Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4194 and Ac3H11_4195 overlap by 38 nucleotides Ac3H11_4195 and Ac3H11_4196 are separated by 258 nucleotides
Ac3H11_4194 - DNA polymerase-like protein PA0670, at 454,413 to 455,957
_4194
Ac3H11_4195 - RecA/RadA recombinase, at 455,920 to 456,783
_4195
Ac3H11_4196 - metal dependent phosphohydrolase, at 457,042 to 457,290
_4196
Position (kb) 455
456
457 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 455.090 kb on - strand, within Ac3H11_4194 at 456.035 kb on + strand, within Ac3H11_4195 at 456.036 kb on - strand, within Ac3H11_4195 at 456.198 kb on + strand, within Ac3H11_4195 at 456.199 kb on - strand, within Ac3H11_4195 at 456.229 kb on + strand, within Ac3H11_4195 at 456.229 kb on + strand, within Ac3H11_4195 at 456.230 kb on - strand, within Ac3H11_4195 at 456.230 kb on - strand, within Ac3H11_4195 at 456.658 kb on + strand, within Ac3H11_4195 at 456.658 kb on + strand, within Ac3H11_4195 at 456.658 kb on + strand, within Ac3H11_4195 at 456.813 kb on + strand at 456.813 kb on + strand at 456.813 kb on + strand at 456.813 kb on + strand at 456.843 kb on + strand at 456.843 kb on + strand at 456.894 kb on - strand at 456.957 kb on + strand at 456.957 kb on + strand at 456.958 kb on - strand at 456.958 kb on - strand at 456.958 kb on - strand at 456.958 kb on - strand at 457.040 kb on + strand at 457.041 kb on - strand at 457.228 kb on + strand, within Ac3H11_4196 at 457.229 kb on - strand, within Ac3H11_4196 at 457.229 kb on - strand, within Ac3H11_4196 at 457.317 kb on + strand at 457.326 kb on - strand at 457.340 kb on - strand at 457.345 kb on + strand at 457.345 kb on + strand at 457.346 kb on - strand at 457.584 kb on + strand at 457.597 kb on + strand at 457.597 kb on + strand at 457.597 kb on + strand at 457.613 kb on + strand at 457.613 kb on + strand at 457.614 kb on - strand at 457.614 kb on - strand at 457.614 kb on - strand at 457.623 kb on + strand at 457.623 kb on + strand at 457.623 kb on + strand at 457.624 kb on - strand at 457.624 kb on - strand at 457.679 kb on + strand at 457.679 kb on + strand at 457.679 kb on + strand at 457.679 kb on + strand at 457.680 kb on - strand at 457.680 kb on - strand at 457.680 kb on - strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.689 kb on + strand at 457.690 kb on - strand at 457.690 kb on - strand at 457.690 kb on - strand at 457.690 kb on - strand at 457.748 kb on + strand at 457.748 kb on + strand at 457.749 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 455,090 - Ac3H11_4194 0.44 -0.8 456,035 + Ac3H11_4195 0.13 +0.6 456,036 - Ac3H11_4195 0.13 +2.5 456,198 + Ac3H11_4195 0.32 -0.1 456,199 - Ac3H11_4195 0.32 +1.2 456,229 + Ac3H11_4195 0.36 -1.7 456,229 + Ac3H11_4195 0.36 +2.0 456,230 - Ac3H11_4195 0.36 -2.9 456,230 - Ac3H11_4195 0.36 +0.4 456,658 + Ac3H11_4195 0.85 -1.6 456,658 + Ac3H11_4195 0.85 +0.0 456,658 + Ac3H11_4195 0.85 +1.6 456,813 + +1.1 456,813 + -0.0 456,813 + +0.2 456,813 + -1.0 456,843 + +1.1 456,843 + +1.2 456,894 - -2.3 456,957 + -0.1 456,957 + +1.6 456,958 - +0.6 456,958 - -0.1 456,958 - +2.6 456,958 - -2.1 457,040 + -0.5 457,041 - +0.6 457,228 + Ac3H11_4196 0.75 +0.0 457,229 - Ac3H11_4196 0.75 +1.0 457,229 - Ac3H11_4196 0.75 -0.8 457,317 + +0.5 457,326 - +0.2 457,340 - -0.3 457,345 + +1.3 457,345 + -1.5 457,346 - +1.1 457,584 + -1.9 457,597 + +0.1 457,597 + +2.7 457,597 + +1.0 457,613 + +0.8 457,613 + +0.7 457,614 - -1.2 457,614 - -1.8 457,614 - +0.9 457,623 + -2.1 457,623 + -1.2 457,623 + +0.2 457,624 - +1.1 457,624 - +3.2 457,679 + -2.1 457,679 + +0.9 457,679 + -0.1 457,679 + -0.6 457,680 - -0.6 457,680 - -0.6 457,680 - -0.1 457,689 + -1.8 457,689 + -0.0 457,689 + +1.1 457,689 + -2.6 457,689 + +1.0 457,689 + +1.6 457,690 - -0.8 457,690 - -2.0 457,690 - -1.4 457,690 - +0.3 457,748 + -1.7 457,748 + +1.7 457,749 - -0.0
Or see this region's nucleotide sequence