Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0262 and Shew_0263 are separated by 70 nucleotides Shew_0263 and Shew_0264 overlap by 4 nucleotides Shew_0264 and Shew_0265 are separated by 129 nucleotides
Shew_0262: Shew_0262 - hypothetical protein (RefSeq), at 280,966 to 282,420
_0262
Shew_0263: Shew_0263 - hypothetical protein (RefSeq), at 282,491 to 282,796
_0263
Shew_0264: Shew_0264 - serine/threonine protein kinase (RefSeq), at 282,793 to 283,794
_0264
Shew_0265: Shew_0265 - DSBA oxidoreductase (RefSeq), at 283,924 to 284,535
_0265
Position (kb) 282
283
284 Strain fitness (log2 ratio) -2
-1
0
1 at 281.923 kb on + strand, within Shew_0262 at 282.023 kb on + strand, within Shew_0262 at 282.296 kb on - strand at 282.601 kb on + strand, within Shew_0263 at 283.020 kb on + strand, within Shew_0264 at 283.087 kb on + strand, within Shew_0264 at 283.157 kb on + strand, within Shew_0264 at 283.157 kb on + strand, within Shew_0264 at 283.165 kb on - strand, within Shew_0264 at 283.347 kb on - strand, within Shew_0264 at 283.356 kb on + strand, within Shew_0264 at 284.091 kb on - strand, within Shew_0265 at 284.211 kb on - strand, within Shew_0265 at 284.366 kb on + strand, within Shew_0265 at 284.486 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 281,923 + Shew_0262 0.66 -0.1 282,023 + Shew_0262 0.73 -0.5 282,296 - -0.9 282,601 + Shew_0263 0.36 -0.2 283,020 + Shew_0264 0.23 -0.5 283,087 + Shew_0264 0.29 -0.7 283,157 + Shew_0264 0.36 +0.3 283,157 + Shew_0264 0.36 -2.5 283,165 - Shew_0264 0.37 -0.4 283,347 - Shew_0264 0.55 +0.4 283,356 + Shew_0264 0.56 -1.6 284,091 - Shew_0265 0.27 +0.8 284,211 - Shew_0265 0.47 +0.7 284,366 + Shew_0265 0.72 -0.7 284,486 - -0.2
Or see this region's nucleotide sequence