Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2267 and Ac3H11_2268 are separated by 321 nucleotides Ac3H11_2268 and Ac3H11_2269 are separated by 36 nucleotides Ac3H11_2269 and Ac3H11_2270 overlap by 8 nucleotides
Ac3H11_2267 - Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44), at 500,360 to 500,713
_2267
Ac3H11_2268 - hypothetical protein, at 501,035 to 501,520
_2268
Ac3H11_2269 - Sensory box histidine kinase/response regulator, at 501,557 to 504,610
_2269
Ac3H11_2270 - Pole remodelling regulatory diguanylate cyclase, at 504,603 to 505,772
_2270
Position (kb) 501
502
503
504
505 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.634 kb on - strand, within Ac3H11_2267 at 500.634 kb on - strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.788 kb on + strand at 500.788 kb on + strand at 500.789 kb on - strand at 500.789 kb on - strand at 500.789 kb on - strand at 500.789 kb on - strand at 500.817 kb on + strand at 500.877 kb on - strand at 500.877 kb on - strand at 500.877 kb on - strand at 500.879 kb on + strand at 500.879 kb on + strand at 500.879 kb on + strand at 500.880 kb on - strand at 500.880 kb on - strand at 500.880 kb on - strand at 500.923 kb on + strand at 500.924 kb on - strand at 500.925 kb on + strand at 500.926 kb on - strand at 500.951 kb on - strand at 501.065 kb on + strand at 501.065 kb on + strand at 501.066 kb on - strand at 501.066 kb on - strand at 501.066 kb on - strand at 501.224 kb on + strand, within Ac3H11_2268 at 501.323 kb on + strand, within Ac3H11_2268 at 501.323 kb on + strand, within Ac3H11_2268 at 501.323 kb on + strand, within Ac3H11_2268 at 501.323 kb on + strand, within Ac3H11_2268 at 501.324 kb on - strand, within Ac3H11_2268 at 501.324 kb on - strand, within Ac3H11_2268 at 501.473 kb on + strand at 501.473 kb on + strand at 501.474 kb on - strand at 501.474 kb on - strand at 501.474 kb on - strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.476 kb on + strand at 501.477 kb on - strand at 501.477 kb on - strand at 501.477 kb on - strand at 501.477 kb on - strand at 501.518 kb on + strand at 501.518 kb on + strand at 501.611 kb on + strand at 501.611 kb on + strand at 501.611 kb on + strand at 501.611 kb on + strand at 501.611 kb on + strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.612 kb on - strand at 501.635 kb on + strand at 501.635 kb on + strand at 501.636 kb on - strand at 501.636 kb on - strand at 501.720 kb on - strand at 501.769 kb on + strand at 501.797 kb on + strand at 501.798 kb on - strand at 501.872 kb on + strand, within Ac3H11_2269 at 501.872 kb on + strand, within Ac3H11_2269 at 501.872 kb on + strand, within Ac3H11_2269 at 501.872 kb on + strand, within Ac3H11_2269 at 501.872 kb on + strand, within Ac3H11_2269 at 501.872 kb on + strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 501.873 kb on - strand, within Ac3H11_2269 at 502.472 kb on + strand, within Ac3H11_2269 at 502.472 kb on + strand, within Ac3H11_2269 at 502.472 kb on + strand, within Ac3H11_2269 at 502.473 kb on - strand, within Ac3H11_2269 at 502.473 kb on - strand, within Ac3H11_2269 at 502.473 kb on - strand, within Ac3H11_2269 at 502.473 kb on - strand, within Ac3H11_2269 at 502.666 kb on - strand, within Ac3H11_2269 at 503.666 kb on + strand, within Ac3H11_2269 at 503.666 kb on + strand, within Ac3H11_2269 at 504.041 kb on + strand, within Ac3H11_2269 at 504.042 kb on - strand, within Ac3H11_2269 at 504.042 kb on - strand, within Ac3H11_2269 at 504.042 kb on - strand, within Ac3H11_2269 at 504.172 kb on + strand, within Ac3H11_2269 at 504.173 kb on - strand, within Ac3H11_2269 at 504.259 kb on - strand, within Ac3H11_2269 at 504.259 kb on - strand, within Ac3H11_2269 at 504.259 kb on - strand, within Ac3H11_2269 at 504.259 kb on - strand, within Ac3H11_2269 at 504.497 kb on + strand at 504.497 kb on + strand at 504.498 kb on - strand at 504.498 kb on - strand at 504.498 kb on - strand at 504.498 kb on - strand at 504.498 kb on - strand at 504.527 kb on + strand at 504.527 kb on + strand at 504.528 kb on - strand at 504.528 kb on - strand at 504.528 kb on - strand at 504.609 kb on - strand at 504.616 kb on + strand at 504.702 kb on + strand at 504.702 kb on + strand at 504.703 kb on - strand at 504.703 kb on - strand at 504.703 kb on - strand at 504.810 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.930 kb on + strand, within Ac3H11_2270 at 504.931 kb on - strand, within Ac3H11_2270 at 504.931 kb on - strand, within Ac3H11_2270 at 504.931 kb on - strand, within Ac3H11_2270 at 505.161 kb on + strand, within Ac3H11_2270 at 505.161 kb on + strand, within Ac3H11_2270 at 505.161 kb on + strand, within Ac3H11_2270 at 505.161 kb on + strand, within Ac3H11_2270 at 505.161 kb on + strand, within Ac3H11_2270 at 505.161 kb on + strand, within Ac3H11_2270 at 505.162 kb on - strand, within Ac3H11_2270 at 505.162 kb on - strand, within Ac3H11_2270 at 505.162 kb on - strand, within Ac3H11_2270 at 505.162 kb on - strand, within Ac3H11_2270 at 505.391 kb on + strand, within Ac3H11_2270 at 505.437 kb on + strand, within Ac3H11_2270 at 505.437 kb on + strand, within Ac3H11_2270 at 505.437 kb on + strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.438 kb on - strand, within Ac3H11_2270 at 505.536 kb on + strand, within Ac3H11_2270 at 505.536 kb on + strand, within Ac3H11_2270 at 505.536 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.563 kb on + strand, within Ac3H11_2270 at 505.564 kb on - strand, within Ac3H11_2270 at 505.564 kb on - strand, within Ac3H11_2270 at 505.564 kb on - strand, within Ac3H11_2270 at 505.564 kb on - strand, within Ac3H11_2270 at 505.564 kb on - strand, within Ac3H11_2270
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 500,633 + Ac3H11_2267 0.77 +0.4 500,633 + Ac3H11_2267 0.77 +1.5 500,633 + Ac3H11_2267 0.77 +0.2 500,633 + Ac3H11_2267 0.77 -0.0 500,633 + Ac3H11_2267 0.77 +0.1 500,633 + Ac3H11_2267 0.77 +0.8 500,633 + Ac3H11_2267 0.77 +0.8 500,633 + Ac3H11_2267 0.77 -0.2 500,633 + Ac3H11_2267 0.77 -1.7 500,634 - Ac3H11_2267 0.77 -0.2 500,634 - Ac3H11_2267 0.77 -1.5 500,660 + Ac3H11_2267 0.85 -1.8 500,660 + Ac3H11_2267 0.85 +1.0 500,660 + Ac3H11_2267 0.85 +1.1 500,660 + Ac3H11_2267 0.85 -0.5 500,661 - Ac3H11_2267 0.85 -1.4 500,661 - Ac3H11_2267 0.85 -0.7 500,661 - Ac3H11_2267 0.85 -0.1 500,661 - Ac3H11_2267 0.85 -1.3 500,661 - Ac3H11_2267 0.85 +1.3 500,661 - Ac3H11_2267 0.85 +1.7 500,661 - Ac3H11_2267 0.85 -0.3 500,788 + -2.4 500,788 + +0.6 500,789 - -0.2 500,789 - +3.5 500,789 - +0.9 500,789 - -0.5 500,817 + -1.6 500,877 - +0.2 500,877 - -0.9 500,877 - -2.3 500,879 + +1.1 500,879 + -0.9 500,879 + -0.2 500,880 - -1.2 500,880 - +1.1 500,880 - -0.2 500,923 + -0.8 500,924 - -0.4 500,925 + -0.0 500,926 - +2.3 500,951 - +0.4 501,065 + -2.4 501,065 + -1.0 501,066 - +0.1 501,066 - -1.3 501,066 - -0.6 501,224 + Ac3H11_2268 0.39 +0.5 501,323 + Ac3H11_2268 0.59 +1.6 501,323 + Ac3H11_2268 0.59 -2.2 501,323 + Ac3H11_2268 0.59 -0.3 501,323 + Ac3H11_2268 0.59 +1.0 501,324 - Ac3H11_2268 0.59 +0.0 501,324 - Ac3H11_2268 0.59 +0.4 501,473 + -1.6 501,473 + -0.2 501,474 - +1.0 501,474 - -1.1 501,474 - -0.7 501,476 + -2.9 501,476 + +0.6 501,476 + -1.6 501,476 + +0.7 501,476 + +2.3 501,476 + -0.2 501,476 + -1.1 501,476 + -1.4 501,476 + -1.4 501,476 + +0.5 501,477 - +0.8 501,477 - -0.8 501,477 - -0.8 501,477 - -2.6 501,518 + +0.4 501,518 + -3.4 501,611 + -0.3 501,611 + +0.6 501,611 + -0.3 501,611 + +1.4 501,611 + -1.8 501,612 - +0.3 501,612 - -2.4 501,612 - +1.5 501,612 - +0.0 501,612 - +1.1 501,612 - -1.5 501,612 - -0.3 501,612 - +1.7 501,612 - -1.9 501,612 - -1.9 501,612 - -0.9 501,612 - -1.2 501,612 - -0.6 501,635 + -0.3 501,635 + -0.0 501,636 - -1.4 501,636 - +1.2 501,720 - +0.8 501,769 + +1.4 501,797 + +1.0 501,798 - +0.7 501,872 + Ac3H11_2269 0.10 -0.8 501,872 + Ac3H11_2269 0.10 -0.1 501,872 + Ac3H11_2269 0.10 +3.0 501,872 + Ac3H11_2269 0.10 -0.1 501,872 + Ac3H11_2269 0.10 -2.7 501,872 + Ac3H11_2269 0.10 +1.3 501,873 - Ac3H11_2269 0.10 -1.2 501,873 - Ac3H11_2269 0.10 -0.3 501,873 - Ac3H11_2269 0.10 +0.2 501,873 - Ac3H11_2269 0.10 +0.2 501,873 - Ac3H11_2269 0.10 +0.6 501,873 - Ac3H11_2269 0.10 +0.2 501,873 - Ac3H11_2269 0.10 -0.6 501,873 - Ac3H11_2269 0.10 +0.6 501,873 - Ac3H11_2269 0.10 -0.2 502,472 + Ac3H11_2269 0.30 -0.0 502,472 + Ac3H11_2269 0.30 +0.9 502,472 + Ac3H11_2269 0.30 +0.7 502,473 - Ac3H11_2269 0.30 -0.6 502,473 - Ac3H11_2269 0.30 -0.5 502,473 - Ac3H11_2269 0.30 -0.3 502,473 - Ac3H11_2269 0.30 +1.0 502,666 - Ac3H11_2269 0.36 -2.3 503,666 + Ac3H11_2269 0.69 -2.9 503,666 + Ac3H11_2269 0.69 +2.3 504,041 + Ac3H11_2269 0.81 -3.2 504,042 - Ac3H11_2269 0.81 +0.0 504,042 - Ac3H11_2269 0.81 -0.0 504,042 - Ac3H11_2269 0.81 +1.3 504,172 + Ac3H11_2269 0.86 -0.0 504,173 - Ac3H11_2269 0.86 -0.1 504,259 - Ac3H11_2269 0.88 -3.1 504,259 - Ac3H11_2269 0.88 -0.1 504,259 - Ac3H11_2269 0.88 -1.3 504,259 - Ac3H11_2269 0.88 +2.6 504,497 + +2.0 504,497 + +3.3 504,498 - +8.2 504,498 - +0.9 504,498 - -2.4 504,498 - +1.4 504,498 - +0.2 504,527 + -0.6 504,527 + -0.2 504,528 - -0.2 504,528 - +2.0 504,528 - -1.8 504,609 - -0.0 504,616 + -2.7 504,702 + +1.1 504,702 + -2.0 504,703 - +0.6 504,703 - +1.4 504,703 - -0.1 504,810 + Ac3H11_2270 0.18 +0.9 504,930 + Ac3H11_2270 0.28 +2.9 504,930 + Ac3H11_2270 0.28 +0.3 504,930 + Ac3H11_2270 0.28 +1.0 504,930 + Ac3H11_2270 0.28 -0.5 504,930 + Ac3H11_2270 0.28 -1.6 504,930 + Ac3H11_2270 0.28 +0.2 504,930 + Ac3H11_2270 0.28 -0.8 504,930 + Ac3H11_2270 0.28 -1.5 504,931 - Ac3H11_2270 0.28 +0.6 504,931 - Ac3H11_2270 0.28 +2.7 504,931 - Ac3H11_2270 0.28 -2.8 505,161 + Ac3H11_2270 0.48 +1.4 505,161 + Ac3H11_2270 0.48 -0.5 505,161 + Ac3H11_2270 0.48 -0.7 505,161 + Ac3H11_2270 0.48 -0.8 505,161 + Ac3H11_2270 0.48 +0.0 505,161 + Ac3H11_2270 0.48 +1.2 505,162 - Ac3H11_2270 0.48 +1.2 505,162 - Ac3H11_2270 0.48 +0.4 505,162 - Ac3H11_2270 0.48 -1.1 505,162 - Ac3H11_2270 0.48 -0.8 505,391 + Ac3H11_2270 0.67 +1.9 505,437 + Ac3H11_2270 0.71 -0.6 505,437 + Ac3H11_2270 0.71 -0.5 505,437 + Ac3H11_2270 0.71 -0.9 505,438 - Ac3H11_2270 0.71 +2.3 505,438 - Ac3H11_2270 0.71 -1.3 505,438 - Ac3H11_2270 0.71 -0.9 505,438 - Ac3H11_2270 0.71 -3.3 505,438 - Ac3H11_2270 0.71 -2.8 505,438 - Ac3H11_2270 0.71 -0.2 505,438 - Ac3H11_2270 0.71 -1.4 505,536 + Ac3H11_2270 0.80 +0.7 505,536 + Ac3H11_2270 0.80 -1.6 505,536 + Ac3H11_2270 0.80 -1.5 505,563 + Ac3H11_2270 0.82 -0.7 505,563 + Ac3H11_2270 0.82 -0.7 505,563 + Ac3H11_2270 0.82 -1.4 505,563 + Ac3H11_2270 0.82 -1.4 505,563 + Ac3H11_2270 0.82 +0.7 505,563 + Ac3H11_2270 0.82 +1.3 505,563 + Ac3H11_2270 0.82 +0.4 505,564 - Ac3H11_2270 0.82 +2.2 505,564 - Ac3H11_2270 0.82 -0.7 505,564 - Ac3H11_2270 0.82 +0.5 505,564 - Ac3H11_2270 0.82 +0.4 505,564 - Ac3H11_2270 0.82 -0.5
Or see this region's nucleotide sequence