Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1244 and DvMF_1245 are separated by 213 nucleotides DvMF_1245 and DvMF_1246 are separated by 537 nucleotides
DvMF_1244: DvMF_1244 - hypothetical protein (RefSeq), at 1,535,338 to 1,536,393
_1244
DvMF_1245: DvMF_1245 - molybdopterin oxidoreductase (RefSeq), at 1,536,607 to 1,539,450
_1245
DvMF_1246: DvMF_1246 - D-alanine--D-alanine ligase (RefSeq), at 1,539,988 to 1,541,214
_1246
Position (kb)
1536
1537
1538
1539
1540 Strain fitness (log2 ratio)
-1
0
1 at 1535.741 kb on - strand, within DvMF_1244 at 1535.741 kb on - strand, within DvMF_1244 at 1535.874 kb on + strand, within DvMF_1244 at 1536.004 kb on + strand, within DvMF_1244 at 1536.077 kb on + strand, within DvMF_1244 at 1536.163 kb on - strand, within DvMF_1244 at 1536.283 kb on - strand, within DvMF_1244 at 1536.499 kb on + strand at 1536.917 kb on - strand, within DvMF_1245 at 1536.974 kb on - strand, within DvMF_1245 at 1537.048 kb on - strand, within DvMF_1245 at 1537.048 kb on - strand, within DvMF_1245 at 1537.300 kb on + strand, within DvMF_1245 at 1537.373 kb on - strand, within DvMF_1245 at 1537.449 kb on + strand, within DvMF_1245 at 1537.464 kb on + strand, within DvMF_1245 at 1537.464 kb on + strand, within DvMF_1245 at 1537.549 kb on + strand, within DvMF_1245 at 1537.553 kb on - strand, within DvMF_1245 at 1537.684 kb on - strand, within DvMF_1245 at 1537.695 kb on + strand, within DvMF_1245 at 1537.695 kb on + strand, within DvMF_1245 at 1538.320 kb on - strand, within DvMF_1245 at 1538.458 kb on + strand, within DvMF_1245 at 1538.479 kb on - strand, within DvMF_1245 at 1538.564 kb on - strand, within DvMF_1245 at 1538.565 kb on + strand, within DvMF_1245 at 1538.651 kb on - strand, within DvMF_1245 at 1538.751 kb on + strand, within DvMF_1245 at 1538.913 kb on - strand, within DvMF_1245 at 1538.961 kb on + strand, within DvMF_1245 at 1539.010 kb on + strand, within DvMF_1245 at 1539.189 kb on - strand at 1539.418 kb on + strand at 1539.504 kb on + strand at 1539.523 kb on + strand at 1539.531 kb on - strand at 1539.531 kb on - strand at 1539.596 kb on + strand at 1539.664 kb on - strand at 1539.678 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,535,741 - DvMF_1244 0.38 +0.4 1,535,741 - DvMF_1244 0.38 -0.3 1,535,874 + DvMF_1244 0.51 -0.2 1,536,004 + DvMF_1244 0.63 +0.3 1,536,077 + DvMF_1244 0.70 -0.3 1,536,163 - DvMF_1244 0.78 +0.1 1,536,283 - DvMF_1244 0.89 -0.1 1,536,499 + +0.3 1,536,917 - DvMF_1245 0.11 -0.3 1,536,974 - DvMF_1245 0.13 -0.4 1,537,048 - DvMF_1245 0.16 -0.5 1,537,048 - DvMF_1245 0.16 -0.5 1,537,300 + DvMF_1245 0.24 -1.1 1,537,373 - DvMF_1245 0.27 -0.0 1,537,449 + DvMF_1245 0.30 -0.0 1,537,464 + DvMF_1245 0.30 +0.2 1,537,464 + DvMF_1245 0.30 -0.2 1,537,549 + DvMF_1245 0.33 +0.0 1,537,553 - DvMF_1245 0.33 -0.4 1,537,684 - DvMF_1245 0.38 -0.2 1,537,695 + DvMF_1245 0.38 -0.1 1,537,695 + DvMF_1245 0.38 +0.4 1,538,320 - DvMF_1245 0.60 -0.2 1,538,458 + DvMF_1245 0.65 -0.2 1,538,479 - DvMF_1245 0.66 -0.1 1,538,564 - DvMF_1245 0.69 -0.5 1,538,565 + DvMF_1245 0.69 -0.1 1,538,651 - DvMF_1245 0.72 -0.2 1,538,751 + DvMF_1245 0.75 -0.3 1,538,913 - DvMF_1245 0.81 -0.3 1,538,961 + DvMF_1245 0.83 -0.6 1,539,010 + DvMF_1245 0.84 -0.4 1,539,189 - -0.5 1,539,418 + -0.6 1,539,504 + +0.3 1,539,523 + +0.4 1,539,531 - -0.0 1,539,531 - -0.4 1,539,596 + +0.7 1,539,664 - -0.1 1,539,678 + +0.1
Or see this region's nucleotide sequence