.1 8,047 + Ac3H11_4430 0.69 +1.4 8,047 + Ac3H11_4430 0.69 +1.3 8,047 + Ac3H11_4430 0.69 +1.8 8,047 + Ac3H11_4430 0.69 +1.0 8,048 - Ac3H11_4430 0.69 +2.9 8,048 - Ac3H11_4430 0.69 +1.8 8,048 - Ac3H11_4430 0.69 +1.5 8,048 - Ac3H11_4430 0.69 +0.0 8,048 - Ac3H11_4430 0.69 -1.0 8,101 + Ac3H11_4430 0.80 +1.5 8,101 + Ac3H11_4430 0.80 +1.1 8,102 - Ac3H11_4430 0.80 +1.6 8,203 + -2.8 8,203 + -0.3 8,203 + -1.4 8,203 + -0.6 8,203 + +0.6 8,204 - +1.8 8,562 + Ac3H11_4431 0.31 +1.4 8,562 + Ac3H11_4431 0.31 +0.4 8,562 + Ac3H11_4431 0.31 -0.6 8,750 + Ac3H11_4431 0.48 +0.2 8,750 + Ac3H11_4431 0.48 -0.4 8,751 - Ac3H11_4431 0.48 +1.1 8,751 - Ac3H11_4431 0.48 -2.6 8,751 - Ac3H11_4431 0.48 -0.7 8,751 - Ac3H11_4431 0.48 +1.4 8,751 - Ac3H11_4431 0.48 +0.9 8,751 - Ac3H11_4431 0.48 +1.3 8,924 + Ac3H11_4431 0.64 +3.5 8,924 + Ac3H11_4431 0.64 +0.0 8,924 + Ac3H11_4431 0.64 +1.1 8,925 - Ac3H11_4431 0.64 -2.0 9,170 + Ac3H11_4431 0.87 +1.0
Or see this region's nucleotide sequence