Strain Fitness in Shewanella loihica PV-4 around Shew_0925

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,053,073	+				+0.4
1,053,178	+				+0.2
1,053,274	+				-0.5
1,053,295	+				-0.5
1,053,333	+				-1.6
1,053,351	+				+0.4
1,053,373	+				-0.1
1,053,381	-				-0.4
1,053,415	+				-0.1
1,053,415	+				-0.1
1,053,417	-				+0.1
1,053,465	-				+1.7
1,053,509	+				-0.3
1,053,509	+				-0.2
1,053,509	+				-0.0
1,053,509	+				-0.2
1,053,511	+				+1.7
1,053,516	+				+1.3
1,053,516	+				+0.6
1,053,521	+				-0.0
1,053,526	+				+0.3
1,053,531	+				-0.0
1,053,531	+				+0.5
1,053,531	+				-0.3
1,053,539	-				-0.0
1,053,539	-				+0.8
1,053,539	-				-0.1
1,053,553	+				+0.9
1,053,604	+				+0.3
1,053,639	+				+0.3
1,053,645	+				-2.3
1,053,653	-				+0.8
1,053,668	-				-0.2
1,053,669	-				+0.3
1,053,715	-				-5.2
1,053,716	+				+2.0
1,053,716	+				-0.5
1,053,726	+				+0.1
1,053,726	+				-0.2
1,053,726	+				-0.0
1,053,734	-				+0.5
1,053,735	+				-1.4
1,053,735	+				-1.3
1,053,736	-				-0.2
1,053,743	-				+0.9
1,053,743	-				+0.8
1,053,750	-				-0.1
1,053,765	+				+1.1
1,053,765	+				-0.2
1,053,797	-		Shew_0925	0.12	-0.6
1,053,798	-		Shew_0925	0.12	+0.0
1,053,800	-		Shew_0925	0.12	+0.7
1,053,801	-		Shew_0925	0.12	-1.6
1,053,844	-		Shew_0925	0.15	-0.6
1,053,844	-		Shew_0925	0.15	-0.9
1,053,858	+		Shew_0925	0.16	+0.5
1,053,891	+		Shew_0925	0.19	+0.3
1,053,891	+		Shew_0925	0.19	+1.9
1,053,891	+		Shew_0925	0.19	+0.1
1,053,891	+		Shew_0925	0.19	+0.2
1,053,891	+		Shew_0925	0.19	+0.6
1,053,891	+		Shew_0925	0.19	-1.3
1,053,891	+		Shew_0925	0.19	+0.5
1,053,896	+		Shew_0925	0.19	+0.3
1,053,899	-		Shew_0925	0.19	-0.2
1,053,899	-		Shew_0925	0.19	-0.2
1,053,899	-		Shew_0925	0.19	-0.1
1,053,899	-		Shew_0925	0.19	+0.2
1,053,899	-		Shew_0925	0.19	-4.7
1,053,899	-		Shew_0925	0.19	+0.2
1,053,899	-		Shew_0925	0.19	-0.6
1,053,899	-		Shew_0925	0.19	-0.3
1,053,904	-		Shew_0925	0.19	+0.3
1,053,904	-		Shew_0925	0.19	+0.2
1,053,915	+		Shew_0925	0.20	+1.0
1,053,935	+		Shew_0925	0.22	+0.5
1,053,951	-		Shew_0925	0.23	-0.7
1,053,995	+		Shew_0925	0.26	+0.5
1,053,995	+		Shew_0925	0.26	-0.3
1,054,003	-		Shew_0925	0.26	+0.7
1,054,003	-		Shew_0925	0.26	+0.0
1,054,003	-		Shew_0925	0.26	+0.2
1,054,003	-		Shew_0925	0.26	+0.2
1,054,003	-		Shew_0925	0.26	-1.1
1,054,025	+		Shew_0925	0.28	+1.3
1,054,030	+		Shew_0925	0.28	-0.6
1,054,030	+		Shew_0925	0.28	+1.4
1,054,030	+		Shew_0925	0.28	-1.1
1,054,030	+		Shew_0925	0.28	-1.3
1,054,030	+		Shew_0925	0.28	+1.1
1,054,030	+		Shew_0925	0.28	-0.5
1,054,030	+		Shew_0925	0.28	+0.0
1,054,030	+		Shew_0925	0.28	+0.8
1,054,030	+		Shew_0925	0.28	-1.4
1,054,030	+		Shew_0925	0.28	+0.6
1,054,030	+		Shew_0925	0.28	+0.3
1,054,030	+		Shew_0925	0.28	-0.1
1,054,030	+		Shew_0925	0.28	-1.3
1,054,030	+		Shew_0925	0.28	+0.4
1,054,030	+		Shew_0925	0.28	+0.3
1,054,030	+		Shew_0925	0.28	+0.4
1,054,030	+		Shew_0925	0.28	+0.1
1,054,030	+		Shew_0925	0.28	+0.7
1,054,030	+		Shew_0925	0.28	+0.5
1,054,030	+		Shew_0925	0.28	-0.9
1,054,030	+		Shew_0925	0.28	+0.4
1,054,030	+		Shew_0925	0.28	+1.6
1,054,030	+		Shew_0925	0.28	+0.5
1,054,030	+		Shew_0925	0.28	+0.0
1,054,030	+		Shew_0925	0.28	-0.9
1,054,030	+		Shew_0925	0.28	-0.0
1,054,030	+		Shew_0925	0.28	+0.2
1,054,030	+		Shew_0925	0.28	+0.8
1,054,030	+		Shew_0925	0.28	+1.1
1,054,030	+		Shew_0925	0.28	-1.7
1,054,030	+		Shew_0925	0.28	+1.0
1,054,030	+		Shew_0925	0.28	+0.1
1,054,030	+		Shew_0925	0.28	+0.0
1,054,030	+		Shew_0925	0.28	+1.0
1,054,030	+		Shew_0925	0.28	+0.3
1,054,030	+		Shew_0925	0.28	+0.4
1,054,030	+		Shew_0925	0.28	+1.7
1,054,030	+		Shew_0925	0.28	+0.7
1,054,030	+		Shew_0925	0.28	+0.6
1,054,030	+		Shew_0925	0.28	+0.1
1,054,030	+		Shew_0925	0.28	-2.3
1,054,030	+		Shew_0925	0.28	+1.8
1,054,030	+		Shew_0925	0.28	-0.1
1,054,030	+		Shew_0925	0.28	-1.3
1,054,030	+		Shew_0925	0.28	+0.6
1,054,038	-		Shew_0925	0.29	+0.1
1,054,038	-		Shew_0925	0.29	-0.0
1,054,038	-		Shew_0925	0.29	+0.3
1,054,038	-		Shew_0925	0.29	-0.1
1,054,038	-		Shew_0925	0.29	-1.2
1,054,038	-		Shew_0925	0.29	+0.5
1,054,038	-		Shew_0925	0.29	+1.0
1,054,038	-		Shew_0925	0.29	+0.1
1,054,038	-		Shew_0925	0.29	+0.4
1,054,038	-		Shew_0925	0.29	-0.0
1,054,038	-		Shew_0925	0.29	-0.2
1,054,038	-		Shew_0925	0.29	-0.4
1,054,038	-		Shew_0925	0.29	+0.0
1,054,038	-		Shew_0925	0.29	-0.2
1,054,038	-		Shew_0925	0.29	+0.1
1,054,038	-		Shew_0925	0.29	-0.2
1,054,038	-		Shew_0925	0.29	+0.3
1,054,038	-		Shew_0925	0.29	-0.4
1,054,038	-		Shew_0925	0.29	+0.5
1,054,038	-		Shew_0925	0.29	+0.3
1,054,038	-		Shew_0925	0.29	+0.6
1,054,038	-		Shew_0925	0.29	-0.2
1,054,038	-		Shew_0925	0.29	-0.9
1,054,038	-		Shew_0925	0.29	-0.0
1,054,038	-		Shew_0925	0.29	+1.1
1,054,038	-		Shew_0925	0.29	+0.2
1,054,038	-		Shew_0925	0.29	-0.0
1,054,038	-		Shew_0925	0.29	-0.9
1,054,038	-		Shew_0925	0.29	+0.1
1,054,038	-		Shew_0925	0.29	+0.4
1,054,038	-		Shew_0925	0.29	+1.5
1,054,038	-		Shew_0925	0.29	-0.4
1,054,038	-		Shew_0925	0.29	+0.5
1,054,038	-		Shew_0925	0.29	+0.0
1,054,038	-		Shew_0925	0.29	+0.0
1,054,038	-		Shew_0925	0.29	-0.4
1,054,038	-		Shew_0925	0.29	+0.0
1,054,038	-		Shew_0925	0.29	-0.9
1,054,038	-		Shew_0925	0.29	-0.0
1,054,038	-		Shew_0925	0.29	+0.4
1,054,038	-		Shew_0925	0.29	+0.6
1,054,038	-		Shew_0925	0.29	-0.6
1,054,038	-		Shew_0925	0.29	+0.3
1,054,043	-		Shew_0925	0.29	+0.1
1,054,049	-		Shew_0925	0.29	-1.1
1,054,057	-		Shew_0925	0.30	-0.5
1,054,057	-		Shew_0925	0.30	+0.2
1,054,061	+		Shew_0925	0.30	+0.6
1,054,061	+		Shew_0925	0.30	+1.1
1,054,061	+		Shew_0925	0.30	+0.9
1,054,061	+		Shew_0925	0.30	+0.8
1,054,061	+		Shew_0925	0.30	+0.6
1,054,068	-		Shew_0925	0.31	-0.5
1,054,069	-		Shew_0925	0.31	+0.1
1,054,131	+		Shew_0925	0.35	-1.4
1,054,131	+		Shew_0925	0.35	+0.9
1,054,131	+		Shew_0925	0.35	+0.2
1,054,131	+		Shew_0925	0.35	+0.7
1,054,131	+		Shew_0925	0.35	-0.1
1,054,131	+		Shew_0925	0.35	-0.3
1,054,131	+		Shew_0925	0.35	+1.5
1,054,131	+		Shew_0925	0.35	+1.4
1,054,131	+		Shew_0925	0.35	-0.4
1,054,131	+		Shew_0925	0.35	-0.3
1,054,131	+		Shew_0925	0.35	-0.6
1,054,131	+		Shew_0925	0.35	-0.6
1,054,131	+		Shew_0925	0.35	+0.5
1,054,131	+		Shew_0925	0.35	-0.3
1,054,131	+		Shew_0925	0.35	+0.4
1,054,131	+		Shew_0925	0.35	-1.4
1,054,131	+		Shew_0925	0.35	+0.1
1,054,131	+		Shew_0925	0.35	+0.5
1,054,131	+		Shew_0925	0.35	+1.5
1,054,131	+		Shew_0925	0.35	+1.3
1,054,131	+		Shew_0925	0.35	-0.2
1,054,131	+		Shew_0925	0.35	+0.8
1,054,131	+		Shew_0925	0.35	-0.3
1,054,131	+		Shew_0925	0.35	+3.5
1,054,131	+		Shew_0925	0.35	+1.3
1,054,131	+		Shew_0925	0.35	+0.2
1,054,131	+		Shew_0925	0.35	-0.7
1,054,131	+		Shew_0925	0.35	+0.5
1,054,131	+		Shew_0925	0.35	-1.2
1,054,131	+		Shew_0925	0.35	+0.4
1,054,131	+		Shew_0925	0.35	+1.0
1,054,131	+		Shew_0925	0.35	+0.1
1,054,131	+		Shew_0925	0.35	+0.4
1,054,131	+		Shew_0925	0.35	-1.3
1,054,131	+		Shew_0925	0.35	-1.1
1,054,131	+		Shew_0925	0.35	+0.2
1,054,132	+		Shew_0925	0.35	-0.3
1,054,132	-		Shew_0925	0.35	+0.3
1,054,139	-		Shew_0925	0.35	+1.9
1,054,139	-		Shew_0925	0.35	-0.1
1,054,139	-		Shew_0925	0.35	+0.9
1,054,139	-		Shew_0925	0.35	+0.0
1,054,139	-		Shew_0925	0.35	-0.1
1,054,139	-		Shew_0925	0.35	-1.9
1,054,139	-		Shew_0925	0.35	-0.9
1,054,139	-		Shew_0925	0.35	-0.2
1,054,139	-		Shew_0925	0.35	+0.4
1,054,139	-		Shew_0925	0.35	-0.1
1,054,139	-		Shew_0925	0.35	+0.5
1,054,139	-		Shew_0925	0.35	-0.1
1,054,139	-		Shew_0925	0.35	+0.3
1,054,139	-		Shew_0925	0.35	-0.3
1,054,139	-		Shew_0925	0.35	+0.1
1,054,139	-		Shew_0925	0.35	+0.3
1,054,139	-		Shew_0925	0.35	-0.3
1,054,139	-		Shew_0925	0.35	-0.1
1,054,139	-		Shew_0925	0.35	+0.1
1,054,139	-		Shew_0925	0.35	+0.1
1,054,139	-		Shew_0925	0.35	+0.3
1,054,139	-		Shew_0925	0.35	+0.1
1,054,139	-		Shew_0925	0.35	+0.2
1,054,139	-		Shew_0925	0.35	+5.9
1,054,139	-		Shew_0925	0.35	-1.3
1,054,139	-		Shew_0925	0.35	+0.3
1,054,139	-		Shew_0925	0.35	+0.1
1,054,139	-		Shew_0925	0.35	+0.4
1,054,139	-		Shew_0925	0.35	-0.4
1,054,139	-		Shew_0925	0.35	+1.1
1,054,159	+		Shew_0925	0.37	+0.5
1,054,198	+		Shew_0925	0.39	+0.3
1,054,220	+		Shew_0925	0.41	-1.1
1,054,220	+		Shew_0925	0.41	-0.4
1,054,242	+		Shew_0925	0.42	+0.5
1,054,279	-		Shew_0925	0.45	+0.1
1,054,279	-		Shew_0925	0.45	+0.6
1,054,283	+		Shew_0925	0.45	+0.1
1,054,283	+		Shew_0925	0.45	+0.5
1,054,291	-		Shew_0925	0.46	+0.3
1,054,291	-		Shew_0925	0.46	+0.8
1,054,297	+		Shew_0925	0.46	+0.1
1,054,308	+		Shew_0925	0.47	+0.2
1,054,395	+		Shew_0925	0.53	+0.5
1,054,405	+		Shew_0925	0.54	+0.5
1,054,405	+		Shew_0925	0.54	+0.9
1,054,405	+		Shew_0925	0.54	-0.2
1,054,413	-		Shew_0925	0.54	+0.2
1,054,413	-		Shew_0925	0.54	-0.2
1,054,413	-		Shew_0925	0.54	+0.1
1,054,457	-		Shew_0925	0.57	+0.2
1,054,461	+		Shew_0925	0.57	+0.3
1,054,485	+		Shew_0925	0.59	+0.6
1,054,485	+		Shew_0925	0.59	+0.1
1,054,485	+		Shew_0925	0.59	+0.1
1,054,493	-		Shew_0925	0.60	-0.8
1,054,493	-		Shew_0925	0.60	-0.3
1,054,554	+		Shew_0925	0.64	-0.3
1,054,577	+		Shew_0925	0.65	-2.0
1,054,577	+		Shew_0925	0.65	-0.3
1,054,577	+		Shew_0925	0.65	+0.7
1,054,586	+		Shew_0925	0.66	+0.3
1,054,587	+		Shew_0925	0.66	+0.3
1,054,587	+		Shew_0925	0.66	+0.5
1,054,587	+		Shew_0925	0.66	+0.1
1,054,587	+		Shew_0925	0.66	+0.2
1,054,587	+		Shew_0925	0.66	+0.5
1,054,594	-		Shew_0925	0.66	+0.2
1,054,594	-		Shew_0925	0.66	-0.7
1,054,594	-		Shew_0925	0.66	+1.3
1,054,595	-		Shew_0925	0.67	+0.5
1,054,595	-		Shew_0925	0.67	-0.3
1,054,595	-		Shew_0925	0.67	+0.3
1,054,595	-		Shew_0925	0.67	+0.2
1,054,595	-		Shew_0925	0.67	-0.1
1,054,595	-		Shew_0925	0.67	+0.5
1,054,595	-		Shew_0925	0.67	-0.0
1,054,595	-		Shew_0925	0.67	+0.2
1,054,595	-		Shew_0925	0.67	+1.1
1,054,595	-		Shew_0925	0.67	+0.8
1,054,595	-		Shew_0925	0.67	+0.0
1,054,596	+		Shew_0925	0.67	+0.9
1,054,596	+		Shew_0925	0.67	-0.4
1,054,596	+		Shew_0925	0.67	+1.1
1,054,600	+		Shew_0925	0.67	+0.2
1,054,601	+		Shew_0925	0.67	+0.3
1,054,601	+		Shew_0925	0.67	+1.8
1,054,601	+		Shew_0925	0.67	+0.9
1,054,601	+		Shew_0925	0.67	+0.7
1,054,601	+		Shew_0925	0.67	-0.1
1,054,601	+		Shew_0925	0.67	+2.2
1,054,601	+		Shew_0925	0.67	-0.3
1,054,604	-		Shew_0925	0.67	-1.5
1,054,604	-		Shew_0925	0.67	-0.0
1,054,604	-		Shew_0925	0.67	+0.7
1,054,609	+		Shew_0925	0.67	+0.0
1,054,609	-		Shew_0925	0.67	+0.6
1,054,609	+		Shew_0925	0.67	-0.3
1,054,609	-		Shew_0925	0.67	+1.2
1,054,609	-		Shew_0925	0.67	+0.3
1,054,609	-		Shew_0925	0.67	-0.8
1,054,617	-		Shew_0925	0.68	+0.2
1,054,617	-		Shew_0925	0.68	+0.2
1,054,617	-		Shew_0925	0.68	+0.1
1,054,617	-		Shew_0925	0.68	+0.6
1,054,646	-		Shew_0925	0.70	+1.5
1,054,672	+		Shew_0925	0.72	+0.5
1,054,702	+		Shew_0925	0.74	-0.3
1,054,702	+		Shew_0925	0.74	-0.3
1,054,710	+		Shew_0925	0.74	+1.6
1,054,727	+		Shew_0925	0.76	+0.2
1,054,727	+		Shew_0925	0.76	+0.1
1,054,727	+		Shew_0925	0.76	-1.3
1,054,727	+		Shew_0925	0.76	-0.1
1,054,727	+		Shew_0925	0.76	+0.6
1,054,727	+		Shew_0925	0.76	-0.5
1,054,727	+		Shew_0925	0.76	-0.3
1,054,727	+		Shew_0925	0.76	+1.3
1,054,727	+		Shew_0925	0.76	+0.0
1,054,727	+		Shew_0925	0.76	-0.6
1,054,727	+		Shew_0925	0.76	+0.6
1,054,735	-		Shew_0925	0.76	+0.5
1,054,735	-		Shew_0925	0.76	+0.5
1,054,735	-		Shew_0925	0.76	-0.2
1,054,735	-		Shew_0925	0.76	+0.5
1,054,735	-		Shew_0925	0.76	+0.1
1,054,735	-		Shew_0925	0.76	-0.5
1,054,763	+		Shew_0925	0.78	+0.5
1,054,771	+		Shew_0925	0.79	-4.0
1,054,773	-		Shew_0925	0.79	-0.1
1,054,773	-		Shew_0925	0.79	+0.1
1,054,784	+		Shew_0925	0.79	+0.5
1,054,802	-		Shew_0925	0.81	+0.8
1,054,874	+		Shew_0925	0.86	+0.6
1,054,885	+		Shew_0925	0.86	+0.9
1,054,893	-		Shew_0925	0.87	-0.4
1,054,893	-		Shew_0925	0.87	+0.5
1,054,893	-		Shew_0925	0.87	+0.0
1,054,893	-		Shew_0925	0.87	-0.0
1,054,910	+		Shew_0925	0.88	+0.3
1,054,910	+		Shew_0925	0.88	+0.5
1,054,910	+		Shew_0925	0.88	+0.0
1,054,910	+		Shew_0925	0.88	+1.0
1,054,910	+		Shew_0925	0.88	+0.5
1,054,912	+		Shew_0925	0.88	-2.1
1,054,918	-		Shew_0925	0.89	-0.2
1,054,918	-		Shew_0925	0.89	-0.5
1,054,918	-		Shew_0925	0.89	+0.1
1,054,918	-		Shew_0925	0.89	+0.4
1,054,918	-		Shew_0925	0.89	+0.2
1,054,918	-		Shew_0925	0.89	+1.3
1,054,918	-		Shew_0925	0.89	-0.4
1,054,918	-		Shew_0925	0.89	+0.1
1,054,918	-		Shew_0925	0.89	+0.3
1,054,926	-		Shew_0925	0.89	+0.5
1,054,927	-		Shew_0925	0.89	-0.3
1,054,941	+				+1.9
1,054,949	-				-0.7
1,054,949	-				-0.7
1,054,974	+				+0.5
1,054,974	-				-0.8
1,055,017	+				-0.3
1,055,017	+				+0.5
1,055,027	+				+0.4
1,055,027	+				+0.7
1,055,035	-				+0.0
1,055,035	-				+0.7
1,055,035	-				-0.1
1,055,035	-				+0.9
1,055,035	-				+0.3
1,055,035	-				-0.7
1,055,035	-				+0.4
1,055,040	-				+0.2
1,055,091	+				+0.5
1,055,091	+				-0.2
1,055,099	-				+1.0
1,055,099	-				+0.8
1,055,126	+				+0.5
1,055,134	-				-0.1
1,055,136	-				-0.1
1,055,140	+				+0.4
1,055,140	+				+0.6
1,055,140	+				+0.6
1,055,140	+				+1.5
1,055,142	-				-0.1
1,055,146	+				-0.1
1,055,148	-				-0.6
1,055,151	+				+1.0
1,055,151	+				-1.0
1,055,151	+				+0.2
1,055,154	-				-0.3
1,055,157	+				-0.6
1,055,201	+				-0.3
1,055,201	+				-1.3
1,055,201	+				+0.1
1,055,201	+				+0.1
1,055,201	+				+1.7
1,055,209	-				+0.2
1,055,211	+				-0.2
1,055,211	+				+0.6
1,055,227	+				-0.4
1,055,227	+				+0.9
1,055,233	+				+0.4
1,055,236	-				-0.4
1,055,236	-				-0.7
1,055,238	+				+2.2
1,055,238	+				-0.2
1,055,238	+				-0.8
1,055,238	+				+0.8
1,055,241	-		Shew_0926	0.10	+0.1
1,055,343	+		Shew_0926	0.26	-0.0
1,055,407	+		Shew_0926	0.35	+0.6
1,055,560	+		Shew_0926	0.59	-0.1
1,055,561	+		Shew_0926	0.59	+0.3
1,055,667	-		Shew_0926	0.75	-0.1