Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1211 and Ac3H11_1212 are separated by 72 nucleotides Ac3H11_1212 and Ac3H11_1213 are separated by 11 nucleotides
Ac3H11_1211 - Outer membrane protein assembly factor YaeT precursor, at 26,722 to 28,170
_1211
Ac3H11_1212 - Secretion protein HlyD precursor, at 28,243 to 29,454
_1212
Ac3H11_1213 - Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA, at 29,466 to 32,585
_1213
Position (kb) 28
29
30 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 27.587 kb on - strand, within Ac3H11_1211 at 27.587 kb on - strand, within Ac3H11_1211 at 27.832 kb on + strand, within Ac3H11_1211 at 28.088 kb on - strand at 28.328 kb on - strand at 28.328 kb on - strand at 28.792 kb on + strand, within Ac3H11_1212 at 28.792 kb on + strand, within Ac3H11_1212 at 28.793 kb on - strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.056 kb on + strand, within Ac3H11_1212 at 29.057 kb on - strand, within Ac3H11_1212 at 29.057 kb on - strand, within Ac3H11_1212 at 29.057 kb on - strand, within Ac3H11_1212 at 29.057 kb on - strand, within Ac3H11_1212 at 29.182 kb on + strand, within Ac3H11_1212 at 29.183 kb on - strand, within Ac3H11_1212 at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.473 kb on + strand at 29.474 kb on - strand at 29.474 kb on - strand at 29.474 kb on - strand at 29.474 kb on - strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.706 kb on + strand at 29.707 kb on - strand at 29.707 kb on - strand at 30.450 kb on + strand, within Ac3H11_1213 at 30.451 kb on - strand, within Ac3H11_1213 at 30.451 kb on - strand, within Ac3H11_1213 at 30.451 kb on - strand, within Ac3H11_1213
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 27,587 - Ac3H11_1211 0.60 -0.7 27,587 - Ac3H11_1211 0.60 +0.2 27,832 + Ac3H11_1211 0.77 -1.9 28,088 - +0.6 28,328 - -0.2 28,328 - -0.8 28,792 + Ac3H11_1212 0.45 -0.8 28,792 + Ac3H11_1212 0.45 -2.3 28,793 - Ac3H11_1212 0.45 +0.7 29,056 + Ac3H11_1212 0.67 +0.5 29,056 + Ac3H11_1212 0.67 -0.2 29,056 + Ac3H11_1212 0.67 +1.1 29,056 + Ac3H11_1212 0.67 -2.9 29,056 + Ac3H11_1212 0.67 +0.1 29,056 + Ac3H11_1212 0.67 +0.1 29,056 + Ac3H11_1212 0.67 -0.2 29,057 - Ac3H11_1212 0.67 -0.8 29,057 - Ac3H11_1212 0.67 -0.7 29,057 - Ac3H11_1212 0.67 +0.2 29,057 - Ac3H11_1212 0.67 +1.4 29,182 + Ac3H11_1212 0.77 +0.6 29,183 - Ac3H11_1212 0.78 +0.1 29,473 + +0.5 29,473 + -0.5 29,473 + +1.2 29,473 + +0.4 29,473 + +0.3 29,473 + +0.9 29,473 + +0.3 29,473 + -0.3 29,473 + -0.1 29,473 + +0.8 29,473 + +0.6 29,473 + +1.4 29,474 - -0.0 29,474 - -0.6 29,474 - +0.1 29,474 - -0.6 29,706 + -0.7 29,706 + -0.7 29,706 + -1.1 29,706 + -0.1 29,706 + +1.2 29,706 + -0.7 29,706 + -0.1 29,706 + -0.8 29,706 + -0.6 29,707 - -0.2 29,707 - -0.0 30,450 + Ac3H11_1213 0.32 -0.5 30,451 - Ac3H11_1213 0.32 +1.6 30,451 - Ac3H11_1213 0.32 -0.3 30,451 - Ac3H11_1213 0.32 +0.0
Or see this region's nucleotide sequence