Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4063 and Ac3H11_4064 are separated by 850 nucleotides Ac3H11_4064 and Ac3H11_4065 are separated by 345 nucleotides
Ac3H11_4063 - 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain, at 310,515 to 311,162
_4063
Ac3H11_4064 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 312,013 to 313,524
_4064
Ac3H11_4065 - FIG00349255: hypothetical protein, at 313,870 to 314,889
_4065
Position (kb) 312
313
314 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 311.175 kb on + strand at 311.175 kb on + strand at 311.197 kb on + strand at 311.197 kb on + strand at 311.197 kb on + strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.198 kb on - strand at 311.241 kb on + strand at 311.242 kb on - strand at 311.257 kb on + strand at 311.257 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.268 kb on + strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.269 kb on - strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.270 kb on + strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.271 kb on - strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.397 kb on + strand at 311.398 kb on - strand at 311.398 kb on - strand at 311.398 kb on - strand at 311.398 kb on - strand at 311.468 kb on - strand at 311.473 kb on + strand at 311.505 kb on + strand at 311.505 kb on + strand at 311.506 kb on - strand at 311.506 kb on - strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.520 kb on + strand at 311.521 kb on - strand at 311.521 kb on - strand at 311.521 kb on - strand at 311.551 kb on + strand at 311.634 kb on - strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.690 kb on + strand at 311.691 kb on - strand at 311.691 kb on - strand at 311.691 kb on - strand at 311.691 kb on - strand at 311.765 kb on + strand at 311.766 kb on - strand at 311.766 kb on - strand at 311.774 kb on - strand at 311.853 kb on + strand at 311.896 kb on - strand at 311.896 kb on - strand at 311.911 kb on + strand at 311.911 kb on + strand at 311.912 kb on - strand at 311.982 kb on + strand at 311.983 kb on - strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.990 kb on + strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 311.991 kb on - strand at 312.008 kb on + strand at 312.008 kb on + strand at 312.009 kb on - strand at 312.009 kb on - strand at 312.014 kb on + strand at 312.014 kb on + strand at 312.014 kb on + strand at 312.015 kb on - strand at 312.015 kb on - strand at 312.053 kb on + strand at 312.053 kb on + strand at 312.179 kb on + strand, within Ac3H11_4064 at 312.179 kb on + strand, within Ac3H11_4064 at 312.180 kb on - strand, within Ac3H11_4064 at 312.281 kb on + strand, within Ac3H11_4064 at 312.282 kb on - strand, within Ac3H11_4064 at 312.282 kb on - strand, within Ac3H11_4064 at 312.375 kb on - strand, within Ac3H11_4064 at 312.375 kb on - strand, within Ac3H11_4064 at 312.375 kb on - strand, within Ac3H11_4064 at 312.635 kb on + strand, within Ac3H11_4064 at 312.636 kb on - strand, within Ac3H11_4064 at 312.636 kb on - strand, within Ac3H11_4064 at 312.643 kb on + strand, within Ac3H11_4064 at 312.643 kb on + strand, within Ac3H11_4064 at 312.643 kb on + strand, within Ac3H11_4064 at 312.643 kb on + strand, within Ac3H11_4064 at 312.644 kb on - strand, within Ac3H11_4064 at 312.644 kb on - strand, within Ac3H11_4064 at 312.692 kb on + strand, within Ac3H11_4064 at 312.692 kb on + strand, within Ac3H11_4064 at 312.693 kb on - strand, within Ac3H11_4064 at 312.693 kb on - strand, within Ac3H11_4064 at 312.829 kb on + strand, within Ac3H11_4064 at 312.829 kb on + strand, within Ac3H11_4064 at 312.830 kb on - strand, within Ac3H11_4064 at 312.830 kb on - strand, within Ac3H11_4064 at 312.830 kb on - strand, within Ac3H11_4064 at 312.830 kb on - strand, within Ac3H11_4064 at 312.900 kb on - strand, within Ac3H11_4064 at 312.900 kb on - strand, within Ac3H11_4064 at 312.900 kb on - strand, within Ac3H11_4064 at 312.900 kb on - strand, within Ac3H11_4064 at 312.905 kb on + strand, within Ac3H11_4064 at 312.905 kb on + strand, within Ac3H11_4064 at 312.905 kb on + strand, within Ac3H11_4064 at 312.905 kb on + strand, within Ac3H11_4064 at 312.905 kb on + strand, within Ac3H11_4064 at 312.906 kb on - strand, within Ac3H11_4064 at 312.906 kb on - strand, within Ac3H11_4064 at 312.938 kb on + strand, within Ac3H11_4064 at 312.938 kb on + strand, within Ac3H11_4064 at 312.938 kb on + strand, within Ac3H11_4064 at 312.939 kb on - strand, within Ac3H11_4064 at 312.983 kb on + strand, within Ac3H11_4064 at 312.983 kb on + strand, within Ac3H11_4064 at 312.983 kb on + strand, within Ac3H11_4064 at 312.983 kb on + strand, within Ac3H11_4064 at 312.984 kb on - strand, within Ac3H11_4064 at 312.984 kb on - strand, within Ac3H11_4064 at 312.984 kb on - strand, within Ac3H11_4064 at 312.984 kb on - strand, within Ac3H11_4064 at 312.984 kb on - strand, within Ac3H11_4064 at 313.001 kb on - strand, within Ac3H11_4064 at 313.058 kb on + strand, within Ac3H11_4064 at 313.058 kb on + strand, within Ac3H11_4064 at 313.058 kb on + strand, within Ac3H11_4064 at 313.058 kb on + strand, within Ac3H11_4064 at 313.059 kb on - strand, within Ac3H11_4064 at 313.059 kb on - strand, within Ac3H11_4064 at 313.059 kb on - strand, within Ac3H11_4064 at 313.131 kb on - strand, within Ac3H11_4064 at 313.131 kb on - strand, within Ac3H11_4064 at 313.131 kb on - strand, within Ac3H11_4064 at 313.245 kb on - strand, within Ac3H11_4064 at 313.245 kb on - strand, within Ac3H11_4064 at 313.271 kb on + strand, within Ac3H11_4064 at 313.271 kb on + strand, within Ac3H11_4064 at 313.271 kb on + strand, within Ac3H11_4064 at 313.272 kb on - strand, within Ac3H11_4064 at 313.272 kb on - strand, within Ac3H11_4064 at 313.329 kb on - strand, within Ac3H11_4064 at 313.329 kb on - strand, within Ac3H11_4064 at 313.349 kb on + strand, within Ac3H11_4064 at 313.349 kb on + strand, within Ac3H11_4064 at 313.350 kb on - strand, within Ac3H11_4064 at 313.350 kb on - strand, within Ac3H11_4064 at 313.350 kb on - strand, within Ac3H11_4064 at 313.350 kb on - strand, within Ac3H11_4064 at 313.436 kb on + strand at 313.436 kb on + strand at 313.618 kb on + strand at 313.618 kb on + strand at 313.618 kb on + strand at 313.618 kb on + strand at 313.618 kb on + strand at 313.618 kb on + strand at 313.619 kb on - strand at 313.619 kb on - strand at 313.619 kb on - strand at 313.619 kb on - strand at 313.619 kb on - strand at 313.619 kb on - strand at 313.653 kb on + strand at 313.653 kb on + strand at 313.653 kb on + strand at 313.653 kb on + strand at 313.653 kb on + strand at 313.653 kb on + strand at 313.653 kb on + strand at 313.654 kb on - strand at 313.654 kb on - strand at 313.654 kb on - strand at 313.762 kb on + strand at 314.020 kb on + strand, within Ac3H11_4065 at 314.020 kb on + strand, within Ac3H11_4065 at 314.020 kb on + strand, within Ac3H11_4065 at 314.021 kb on - strand, within Ac3H11_4065 at 314.102 kb on - strand, within Ac3H11_4065 at 314.102 kb on - strand, within Ac3H11_4065 at 314.102 kb on - strand, within Ac3H11_4065 at 314.311 kb on + strand, within Ac3H11_4065 at 314.312 kb on - strand, within Ac3H11_4065 at 314.312 kb on - strand, within Ac3H11_4065 at 314.312 kb on - strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.407 kb on + strand, within Ac3H11_4065 at 314.408 kb on - strand, within Ac3H11_4065 at 314.491 kb on + strand, within Ac3H11_4065 at 314.491 kb on + strand, within Ac3H11_4065 at 314.491 kb on + strand, within Ac3H11_4065 at 314.492 kb on - strand, within Ac3H11_4065 at 314.492 kb on - strand, within Ac3H11_4065 at 314.492 kb on - strand, within Ac3H11_4065 at 314.492 kb on - strand, within Ac3H11_4065 at 314.492 kb on - strand, within Ac3H11_4065
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 311,175 + +1.8 311,175 + -0.9 311,197 + +0.4 311,197 + +0.1 311,197 + +1.2 311,198 - -1.8 311,198 - -1.0 311,198 - +1.0 311,198 - -1.4 311,198 - +0.7 311,241 + +0.2 311,242 - +2.1 311,257 + +0.8 311,257 + -0.3 311,268 + +0.6 311,268 + +1.2 311,268 + +0.5 311,268 + +2.5 311,268 + +1.0 311,268 + -3.7 311,268 + -0.5 311,268 + +0.0 311,269 - -0.8 311,269 - -1.0 311,269 - -0.0 311,269 - -0.7 311,269 - -0.1 311,269 - -0.3 311,270 + +2.1 311,270 + -0.4 311,270 + -0.0 311,270 + +1.9 311,270 + +0.2 311,270 + -1.7 311,270 + -1.9 311,270 + +0.7 311,270 + -0.4 311,271 - +1.7 311,271 - -1.3 311,271 - +0.2 311,271 - -2.0 311,271 - -3.4 311,271 - +1.5 311,271 - -1.7 311,271 - +0.4 311,271 - -1.0 311,271 - -0.5 311,271 - +0.4 311,397 + +0.8 311,397 + +0.5 311,397 + +0.9 311,397 + -1.0 311,397 + -0.7 311,397 + -1.4 311,397 + +1.3 311,397 + +0.8 311,397 + -1.5 311,398 - -1.0 311,398 - +0.6 311,398 - -1.8 311,398 - -1.6 311,468 - -2.7 311,473 + -1.1 311,505 + +0.2 311,505 + +2.3 311,506 - +0.1 311,506 - +2.3 311,520 + +3.4 311,520 + -1.4 311,520 + +0.6 311,520 + +0.2 311,520 + -0.0 311,520 + +0.9 311,521 - -0.6 311,521 - -1.3 311,521 - -3.5 311,551 + -0.0 311,634 - +0.5 311,690 + -3.7 311,690 + +1.4 311,690 + -0.4 311,690 + -2.7 311,690 + -1.5 311,691 - +1.5 311,691 - +1.7 311,691 - +0.3 311,691 - -0.9 311,765 + -1.4 311,766 - +0.2 311,766 - +1.6 311,774 - -1.3 311,853 + -0.6 311,896 - +0.3 311,896 - +0.9 311,911 + +0.1 311,911 + -0.8 311,912 - +0.4 311,982 + -0.9 311,983 - -1.8 311,990 + -1.0 311,990 + -1.5 311,990 + +1.5 311,990 + -0.1 311,990 + +1.4 311,991 - +0.6 311,991 - +1.1 311,991 - -0.8 311,991 - +0.8 311,991 - -0.1 311,991 - -0.7 312,008 + -0.7 312,008 + -1.3 312,009 - +0.3 312,009 - +1.0 312,014 + +1.9 312,014 + +1.9 312,014 + +2.2 312,015 - -1.2 312,015 - -0.1 312,053 + -1.1 312,053 + +0.5 312,179 + Ac3H11_4064 0.11 -1.3 312,179 + Ac3H11_4064 0.11 +1.8 312,180 - Ac3H11_4064 0.11 -0.6 312,281 + Ac3H11_4064 0.18 +0.7 312,282 - Ac3H11_4064 0.18 +0.7 312,282 - Ac3H11_4064 0.18 -2.1 312,375 - Ac3H11_4064 0.24 -1.2 312,375 - Ac3H11_4064 0.24 +1.2 312,375 - Ac3H11_4064 0.24 +0.1 312,635 + Ac3H11_4064 0.41 +0.8 312,636 - Ac3H11_4064 0.41 -0.5 312,636 - Ac3H11_4064 0.41 -0.6 312,643 + Ac3H11_4064 0.42 -0.1 312,643 + Ac3H11_4064 0.42 +1.3 312,643 + Ac3H11_4064 0.42 -1.9 312,643 + Ac3H11_4064 0.42 -1.0 312,644 - Ac3H11_4064 0.42 +1.1 312,644 - Ac3H11_4064 0.42 -1.2 312,692 + Ac3H11_4064 0.45 -0.9 312,692 + Ac3H11_4064 0.45 -1.0 312,693 - Ac3H11_4064 0.45 +0.8 312,693 - Ac3H11_4064 0.45 +0.9 312,829 + Ac3H11_4064 0.54 -0.1 312,829 + Ac3H11_4064 0.54 -2.0 312,830 - Ac3H11_4064 0.54 -0.6 312,830 - Ac3H11_4064 0.54 +0.2 312,830 - Ac3H11_4064 0.54 -0.7 312,830 - Ac3H11_4064 0.54 +2.0 312,900 - Ac3H11_4064 0.59 -3.6 312,900 - Ac3H11_4064 0.59 +2.0 312,900 - Ac3H11_4064 0.59 +1.4 312,900 - Ac3H11_4064 0.59 -2.6 312,905 + Ac3H11_4064 0.59 +1.5 312,905 + Ac3H11_4064 0.59 -0.5 312,905 + Ac3H11_4064 0.59 -0.5 312,905 + Ac3H11_4064 0.59 -1.8 312,905 + Ac3H11_4064 0.59 -0.4 312,906 - Ac3H11_4064 0.59 -0.2 312,906 - Ac3H11_4064 0.59 -0.2 312,938 + Ac3H11_4064 0.61 -1.7 312,938 + Ac3H11_4064 0.61 -1.3 312,938 + Ac3H11_4064 0.61 -3.4 312,939 - Ac3H11_4064 0.61 +1.2 312,983 + Ac3H11_4064 0.64 -0.4 312,983 + Ac3H11_4064 0.64 -1.1 312,983 + Ac3H11_4064 0.64 +0.1 312,983 + Ac3H11_4064 0.64 -0.4 312,984 - Ac3H11_4064 0.64 -1.8 312,984 - Ac3H11_4064 0.64 -2.7 312,984 - Ac3H11_4064 0.64 -2.0 312,984 - Ac3H11_4064 0.64 +0.1 312,984 - Ac3H11_4064 0.64 -2.5 313,001 - Ac3H11_4064 0.65 +2.0 313,058 + Ac3H11_4064 0.69 -1.2 313,058 + Ac3H11_4064 0.69 -1.0 313,058 + Ac3H11_4064 0.69 -3.0 313,058 + Ac3H11_4064 0.69 -0.5 313,059 - Ac3H11_4064 0.69 -2.2 313,059 - Ac3H11_4064 0.69 +1.9 313,059 - Ac3H11_4064 0.69 -2.4 313,131 - Ac3H11_4064 0.74 -0.3 313,131 - Ac3H11_4064 0.74 +0.6 313,131 - Ac3H11_4064 0.74 -3.2 313,245 - Ac3H11_4064 0.81 +1.0 313,245 - Ac3H11_4064 0.81 +0.9 313,271 + Ac3H11_4064 0.83 +0.2 313,271 + Ac3H11_4064 0.83 +1.2 313,271 + Ac3H11_4064 0.83 +2.1 313,272 - Ac3H11_4064 0.83 -2.2 313,272 - Ac3H11_4064 0.83 +0.3 313,329 - Ac3H11_4064 0.87 +0.6 313,329 - Ac3H11_4064 0.87 +1.4 313,349 + Ac3H11_4064 0.88 +2.0 313,349 + Ac3H11_4064 0.88 +0.2 313,350 - Ac3H11_4064 0.88 -0.5 313,350 - Ac3H11_4064 0.88 +2.0 313,350 - Ac3H11_4064 0.88 +0.8 313,350 - Ac3H11_4064 0.88 +3.6 313,436 + +1.3 313,436 + +0.6 313,618 + -0.4 313,618 + +0.2 313,618 + -1.6 313,618 + -0.3 313,618 + +0.2 313,618 + -1.1 313,619 - +0.0 313,619 - -1.7 313,619 - +1.1 313,619 - -1.0 313,619 - -1.7 313,619 - -0.1 313,653 + +1.4 313,653 + +0.5 313,653 + +0.4 313,653 + -1.9 313,653 + +0.6 313,653 + +1.3 313,653 + -0.2 313,654 - +1.0 313,654 - -0.4 313,654 - -1.7 313,762 + +0.7 314,020 + Ac3H11_4065 0.15 -0.1 314,020 + Ac3H11_4065 0.15 +0.4 314,020 + Ac3H11_4065 0.15 +1.7 314,021 - Ac3H11_4065 0.15 +0.7 314,102 - Ac3H11_4065 0.23 +0.0 314,102 - Ac3H11_4065 0.23 +0.2 314,102 - Ac3H11_4065 0.23 -0.3 314,311 + Ac3H11_4065 0.43 +1.3 314,312 - Ac3H11_4065 0.43 -2.3 314,312 - Ac3H11_4065 0.43 +0.3 314,312 - Ac3H11_4065 0.43 +0.1 314,407 + Ac3H11_4065 0.53 -1.3 314,407 + Ac3H11_4065 0.53 -0.3 314,407 + Ac3H11_4065 0.53 -3.5 314,407 + Ac3H11_4065 0.53 -0.5 314,407 + Ac3H11_4065 0.53 -1.9 314,407 + Ac3H11_4065 0.53 -0.3 314,407 + Ac3H11_4065 0.53 -1.1 314,408 - Ac3H11_4065 0.53 +2.4 314,491 + Ac3H11_4065 0.61 +0.0 314,491 + Ac3H11_4065 0.61 -1.0 314,491 + Ac3H11_4065 0.61 +1.9 314,492 - Ac3H11_4065 0.61 -0.4 314,492 - Ac3H11_4065 0.61 -0.3 314,492 - Ac3H11_4065 0.61 +1.2 314,492 - Ac3H11_4065 0.61 +2.0 314,492 - Ac3H11_4065 0.61 -1.1
Or see this region's nucleotide sequence