Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_323
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
145,675 | + | Ac3H11_322 | 0.28 | -1.3 | |
145,741 | + | Ac3H11_322 | 0.33 | -1.2 | |
145,741 | + | Ac3H11_322 | 0.33 | -0.2 | |
145,741 | + | -0.5 | |||
145,741 | + | Ac3H11_322 | 0.33 | -0.9 | |
145,742 | - | Ac3H11_322 | 0.33 | +2.8 | |
145,742 | - | Ac3H11_322 | 0.33 | +0.9 | |
145,742 | - | Ac3H11_322 | 0.33 | -1.3 | |
145,742 | - | Ac3H11_322 | 0.33 | +0.1 | |
145,742 | - | Ac3H11_322 | 0.33 | -1.3 | |
145,742 | - | Ac3H11_322 | 0.33 | -0.4 | |
145,742 | - | Ac3H11_322 | 0.33 | +0.3 | |
145,742 | - | Ac3H11_322 | 0.33 | +0.5 | |
145,742 | - | Ac3H11_322 | 0.33 | +2.0 | |
145,742 | - | Ac3H11_322 | 0.33 | +0.5 | |
145,822 | + | Ac3H11_322 | 0.40 | -0.7 | |
145,822 | + | Ac3H11_322 | 0.40 | -0.8 | |
145,822 | + | Ac3H11_322 | 0.40 | -0.3 | |
145,940 | + | Ac3H11_322 | 0.50 | +0.4 | |
145,940 | + | Ac3H11_322 | 0.50 | +0.8 | |
145,940 | + | Ac3H11_322 | 0.50 | -1.1 | |
145,940 | + | Ac3H11_322 | 0.50 | -0.3 | |
145,941 | - | Ac3H11_322 | 0.50 | -0.4 | |
145,941 | - | Ac3H11_322 | 0.50 | -2.0 | |
146,384 | - | Ac3H11_322 | 0.87 | +0.7 | |
146,544 | + | +0.8 | |||
146,544 | + | +0.3 | |||
146,544 | + | +0.6 | |||
146,544 | + | +1.5 | |||
146,544 | + | -1.5 | |||
146,594 | + | +1.3 | |||
146,595 | - | +0.1 | |||
147,035 | - | +1.5 | |||
147,035 | - | +1.4 |
Or see this region's nucleotide sequence