Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS10685

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS10680 and AZOBR_RS10685 are separated by 87 nucleotidesAZOBR_RS10685 and AZOBR_RS10690 are separated by 292 nucleotides AZOBR_RS10680: AZOBR_RS10680 - adenylosuccinate synthetase, at 2,241,183 to 2,242,475 _RS10680 AZOBR_RS10685: AZOBR_RS10685 - ATP phosphoribosyltransferase, at 2,242,563 to 2,243,726 _RS10685 AZOBR_RS10690: AZOBR_RS10690 - hypothetical protein, at 2,244,019 to 2,245,728 _RS10690 Position (kb) 2242 2243 2244Strain fitness (log2 ratio) -3 -2 -1 0 1at 2242.778 kb on - strand, within AZOBR_RS10685at 2242.778 kb on - strand, within AZOBR_RS10685at 2242.778 kb on - strand, within AZOBR_RS10685at 2244.041 kb on - strandat 2244.041 kb on - strandat 2244.055 kb on + strandat 2244.055 kb on + strandat 2244.056 kb on - strandat 2244.056 kb on - strandat 2244.056 kb on - strandat 2244.344 kb on - strand, within AZOBR_RS10690at 2244.344 kb on - strand, within AZOBR_RS10690at 2244.344 kb on - strand, within AZOBR_RS10690

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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2,242,778 - AZOBR_RS10685 0.18 -3.3
2,242,778 - AZOBR_RS10685 0.18 -1.6
2,242,778 - AZOBR_RS10685 0.18 -1.7
2,244,041 - -0.6
2,244,041 - +0.5
2,244,055 + +0.7
2,244,055 + -1.0
2,244,056 - +0.6
2,244,056 - -0.0
2,244,056 - -1.4
2,244,344 - AZOBR_RS10690 0.19 -0.0
2,244,344 - AZOBR_RS10690 0.19 +1.3
2,244,344 - AZOBR_RS10690 0.19 +0.3

Or see this region's nucleotide sequence