Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05045 and AZOBR_RS05050 are separated by 121 nucleotides AZOBR_RS05050 and AZOBR_RS05055 are separated by 119 nucleotides AZOBR_RS05055 and AZOBR_RS05060 are separated by 1 nucleotides
AZOBR_RS05045: AZOBR_RS05045 - glucose-6-phosphate isomerase, at 1,069,429 to 1,071,072
_RS05045
AZOBR_RS05050: AZOBR_RS05050 - hypothetical protein, at 1,071,194 to 1,071,415
_RS05050
AZOBR_RS05055: AZOBR_RS05055 - zinc protease, at 1,071,535 to 1,072,899
_RS05055
AZOBR_RS05060: AZOBR_RS05060 - zinc protease, at 1,072,901 to 1,074,223
_RS05060
Position (kb) 1071
1072
1073 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1070.658 kb on - strand, within AZOBR_RS05045 at 1071.107 kb on + strand at 1071.107 kb on + strand at 1071.169 kb on + strand at 1071.170 kb on - strand at 1071.170 kb on - strand at 1071.183 kb on + strand at 1071.184 kb on - strand at 1071.408 kb on + strand at 1071.409 kb on - strand at 1071.424 kb on - strand at 1071.782 kb on + strand, within AZOBR_RS05055 at 1071.782 kb on + strand, within AZOBR_RS05055 at 1071.783 kb on - strand, within AZOBR_RS05055 at 1071.783 kb on - strand, within AZOBR_RS05055 at 1071.935 kb on + strand, within AZOBR_RS05055 at 1071.935 kb on + strand, within AZOBR_RS05055 at 1071.936 kb on - strand, within AZOBR_RS05055 at 1071.936 kb on - strand, within AZOBR_RS05055 at 1071.941 kb on + strand, within AZOBR_RS05055 at 1071.942 kb on - strand, within AZOBR_RS05055 at 1071.951 kb on - strand, within AZOBR_RS05055 at 1072.019 kb on + strand, within AZOBR_RS05055 at 1072.019 kb on + strand, within AZOBR_RS05055 at 1072.019 kb on + strand, within AZOBR_RS05055 at 1072.020 kb on - strand, within AZOBR_RS05055 at 1072.349 kb on + strand, within AZOBR_RS05055 at 1072.376 kb on + strand, within AZOBR_RS05055 at 1072.397 kb on + strand, within AZOBR_RS05055 at 1072.397 kb on + strand, within AZOBR_RS05055 at 1072.398 kb on - strand, within AZOBR_RS05055 at 1072.574 kb on + strand, within AZOBR_RS05055 at 1072.628 kb on + strand, within AZOBR_RS05055 at 1073.103 kb on + strand, within AZOBR_RS05060 at 1073.332 kb on - strand, within AZOBR_RS05060 at 1073.373 kb on - strand, within AZOBR_RS05060 at 1073.392 kb on - strand, within AZOBR_RS05060 at 1073.413 kb on - strand, within AZOBR_RS05060 at 1073.551 kb on - strand, within AZOBR_RS05060 at 1073.553 kb on + strand, within AZOBR_RS05060 at 1073.553 kb on + strand, within AZOBR_RS05060 at 1073.553 kb on + strand, within AZOBR_RS05060 at 1073.628 kb on + strand, within AZOBR_RS05060 at 1073.628 kb on + strand, within AZOBR_RS05060 at 1073.629 kb on - strand, within AZOBR_RS05060 at 1073.640 kb on + strand, within AZOBR_RS05060 at 1073.641 kb on - strand, within AZOBR_RS05060 at 1073.724 kb on + strand, within AZOBR_RS05060 at 1073.724 kb on + strand, within AZOBR_RS05060 at 1073.725 kb on - strand, within AZOBR_RS05060 at 1073.725 kb on - strand, within AZOBR_RS05060
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,070,658 - AZOBR_RS05045 0.75 -0.7 1,071,107 + +0.2 1,071,107 + -1.5 1,071,169 + +0.2 1,071,170 - +0.3 1,071,170 - -0.9 1,071,183 + +0.3 1,071,184 - -1.6 1,071,408 + -0.5 1,071,409 - -0.3 1,071,424 - +0.3 1,071,782 + AZOBR_RS05055 0.18 -0.9 1,071,782 + AZOBR_RS05055 0.18 -0.2 1,071,783 - AZOBR_RS05055 0.18 +0.9 1,071,783 - AZOBR_RS05055 0.18 +0.2 1,071,935 + AZOBR_RS05055 0.29 +0.3 1,071,935 + AZOBR_RS05055 0.29 +1.7 1,071,936 - AZOBR_RS05055 0.29 -0.3 1,071,936 - AZOBR_RS05055 0.29 -0.0 1,071,941 + AZOBR_RS05055 0.30 +0.0 1,071,942 - AZOBR_RS05055 0.30 +0.1 1,071,951 - AZOBR_RS05055 0.30 +0.1 1,072,019 + AZOBR_RS05055 0.35 -1.5 1,072,019 + AZOBR_RS05055 0.35 +0.3 1,072,019 + AZOBR_RS05055 0.35 -0.7 1,072,020 - AZOBR_RS05055 0.36 -0.7 1,072,349 + AZOBR_RS05055 0.60 +0.7 1,072,376 + AZOBR_RS05055 0.62 -0.7 1,072,397 + AZOBR_RS05055 0.63 -0.1 1,072,397 + AZOBR_RS05055 0.63 -0.7 1,072,398 - AZOBR_RS05055 0.63 +0.2 1,072,574 + AZOBR_RS05055 0.76 +0.2 1,072,628 + AZOBR_RS05055 0.80 +0.9 1,073,103 + AZOBR_RS05060 0.15 +0.9 1,073,332 - AZOBR_RS05060 0.33 +0.4 1,073,373 - AZOBR_RS05060 0.36 +0.6 1,073,392 - AZOBR_RS05060 0.37 -0.0 1,073,413 - AZOBR_RS05060 0.39 +1.3 1,073,551 - AZOBR_RS05060 0.49 -0.5 1,073,553 + AZOBR_RS05060 0.49 -1.9 1,073,553 + AZOBR_RS05060 0.49 -0.1 1,073,553 + AZOBR_RS05060 0.49 -0.1 1,073,628 + AZOBR_RS05060 0.55 +2.6 1,073,628 + AZOBR_RS05060 0.55 -0.6 1,073,629 - AZOBR_RS05060 0.55 -0.9 1,073,640 + AZOBR_RS05060 0.56 +0.0 1,073,641 - AZOBR_RS05060 0.56 -0.1 1,073,724 + AZOBR_RS05060 0.62 +0.6 1,073,724 + AZOBR_RS05060 0.62 -0.3 1,073,725 - AZOBR_RS05060 0.62 +0.6 1,073,725 - AZOBR_RS05060 0.62 -0.9
Or see this region's nucleotide sequence