Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13840 and AZOBR_RS13845 are separated by 89 nucleotides AZOBR_RS13845 and AZOBR_RS13850 are separated by 388 nucleotides AZOBR_RS13850 and AZOBR_RS13855 are separated by 204 nucleotides AZOBR_RS13855 and AZOBR_RS13860 are separated by 7 nucleotides
AZOBR_RS13840: AZOBR_RS13840 - hypothetical protein, at 2,915,565 to 2,915,750
_RS13840
AZOBR_RS13845: AZOBR_RS13845 - hypothetical protein, at 2,915,840 to 2,916,238
_RS13845
AZOBR_RS13850: AZOBR_RS13850 - hypothetical protein, at 2,916,627 to 2,916,869
_RS13850
AZOBR_RS13855: AZOBR_RS13855 - hypothetical protein, at 2,917,074 to 2,917,601
_RS13855
AZOBR_RS13860: AZOBR_RS13860 - hypothetical protein, at 2,917,609 to 2,917,914
_RS13860
Position (kb)
2916
2917 Strain fitness (log2 ratio)
-2
-1
0
1 at 2915.763 kb on + strand at 2915.764 kb on - strand at 2915.788 kb on + strand at 2915.789 kb on - strand at 2915.793 kb on + strand at 2915.793 kb on + strand at 2915.793 kb on + strand at 2915.793 kb on + strand at 2915.794 kb on - strand at 2915.794 kb on - strand at 2915.909 kb on + strand, within AZOBR_RS13845 at 2916.213 kb on - strand at 2916.216 kb on - strand at 2916.216 kb on - strand at 2916.285 kb on + strand at 2916.286 kb on - strand at 2916.528 kb on + strand at 2916.695 kb on - strand, within AZOBR_RS13850 at 2916.837 kb on + strand, within AZOBR_RS13850 at 2916.838 kb on - strand, within AZOBR_RS13850 at 2916.841 kb on - strand, within AZOBR_RS13850 at 2916.841 kb on - strand, within AZOBR_RS13850 at 2916.941 kb on + strand at 2916.941 kb on + strand at 2916.941 kb on + strand at 2916.942 kb on - strand at 2917.065 kb on + strand at 2917.065 kb on + strand at 2917.065 kb on + strand at 2917.065 kb on + strand at 2917.066 kb on - strand at 2917.066 kb on - strand at 2917.098 kb on + strand at 2917.600 kb on - strand at 2917.664 kb on - strand, within AZOBR_RS13860
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,915,763 + -2.0 2,915,764 - +0.8 2,915,788 + -0.5 2,915,789 - +0.6 2,915,793 + -0.5 2,915,793 + +0.1 2,915,793 + -0.4 2,915,793 + +0.1 2,915,794 - +0.9 2,915,794 - -0.4 2,915,909 + AZOBR_RS13845 0.17 -1.6 2,916,213 - +1.1 2,916,216 - +0.5 2,916,216 - +0.3 2,916,285 + +0.5 2,916,286 - +1.2 2,916,528 + +0.4 2,916,695 - AZOBR_RS13850 0.28 -0.6 2,916,837 + AZOBR_RS13850 0.86 -0.6 2,916,838 - AZOBR_RS13850 0.87 -0.3 2,916,841 - AZOBR_RS13850 0.88 -0.6 2,916,841 - AZOBR_RS13850 0.88 -0.7 2,916,941 + -0.7 2,916,941 + -1.0 2,916,941 + -1.3 2,916,942 - -0.2 2,917,065 + -0.4 2,917,065 + -0.6 2,917,065 + +1.0 2,917,065 + -0.4 2,917,066 - -1.9 2,917,066 - +0.2 2,917,098 + -1.2 2,917,600 - +0.2 2,917,664 - AZOBR_RS13860 0.18 -0.5
Or see this region's nucleotide sequence