Strain Fitness in Shewanella loihica PV-4 around Shew_2703

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,197,683	-		Shew_2702	0.25	-0.5
3,197,693	-		Shew_2702	0.26	+0.1
3,197,693	-		Shew_2702	0.26	+0.6
3,197,806	-		Shew_2702	0.41	-0.3
3,198,068	+		Shew_2702	0.75	-1.8
3,198,195	-				+0.9
3,198,195	-				-1.9
3,198,255	+				+0.3
3,198,649	-				+0.2
3,198,667	+		Shew_2703	0.11	+0.2
3,198,680	-		Shew_2703	0.11	+0.3
3,198,717	+		Shew_2703	0.13	+2.0
3,198,730	-		Shew_2703	0.14	+0.2
3,198,782	-		Shew_2703	0.16	+0.6
3,198,801	+		Shew_2703	0.17	+0.8
3,198,836	+		Shew_2703	0.19	+0.4
3,198,841	+		Shew_2703	0.19	+0.4
3,198,842	+		Shew_2703	0.19	-1.3
3,198,842	+		Shew_2703	0.19	+1.6
3,198,850	-		Shew_2703	0.20	+0.3
3,198,883	-		Shew_2703	0.21	+0.0
3,198,955	-		Shew_2703	0.25	-2.5
3,198,980	+		Shew_2703	0.26	+0.5
3,198,980	+		Shew_2703	0.26	-0.5
3,198,988	-		Shew_2703	0.26	+0.7
3,198,988	-		Shew_2703	0.26	-0.8
3,198,988	-		Shew_2703	0.26	-0.6
3,199,020	-		Shew_2703	0.28	-0.3
3,199,066	-		Shew_2703	0.30	-0.5
3,199,086	+		Shew_2703	0.31	+0.1
3,199,113	-		Shew_2703	0.32	+0.3
3,199,164	+		Shew_2703	0.35	-0.1
3,199,172	-		Shew_2703	0.35	+0.7
3,199,218	-		Shew_2703	0.37	-0.0
3,199,300	-		Shew_2703	0.41	-0.1
3,199,300	+		Shew_2703	0.41	-0.5
3,199,300	+		Shew_2703	0.41	-0.0
3,199,303	-		Shew_2703	0.41	+0.5
3,199,308	-		Shew_2703	0.42	+0.1
3,199,308	-		Shew_2703	0.42	-0.2
3,199,308	-		Shew_2703	0.42	-0.6
3,199,308	-		Shew_2703	0.42	-0.3
3,199,317	+		Shew_2703	0.42	+1.0
3,199,317	+		Shew_2703	0.42	+0.4
3,199,317	+		Shew_2703	0.42	+0.5
3,199,325	-		Shew_2703	0.42	+0.1
3,199,346	+		Shew_2703	0.43	+0.7
3,199,381	+		Shew_2703	0.45	+1.5
3,199,381	+		Shew_2703	0.45	-1.1
3,199,381	+		Shew_2703	0.45	+0.3
3,199,381	+		Shew_2703	0.45	+6.1
3,199,389	-		Shew_2703	0.45	+0.7
3,199,389	-		Shew_2703	0.45	+0.1
3,199,389	-		Shew_2703	0.45	+0.5
3,199,389	-		Shew_2703	0.45	-0.0
3,199,389	-		Shew_2703	0.45	+0.7
3,199,389	-		Shew_2703	0.45	-0.0
3,199,389	-		Shew_2703	0.45	+0.2
3,199,441	+		Shew_2703	0.48	-0.0
3,199,445	+		Shew_2703	0.48	+0.1
3,199,448	-		Shew_2703	0.48	-4.2
3,199,449	-		Shew_2703	0.48	+0.7
3,199,460	-		Shew_2703	0.49	+1.2
3,199,491	-		Shew_2703	0.50	-0.1
3,199,582	-		Shew_2703	0.55	-0.6
3,199,584	+		Shew_2703	0.55	+0.4
3,199,584	+		Shew_2703	0.55	+0.4
3,199,584	+		Shew_2703	0.55	+0.2
3,199,584	+		Shew_2703	0.55	-0.1
3,199,589	+		Shew_2703	0.55	+0.7
3,199,589	+		Shew_2703	0.55	+0.2
3,199,589	+		Shew_2703	0.55	-0.7
3,199,589	+		Shew_2703	0.55	+0.3
3,199,589	+		Shew_2703	0.55	+0.4
3,199,590	+		Shew_2703	0.55	+0.1
3,199,592	-		Shew_2703	0.55	-0.5
3,199,597	-		Shew_2703	0.55	-0.0
3,199,598	-		Shew_2703	0.56	+0.3
3,199,598	-		Shew_2703	0.56	-0.4
3,199,599	-		Shew_2703	0.56	+0.3
3,199,605	-		Shew_2703	0.56	-0.4
3,199,627	-		Shew_2703	0.57	+0.2
3,199,632	-		Shew_2703	0.57	+0.2
3,199,656	+		Shew_2703	0.58	+1.0
3,199,664	-		Shew_2703	0.59	+0.8
3,199,677	-		Shew_2703	0.59	+0.1
3,199,757	+		Shew_2703	0.63	+0.5
3,199,757	+		Shew_2703	0.63	+0.6
3,199,757	+		Shew_2703	0.63	+0.4
3,199,757	+		Shew_2703	0.63	-1.1
3,199,757	+		Shew_2703	0.63	-0.3
3,199,757	+		Shew_2703	0.63	+0.4
3,199,757	+		Shew_2703	0.63	-0.1
3,199,757	+		Shew_2703	0.63	-3.5
3,199,757	+		Shew_2703	0.63	+0.7
3,199,757	+		Shew_2703	0.63	+0.2
3,199,757	+		Shew_2703	0.63	-0.3
3,199,757	+		Shew_2703	0.63	+0.1
3,199,757	+		Shew_2703	0.63	-0.5
3,199,757	+		Shew_2703	0.63	-0.3
3,199,757	+		Shew_2703	0.63	-2.1
3,199,757	+		Shew_2703	0.63	-0.1
3,199,757	+		Shew_2703	0.63	+1.3
3,199,758	-		Shew_2703	0.63	-0.5
3,199,758	-		Shew_2703	0.63	-0.5
3,199,758	+		Shew_2703	0.63	+1.0
3,199,765	-		Shew_2703	0.64	+0.2
3,199,765	-		Shew_2703	0.64	-0.6
3,199,765	-		Shew_2703	0.64	+1.2
3,199,765	-		Shew_2703	0.64	+0.1
3,199,765	-		Shew_2703	0.64	-1.5
3,199,765	-		Shew_2703	0.64	+0.1
3,199,765	-		Shew_2703	0.64	+1.4
3,199,765	-		Shew_2703	0.64	+0.3
3,199,765	-		Shew_2703	0.64	+0.4
3,199,765	-		Shew_2703	0.64	+0.2
3,199,765	-		Shew_2703	0.64	-0.1
3,199,772	+		Shew_2703	0.64	-0.3
3,199,892	+		Shew_2703	0.70	-0.9
3,199,900	-		Shew_2703	0.70	+0.5
3,199,915	-		Shew_2703	0.71	+0.7
3,199,939	+		Shew_2703	0.72	-0.8
3,199,940	+		Shew_2703	0.72	+0.1
3,199,947	-		Shew_2703	0.72	-0.3
3,199,948	+		Shew_2703	0.72	+0.2
3,199,956	+		Shew_2703	0.73	+1.1
3,199,956	+		Shew_2703	0.73	+0.5
3,199,956	+		Shew_2703	0.73	+1.1
3,199,956	+		Shew_2703	0.73	-1.1
3,199,956	+		Shew_2703	0.73	-0.1
3,199,956	+		Shew_2703	0.73	+0.0
3,199,963	+		Shew_2703	0.73	+0.5
3,199,978	+		Shew_2703	0.74	+0.7
3,199,978	+		Shew_2703	0.74	+0.8
3,199,978	+		Shew_2703	0.74	+0.7
3,199,986	-		Shew_2703	0.74	-0.2
3,199,986	-		Shew_2703	0.74	+0.8
3,200,027	+		Shew_2703	0.76	-0.9
3,200,027	+		Shew_2703	0.76	+0.1
3,200,035	-		Shew_2703	0.77	+0.2
3,200,035	-		Shew_2703	0.77	+0.8
3,200,035	-		Shew_2703	0.77	+1.3
3,200,035	-		Shew_2703	0.77	+0.3
3,200,035	-		Shew_2703	0.77	+0.3
3,200,035	-		Shew_2703	0.77	+0.4
3,200,035	-		Shew_2703	0.77	+0.5
3,200,037	+		Shew_2703	0.77	+1.3
3,200,039	+		Shew_2703	0.77	+0.0
3,200,045	-		Shew_2703	0.77	+0.7
3,200,221	-		Shew_2703	0.85	+0.2
3,200,253	+		Shew_2703	0.87	-0.1
3,200,310	+		Shew_2703	0.90	-0.2
3,200,330	-				-1.8
3,200,361	-				+0.0
3,200,463	+				-0.3
3,200,554	+				+0.8
3,200,630	-				+0.3
3,200,955	+		Shew_2704	0.31	+0.3
3,200,992	+		Shew_2704	0.34	+0.2
3,201,175	+		Shew_2704	0.49	-0.8