Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2927

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
1,244,345	+		Ac3H11_2926	0.58	+2.1
1,244,345	+		Ac3H11_2926	0.58	+2.1
1,244,345	+		Ac3H11_2926	0.58	+0.7
1,244,345	+		Ac3H11_2926	0.58	+0.7
1,244,345	+		Ac3H11_2926	0.58	+1.0
1,244,345	+		Ac3H11_2926	0.58	+0.9
1,244,346	-		Ac3H11_2926	0.58	+0.7
1,244,346	-		Ac3H11_2926	0.58	+0.1
1,244,346	-		Ac3H11_2926	0.58	+0.1
1,244,346	-		Ac3H11_2926	0.58	+0.7
1,244,346	-		Ac3H11_2926	0.58	+0.7
1,244,346	-		Ac3H11_2926	0.58	+0.4
1,244,346	-		Ac3H11_2926	0.58	+0.3
1,244,346	-		Ac3H11_2926	0.58	+1.6
1,244,472	+		Ac3H11_2926	0.66	+1.5
1,244,472	+		Ac3H11_2926	0.66	-2.4
1,244,472	+		Ac3H11_2926	0.66	-1.8
1,244,472	+		Ac3H11_2926	0.66	-2.7
1,244,472	+		Ac3H11_2926	0.66	-1.2
1,244,472	+		Ac3H11_2926	0.66	+0.8
1,244,473	-		Ac3H11_2926	0.66	+0.3
1,244,473	-		Ac3H11_2926	0.66	-0.6
1,244,473	-		Ac3H11_2926	0.66	+0.4
1,244,502	-		Ac3H11_2926	0.68	-2.2
1,244,510	+		Ac3H11_2926	0.68	+0.4
1,244,551	+		Ac3H11_2926	0.71	-1.5
1,244,551	+		Ac3H11_2926	0.71	+0.4
1,244,552	-		Ac3H11_2926	0.71	-3.1
1,244,767	-		Ac3H11_2926	0.84	+0.2
1,244,767	-		Ac3H11_2926	0.84	-1.8
1,244,804	-		Ac3H11_2926	0.87	+1.1
1,244,825	+		Ac3H11_2926	0.88	+1.0
1,244,825	+		Ac3H11_2926	0.88	+0.5
1,244,825	+		Ac3H11_2926	0.88	+0.5
1,244,825	+		Ac3H11_2926	0.88	+0.8
1,244,826	-		Ac3H11_2926	0.88	+1.2
1,244,826	-		Ac3H11_2926	0.88	+4.3
1,244,826	-		Ac3H11_2926	0.88	-0.9
1,244,826	-		Ac3H11_2926	0.88	+1.1
1,244,826	-		Ac3H11_2926	0.88	+1.5
1,244,826	-		Ac3H11_2926	0.88	-2.0
1,244,831	+		Ac3H11_2926	0.89	-1.5
1,244,850	+		Ac3H11_2926	0.90	-0.5
1,244,851	-		Ac3H11_2926	0.90	-0.3
1,244,858	+				+0.3
1,244,859	-				-2.7
1,244,859	-				-0.9
1,244,885	+				-0.4
1,244,885	+				+1.7
1,244,886	-				+0.3
1,244,886	-				-0.7
1,244,918	+				-3.3
1,244,918	+				-1.1
1,244,918	+				+0.3
1,244,918	+				+0.2
1,244,918	+				+1.5
1,244,919	-				+1.4
1,244,919	-				-2.2
1,244,919	-				+1.4
1,245,082	+				+2.0
1,245,082	+				-2.8
1,245,082	+				-1.2
1,245,083	-				+0.1
1,245,083	-				+0.8
1,245,128	-		Ac3H11_2927	0.12	-1.1
1,245,129	+		Ac3H11_2927	0.12	-0.6
1,245,129	+		Ac3H11_2927	0.12	+1.8
1,245,129	+		Ac3H11_2927	0.12	+1.4
1,245,129	+		Ac3H11_2927	0.12	+1.1
1,245,129	+		Ac3H11_2927	0.12	+0.4
1,245,129	+		Ac3H11_2927	0.12	+0.4
1,245,129	+		Ac3H11_2927	0.12	+4.0
1,245,130	-		Ac3H11_2927	0.12	+0.4
1,245,130	-		Ac3H11_2927	0.12	-0.4
1,245,130	-		Ac3H11_2927	0.12	-0.0
1,245,130	-		Ac3H11_2927	0.12	+1.2
1,245,130	-		Ac3H11_2927	0.12	-0.2
1,245,130	-		Ac3H11_2927	0.12	+0.2
1,245,130	-		Ac3H11_2927	0.12	-0.2
1,245,189	+		Ac3H11_2927	0.25	-1.9
1,245,189	+		Ac3H11_2927	0.25	-1.8
1,245,190	-		Ac3H11_2927	0.25	-0.5
1,245,190	-		Ac3H11_2927	0.25	+0.7
1,245,208	+		Ac3H11_2927	0.29	+0.0
1,245,208	+		Ac3H11_2927	0.29	+1.8
1,245,209	-		Ac3H11_2927	0.29	+1.3
1,245,237	+		Ac3H11_2927	0.35	+0.0
1,245,238	-		Ac3H11_2927	0.35	+0.6
1,245,238	-		Ac3H11_2927	0.35	-0.1
1,245,498	+				-0.1
1,245,498	+				-1.8
1,245,498	+				-0.7
1,245,498	+				+1.5
1,245,498	+				+0.2
1,245,499	-				+2.4
1,245,499	-				-0.1
1,245,499	-				+0.7
1,245,499	-				-2.0
1,245,621	+				+0.8
1,245,621	+				+2.9
1,245,621	+				+1.2
1,245,621	+				+1.1
1,245,621	+				+2.5
1,245,621	+				+1.4
1,245,621	+				+0.5
1,245,621	+				+0.0
1,245,621	+				+0.0
1,245,622	-				-0.4
1,245,622	-				+0.2
1,245,622	-				-0.1
1,245,622	-				+0.5
1,245,623	+				-1.8
1,245,623	+				-0.8
1,245,677	-				+0.9
1,245,838	+		Ac3H11_2928	0.13	+0.0
1,245,838	+		Ac3H11_2928	0.13	+0.2
1,245,838	+		Ac3H11_2928	0.13	+0.5
1,245,838	+		Ac3H11_2928	0.13	-0.0
1,245,838	+		Ac3H11_2928	0.13	+1.5
1,245,839	-		Ac3H11_2928	0.13	+1.5
1,245,839	-		Ac3H11_2928	0.13	+3.2
1,246,004	-		Ac3H11_2928	0.26	+0.8
1,246,030	+		Ac3H11_2928	0.28	-1.5
1,246,031	-		Ac3H11_2928	0.28	-2.5
1,246,160	+		Ac3H11_2928	0.38	-0.6
1,246,160	+		Ac3H11_2928	0.38	-0.1
1,246,161	-		Ac3H11_2928	0.38	+0.9
1,246,161	-		Ac3H11_2928	0.38	-2.5
1,246,161	-		Ac3H11_2928	0.38	-0.3
1,246,279	+		Ac3H11_2928	0.47	+0.1
1,246,279	+		Ac3H11_2928	0.47	+0.8
1,246,280	-		Ac3H11_2928	0.47	+3.1
1,246,280	-		Ac3H11_2928	0.47	+0.8
1,246,280	-		Ac3H11_2928	0.47	-0.1
1,246,405	+		Ac3H11_2928	0.56	-0.7
1,246,406	-		Ac3H11_2928	0.56	+1.3
1,246,406	-		Ac3H11_2928	0.56	+3.0