Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1678 and Ac3H11_1679 overlap by 4 nucleotides Ac3H11_1679 and Ac3H11_1680 are separated by 12 nucleotides Ac3H11_1680 and Ac3H11_1681 are separated by 298 nucleotides
Ac3H11_1678 - macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides, at 281,644 to 282,954
_1678
Ac3H11_1679 - Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96), at 282,951 to 283,292
_1679
Ac3H11_1680 - Ribosome small subunit-stimulated GTPase EngC, at 283,305 to 284,249
_1680
Ac3H11_1681 - Similar to cobalamin biosynthesis protein CbiB, at 284,548 to 285,534
_1681
Position (kb) 283
284
285 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 282.406 kb on + strand, within Ac3H11_1678 at 282.445 kb on + strand, within Ac3H11_1678 at 282.446 kb on - strand, within Ac3H11_1678 at 282.613 kb on + strand, within Ac3H11_1678 at 282.613 kb on + strand, within Ac3H11_1678 at 282.613 kb on + strand, within Ac3H11_1678 at 282.613 kb on + strand, within Ac3H11_1678 at 282.613 kb on + strand, within Ac3H11_1678 at 282.614 kb on - strand, within Ac3H11_1678 at 282.614 kb on - strand, within Ac3H11_1678 at 282.639 kb on + strand, within Ac3H11_1678 at 282.639 kb on + strand, within Ac3H11_1678 at 282.639 kb on + strand, within Ac3H11_1678 at 282.639 kb on + strand, within Ac3H11_1678 at 282.640 kb on - strand, within Ac3H11_1678 at 282.784 kb on + strand, within Ac3H11_1678 at 282.784 kb on + strand, within Ac3H11_1678 at 282.784 kb on + strand, within Ac3H11_1678 at 282.784 kb on + strand, within Ac3H11_1678 at 282.785 kb on - strand, within Ac3H11_1678 at 282.838 kb on + strand at 282.838 kb on + strand at 282.838 kb on + strand at 282.838 kb on + strand at 282.838 kb on + strand at 282.838 kb on + strand at 282.839 kb on - strand at 282.839 kb on - strand at 282.839 kb on - strand at 282.877 kb on + strand at 282.877 kb on + strand at 282.878 kb on - strand at 282.889 kb on + strand at 282.889 kb on + strand at 282.890 kb on - strand at 282.890 kb on - strand at 282.892 kb on + strand at 283.095 kb on + strand, within Ac3H11_1679 at 283.110 kb on + strand, within Ac3H11_1679 at 283.191 kb on + strand, within Ac3H11_1679 at 283.192 kb on - strand, within Ac3H11_1679 at 284.245 kb on - strand at 284.301 kb on - strand at 284.337 kb on - strand at 284.357 kb on - strand at 284.357 kb on - strand at 284.366 kb on - strand at 284.366 kb on - strand at 284.529 kb on + strand at 284.529 kb on + strand at 284.529 kb on + strand at 285.017 kb on + strand, within Ac3H11_1681 at 285.017 kb on + strand, within Ac3H11_1681 at 285.018 kb on - strand, within Ac3H11_1681 at 285.114 kb on - strand, within Ac3H11_1681
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 282,406 + Ac3H11_1678 0.58 -0.1 282,445 + Ac3H11_1678 0.61 +0.9 282,446 - Ac3H11_1678 0.61 -0.9 282,613 + Ac3H11_1678 0.74 +1.7 282,613 + Ac3H11_1678 0.74 +0.3 282,613 + Ac3H11_1678 0.74 +0.9 282,613 + Ac3H11_1678 0.74 +0.2 282,613 + Ac3H11_1678 0.74 -2.1 282,614 - Ac3H11_1678 0.74 -0.9 282,614 - Ac3H11_1678 0.74 -2.4 282,639 + Ac3H11_1678 0.76 -0.1 282,639 + Ac3H11_1678 0.76 -0.7 282,639 + Ac3H11_1678 0.76 +0.1 282,639 + Ac3H11_1678 0.76 -0.3 282,640 - Ac3H11_1678 0.76 +0.0 282,784 + Ac3H11_1678 0.87 -0.5 282,784 + Ac3H11_1678 0.87 +0.3 282,784 + Ac3H11_1678 0.87 +1.1 282,784 + Ac3H11_1678 0.87 +0.1 282,785 - Ac3H11_1678 0.87 -2.4 282,838 + +1.3 282,838 + +0.6 282,838 + -1.0 282,838 + +0.1 282,838 + -0.3 282,838 + -2.6 282,839 - -1.4 282,839 - +0.6 282,839 - -3.3 282,877 + -0.1 282,877 + +0.4 282,878 - -1.1 282,889 + -0.1 282,889 + -0.5 282,890 - -0.9 282,890 - -0.1 282,892 + -0.5 283,095 + Ac3H11_1679 0.42 -3.3 283,110 + Ac3H11_1679 0.46 -2.0 283,191 + Ac3H11_1679 0.70 -2.4 283,192 - Ac3H11_1679 0.70 -1.1 284,245 - -0.1 284,301 - -0.3 284,337 - +0.6 284,357 - +0.0 284,357 - -1.1 284,366 - +1.1 284,366 - +0.1 284,529 + -1.3 284,529 + +0.4 284,529 + -0.4 285,017 + Ac3H11_1681 0.48 -1.6 285,017 + Ac3H11_1681 0.48 -3.1 285,018 - Ac3H11_1681 0.48 -0.1 285,114 - Ac3H11_1681 0.57 -2.9
Or see this region's nucleotide sequence