Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1985 and Ac3H11_1986 are separated by 88 nucleotides Ac3H11_1986 and Ac3H11_1987 are separated by 92 nucleotides Ac3H11_1987 and Ac3H11_1988 are separated by 101 nucleotides Ac3H11_1988 and Ac3H11_1989 are separated by 7 nucleotides
Ac3H11_1985 - Metallo-beta-lactamase family protein, at 201,148 to 202,854
_1985
Ac3H11_1986 - Maleate cis-trans isomerase (EC 5.2.1.1), at 202,943 to 203,695
_1986
Ac3H11_1987 - Tricarboxylate transport protein TctC, at 203,788 to 204,750
_1987
Ac3H11_1988 - transcriptional regulator, LysR family, at 204,852 to 205,721
_1988
Ac3H11_1989 - Putative drug efflux protein, at 205,729 to 206,931
_1989
Position (kb) 203
204
205 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 202.947 kb on + strand at 202.948 kb on - strand at 202.948 kb on - strand at 203.253 kb on + strand, within Ac3H11_1986 at 203.253 kb on + strand, within Ac3H11_1986 at 203.253 kb on + strand, within Ac3H11_1986 at 203.254 kb on - strand, within Ac3H11_1986 at 203.284 kb on + strand, within Ac3H11_1986 at 203.284 kb on + strand, within Ac3H11_1986 at 203.284 kb on + strand, within Ac3H11_1986 at 203.284 kb on + strand, within Ac3H11_1986 at 203.284 kb on + strand, within Ac3H11_1986 at 203.285 kb on - strand, within Ac3H11_1986 at 203.286 kb on + strand, within Ac3H11_1986 at 203.286 kb on + strand, within Ac3H11_1986 at 203.287 kb on - strand, within Ac3H11_1986 at 203.287 kb on - strand, within Ac3H11_1986 at 203.287 kb on - strand, within Ac3H11_1986 at 203.464 kb on - strand, within Ac3H11_1986 at 203.682 kb on + strand at 203.682 kb on + strand at 203.683 kb on - strand at 203.832 kb on - strand at 203.879 kb on + strand at 204.209 kb on + strand, within Ac3H11_1987 at 204.296 kb on + strand, within Ac3H11_1987 at 204.297 kb on - strand, within Ac3H11_1987 at 204.297 kb on - strand, within Ac3H11_1987 at 204.297 kb on - strand, within Ac3H11_1987 at 204.297 kb on - strand, within Ac3H11_1987 at 204.327 kb on - strand, within Ac3H11_1987 at 204.327 kb on - strand, within Ac3H11_1987 at 204.470 kb on + strand, within Ac3H11_1987 at 204.480 kb on - strand, within Ac3H11_1987 at 204.497 kb on + strand, within Ac3H11_1987 at 204.497 kb on + strand, within Ac3H11_1987 at 204.497 kb on + strand, within Ac3H11_1987 at 204.497 kb on + strand, within Ac3H11_1987 at 204.530 kb on + strand, within Ac3H11_1987 at 204.680 kb on + strand at 204.784 kb on + strand at 204.817 kb on + strand at 204.847 kb on + strand at 204.873 kb on + strand at 204.874 kb on - strand at 205.041 kb on + strand, within Ac3H11_1988 at 205.041 kb on + strand, within Ac3H11_1988 at 205.042 kb on - strand, within Ac3H11_1988 at 205.042 kb on - strand, within Ac3H11_1988 at 205.042 kb on - strand, within Ac3H11_1988 at 205.042 kb on - strand, within Ac3H11_1988
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 202,947 + +0.8 202,948 - -0.6 202,948 - -0.7 203,253 + Ac3H11_1986 0.41 +0.6 203,253 + Ac3H11_1986 0.41 -1.0 203,253 + Ac3H11_1986 0.41 -1.6 203,254 - Ac3H11_1986 0.41 +0.4 203,284 + Ac3H11_1986 0.45 -0.5 203,284 + Ac3H11_1986 0.45 -0.5 203,284 + Ac3H11_1986 0.45 +1.2 203,284 + Ac3H11_1986 0.45 -0.8 203,284 + Ac3H11_1986 0.45 -1.1 203,285 - Ac3H11_1986 0.45 -1.1 203,286 + Ac3H11_1986 0.46 +1.6 203,286 + Ac3H11_1986 0.46 -2.0 203,287 - Ac3H11_1986 0.46 -1.3 203,287 - Ac3H11_1986 0.46 -1.0 203,287 - Ac3H11_1986 0.46 +1.3 203,464 - Ac3H11_1986 0.69 +0.3 203,682 + -0.4 203,682 + -0.4 203,683 - -0.4 203,832 - -3.0 203,879 + -2.1 204,209 + Ac3H11_1987 0.44 -0.4 204,296 + Ac3H11_1987 0.53 -1.5 204,297 - Ac3H11_1987 0.53 +0.4 204,297 - Ac3H11_1987 0.53 -2.8 204,297 - Ac3H11_1987 0.53 +1.1 204,297 - Ac3H11_1987 0.53 +1.0 204,327 - Ac3H11_1987 0.56 -1.2 204,327 - Ac3H11_1987 0.56 -0.4 204,470 + Ac3H11_1987 0.71 -0.3 204,480 - Ac3H11_1987 0.72 -1.0 204,497 + Ac3H11_1987 0.74 +0.5 204,497 + Ac3H11_1987 0.74 -0.8 204,497 + Ac3H11_1987 0.74 +1.3 204,497 + Ac3H11_1987 0.74 -0.4 204,530 + Ac3H11_1987 0.77 -0.4 204,680 + +0.3 204,784 + +0.6 204,817 + -2.8 204,847 + -1.0 204,873 + -1.5 204,874 - +1.2 205,041 + Ac3H11_1988 0.22 -0.3 205,041 + Ac3H11_1988 0.22 +0.6 205,042 - Ac3H11_1988 0.22 +0.2 205,042 - Ac3H11_1988 0.22 -0.3 205,042 - Ac3H11_1988 0.22 -3.5 205,042 - Ac3H11_1988 0.22 -0.2
Or see this region's nucleotide sequence