Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2787 and Ac3H11_2788 are separated by 70 nucleotides Ac3H11_2788 and Ac3H11_2789 overlap by 4 nucleotides Ac3H11_2789 and Ac3H11_2790 are separated by 234 nucleotides Ac3H11_2790 and Ac3H11_2791 are separated by 282 nucleotides
Ac3H11_2787 - hypothetical protein, at 1,094,143 to 1,094,589
_2787
Ac3H11_2788 - hypothetical protein, at 1,094,660 to 1,094,908
_2788
Ac3H11_2789 - hypothetical protein, at 1,094,905 to 1,095,249
_2789
Ac3H11_2790 - DNA primase (EC 2.7.7.-), phage-associated, at 1,095,484 to 1,096,488
_2790
Ac3H11_2791 - Phage protein, at 1,096,771 to 1,097,814
_2791
Position (kb)
1095
1096
1097 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1094.733 kb on - strand, within Ac3H11_2788 at 1094.733 kb on - strand, within Ac3H11_2788 at 1095.071 kb on - strand, within Ac3H11_2789 at 1095.071 kb on - strand, within Ac3H11_2789 at 1095.071 kb on - strand, within Ac3H11_2789 at 1095.325 kb on + strand at 1095.325 kb on + strand at 1095.670 kb on + strand, within Ac3H11_2790 at 1095.670 kb on + strand, within Ac3H11_2790 at 1095.919 kb on - strand, within Ac3H11_2790 at 1096.063 kb on + strand, within Ac3H11_2790 at 1096.064 kb on - strand, within Ac3H11_2790 at 1096.064 kb on - strand, within Ac3H11_2790 at 1096.297 kb on + strand, within Ac3H11_2790 at 1096.298 kb on - strand, within Ac3H11_2790 at 1096.346 kb on - strand, within Ac3H11_2790 at 1096.764 kb on + strand at 1096.855 kb on - strand at 1096.909 kb on + strand, within Ac3H11_2791 at 1096.963 kb on + strand, within Ac3H11_2791 at 1096.963 kb on + strand, within Ac3H11_2791 at 1096.969 kb on + strand, within Ac3H11_2791 at 1097.120 kb on - strand, within Ac3H11_2791 at 1097.120 kb on - strand, within Ac3H11_2791 at 1097.120 kb on - strand, within Ac3H11_2791 at 1097.120 kb on - strand, within Ac3H11_2791 at 1097.206 kb on + strand, within Ac3H11_2791 at 1097.206 kb on + strand, within Ac3H11_2791 at 1097.206 kb on + strand, within Ac3H11_2791 at 1097.206 kb on + strand, within Ac3H11_2791 at 1097.207 kb on - strand, within Ac3H11_2791 at 1097.207 kb on - strand, within Ac3H11_2791 at 1097.277 kb on + strand, within Ac3H11_2791 at 1097.329 kb on + strand, within Ac3H11_2791
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 1,094,733 - Ac3H11_2788 0.29 +1.6 1,094,733 - Ac3H11_2788 0.29 +0.8 1,095,071 - Ac3H11_2789 0.48 +1.2 1,095,071 - Ac3H11_2789 0.48 -0.9 1,095,071 - Ac3H11_2789 0.48 -0.9 1,095,325 + -2.0 1,095,325 + +1.4 1,095,670 + Ac3H11_2790 0.19 -0.0 1,095,670 + Ac3H11_2790 0.19 +0.3 1,095,919 - Ac3H11_2790 0.43 -3.6 1,096,063 + Ac3H11_2790 0.58 +0.7 1,096,064 - Ac3H11_2790 0.58 -1.2 1,096,064 - Ac3H11_2790 0.58 +1.0 1,096,297 + Ac3H11_2790 0.81 -1.9 1,096,298 - Ac3H11_2790 0.81 -2.0 1,096,346 - Ac3H11_2790 0.86 +1.4 1,096,764 + -0.7 1,096,855 - -1.9 1,096,909 + Ac3H11_2791 0.13 +1.3 1,096,963 + Ac3H11_2791 0.18 -0.1 1,096,963 + Ac3H11_2791 0.18 +0.7 1,096,969 + Ac3H11_2791 0.19 -1.7 1,097,120 - Ac3H11_2791 0.33 +1.1 1,097,120 - Ac3H11_2791 0.33 -2.2 1,097,120 - Ac3H11_2791 0.33 +2.2 1,097,120 - Ac3H11_2791 0.33 +1.2 1,097,206 + Ac3H11_2791 0.42 -0.0 1,097,206 + Ac3H11_2791 0.42 -1.3 1,097,206 + Ac3H11_2791 0.42 -0.6 1,097,206 + Ac3H11_2791 0.42 -0.4 1,097,207 - Ac3H11_2791 0.42 -0.1 1,097,207 - Ac3H11_2791 0.42 -0.1 1,097,277 + Ac3H11_2791 0.48 +0.3 1,097,329 + Ac3H11_2791 0.53 +0.8
Or see this region's nucleotide sequence