Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26440 and AO353_26445 are separated by 111 nucleotides AO353_26445 and AO353_26450 are separated by 14 nucleotides AO353_26450 and AO353_26455 are separated by 79 nucleotides
AO353_26440: AO353_26440 - hypothetical protein, at 5,795,989 to 5,796,306
_26440
AO353_26445: AO353_26445 - hypothetical protein, at 5,796,418 to 5,796,822
_26445
AO353_26450: AO353_26450 - hypothetical protein, at 5,796,837 to 5,797,019
_26450
AO353_26455: AO353_26455 - Nin-like protein, at 5,797,099 to 5,797,956
_26455
Position (kb) 5796
5797
5798 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5795.860 kb on + strand at 5795.902 kb on + strand at 5795.902 kb on + strand at 5795.902 kb on + strand at 5795.940 kb on + strand at 5795.940 kb on + strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.941 kb on - strand at 5795.998 kb on + strand at 5795.998 kb on + strand at 5795.999 kb on - strand at 5795.999 kb on - strand at 5796.128 kb on - strand, within AO353_26440 at 5796.139 kb on + strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.140 kb on - strand, within AO353_26440 at 5796.150 kb on + strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.151 kb on - strand, within AO353_26440 at 5796.154 kb on + strand, within AO353_26440 at 5796.292 kb on + strand at 5796.292 kb on + strand at 5796.292 kb on + strand at 5796.292 kb on + strand at 5796.293 kb on - strand at 5796.293 kb on - strand at 5796.311 kb on - strand at 5796.311 kb on - strand at 5796.311 kb on - strand at 5796.331 kb on + strand at 5796.332 kb on - strand at 5796.356 kb on + strand at 5796.356 kb on + strand at 5796.356 kb on + strand at 5796.357 kb on - strand at 5796.357 kb on - strand at 5796.413 kb on + strand at 5796.413 kb on + strand at 5796.413 kb on + strand at 5796.414 kb on - strand at 5796.414 kb on - strand at 5796.414 kb on - strand at 5796.424 kb on + strand at 5796.424 kb on + strand at 5796.424 kb on + strand at 5796.425 kb on - strand at 5796.425 kb on - strand at 5796.436 kb on + strand at 5796.436 kb on + strand at 5796.436 kb on + strand at 5796.437 kb on - strand at 5796.437 kb on - strand at 5796.437 kb on - strand at 5796.437 kb on - strand at 5796.452 kb on - strand at 5796.529 kb on + strand, within AO353_26445 at 5796.530 kb on - strand, within AO353_26445 at 5796.530 kb on - strand, within AO353_26445 at 5796.540 kb on - strand, within AO353_26445 at 5796.540 kb on - strand, within AO353_26445 at 5796.540 kb on - strand, within AO353_26445 at 5796.577 kb on + strand, within AO353_26445 at 5796.578 kb on - strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.682 kb on + strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.683 kb on - strand, within AO353_26445 at 5796.746 kb on - strand, within AO353_26445 at 5796.755 kb on - strand, within AO353_26445 at 5796.778 kb on + strand, within AO353_26445 at 5796.778 kb on + strand, within AO353_26445 at 5796.779 kb on - strand, within AO353_26445 at 5796.779 kb on - strand, within AO353_26445 at 5796.780 kb on + strand, within AO353_26445 at 5796.781 kb on - strand, within AO353_26445 at 5796.781 kb on - strand, within AO353_26445 at 5796.781 kb on - strand, within AO353_26445 at 5796.781 kb on - strand, within AO353_26445 at 5796.799 kb on + strand at 5796.799 kb on + strand at 5796.800 kb on - strand at 5796.800 kb on - strand at 5796.800 kb on - strand at 5796.800 kb on - strand at 5796.800 kb on - strand at 5796.800 kb on - strand at 5796.835 kb on + strand at 5796.835 kb on + strand at 5796.835 kb on + strand at 5796.835 kb on + strand at 5796.835 kb on + strand at 5796.836 kb on - strand at 5796.836 kb on - strand at 5796.836 kb on - strand at 5796.836 kb on - strand at 5796.836 kb on - strand at 5796.838 kb on + strand at 5796.838 kb on + strand at 5796.854 kb on + strand at 5796.854 kb on + strand at 5796.854 kb on + strand at 5796.854 kb on + strand at 5796.855 kb on - strand at 5796.855 kb on - strand at 5796.858 kb on + strand, within AO353_26450 at 5796.858 kb on + strand, within AO353_26450 at 5796.858 kb on + strand, within AO353_26450 at 5796.877 kb on + strand, within AO353_26450 at 5796.878 kb on - strand, within AO353_26450 at 5796.878 kb on - strand, within AO353_26450 at 5796.878 kb on - strand, within AO353_26450 at 5796.878 kb on - strand, within AO353_26450 at 5796.878 kb on - strand at 5796.878 kb on - strand, within AO353_26450 at 5796.895 kb on - strand, within AO353_26450 at 5796.949 kb on - strand, within AO353_26450 at 5797.049 kb on + strand at 5797.049 kb on + strand at 5797.049 kb on + strand at 5797.049 kb on + strand at 5797.050 kb on - strand at 5797.050 kb on - strand at 5797.050 kb on - strand at 5797.050 kb on - strand at 5797.057 kb on + strand at 5797.057 kb on + strand at 5797.098 kb on + strand at 5797.098 kb on + strand at 5797.098 kb on + strand at 5797.098 kb on + strand at 5797.099 kb on - strand at 5797.099 kb on - strand at 5797.099 kb on - strand at 5797.108 kb on + strand at 5797.164 kb on + strand at 5797.164 kb on + strand at 5797.164 kb on + strand at 5797.165 kb on - strand at 5797.165 kb on - strand at 5797.165 kb on - strand at 5797.165 kb on - strand at 5797.165 kb on - strand at 5797.165 kb on - strand at 5797.165 kb on - strand at 5797.185 kb on + strand at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.298 kb on + strand, within AO353_26455 at 5797.299 kb on - strand, within AO353_26455 at 5797.299 kb on - strand, within AO353_26455 at 5797.299 kb on - strand, within AO353_26455 at 5797.299 kb on - strand, within AO353_26455 at 5797.299 kb on - strand, within AO353_26455 at 5797.300 kb on - strand, within AO353_26455 at 5797.402 kb on + strand, within AO353_26455 at 5797.403 kb on - strand, within AO353_26455 at 5797.465 kb on + strand, within AO353_26455 at 5797.465 kb on + strand, within AO353_26455 at 5797.466 kb on - strand, within AO353_26455 at 5797.673 kb on + strand, within AO353_26455 at 5797.673 kb on + strand, within AO353_26455 at 5797.673 kb on + strand, within AO353_26455 at 5797.674 kb on - strand, within AO353_26455 at 5797.674 kb on - strand, within AO353_26455 at 5797.674 kb on - strand, within AO353_26455 at 5797.674 kb on - strand, within AO353_26455 at 5797.704 kb on - strand, within AO353_26455 at 5797.704 kb on - strand, within AO353_26455 at 5797.704 kb on - strand, within AO353_26455 at 5797.710 kb on + strand, within AO353_26455 at 5797.710 kb on + strand, within AO353_26455 at 5797.711 kb on - strand, within AO353_26455 at 5797.711 kb on - strand, within AO353_26455 at 5797.711 kb on - strand, within AO353_26455 at 5797.711 kb on - strand, within AO353_26455 at 5797.750 kb on + strand, within AO353_26455 at 5797.750 kb on + strand, within AO353_26455 at 5797.750 kb on + strand, within AO353_26455 at 5797.750 kb on + strand at 5797.783 kb on + strand, within AO353_26455 at 5797.784 kb on - strand, within AO353_26455 at 5797.870 kb on + strand, within AO353_26455 at 5797.870 kb on + strand, within AO353_26455 at 5797.870 kb on + strand, within AO353_26455 at 5797.871 kb on - strand at 5797.871 kb on - strand at 5797.889 kb on - strand at 5797.897 kb on - strand at 5797.964 kb on + strand at 5797.964 kb on + strand at 5797.979 kb on + strand at 5797.979 kb on + strand at 5797.979 kb on + strand at 5797.980 kb on - strand at 5797.980 kb on - strand at 5797.980 kb on - strand at 5797.980 kb on - strand at 5797.980 kb on - strand at 5797.994 kb on - strand at 5798.012 kb on + strand at 5798.012 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 5,795,860 + -0.5 5,795,902 + +0.8 5,795,902 + -0.2 5,795,902 + -0.3 5,795,940 + -0.7 5,795,940 + -0.1 5,795,941 - +0.5 5,795,941 - -1.3 5,795,941 - +0.9 5,795,941 - -1.3 5,795,998 + -0.5 5,795,998 + +0.2 5,795,999 - -0.2 5,795,999 - +0.3 5,796,128 - AO353_26440 0.44 -1.1 5,796,139 + AO353_26440 0.47 -0.8 5,796,140 - AO353_26440 0.47 -0.5 5,796,140 - AO353_26440 0.47 -1.4 5,796,140 - AO353_26440 0.47 -1.1 5,796,150 + AO353_26440 0.51 -1.1 5,796,151 - AO353_26440 0.51 -0.5 5,796,151 - AO353_26440 0.51 +0.1 5,796,151 - AO353_26440 0.51 +0.5 5,796,154 + AO353_26440 0.52 -0.3 5,796,292 + +1.0 5,796,292 + -1.7 5,796,292 + -0.8 5,796,292 + +3.1 5,796,293 - -0.8 5,796,293 - -0.1 5,796,311 - -0.4 5,796,311 - +0.5 5,796,311 - -1.3 5,796,331 + +0.3 5,796,332 - -0.1 5,796,356 + +0.5 5,796,356 + -0.1 5,796,356 + +0.2 5,796,357 - -1.1 5,796,357 - -0.5 5,796,413 + -1.1 5,796,413 + -0.7 5,796,413 + -1.5 5,796,414 - +0.5 5,796,414 - +2.5 5,796,414 - -0.3 5,796,424 + -0.4 5,796,424 + +0.9 5,796,424 + +0.3 5,796,425 - -1.5 5,796,425 - -1.2 5,796,436 + +0.6 5,796,436 + -0.1 5,796,436 + -0.7 5,796,437 - +0.8 5,796,437 - -1.1 5,796,437 - -1.0 5,796,437 - +0.5 5,796,452 - -1.2 5,796,529 + AO353_26445 0.27 -0.8 5,796,530 - AO353_26445 0.28 -3.3 5,796,530 - AO353_26445 0.28 -0.2 5,796,540 - AO353_26445 0.30 +0.2 5,796,540 - AO353_26445 0.30 +0.2 5,796,540 - AO353_26445 0.30 -1.5 5,796,577 + AO353_26445 0.39 +0.2 5,796,578 - AO353_26445 0.40 -0.3 5,796,682 + AO353_26445 0.65 +1.5 5,796,682 + AO353_26445 0.65 -0.4 5,796,682 + AO353_26445 0.65 -1.4 5,796,682 + AO353_26445 0.65 -1.4 5,796,682 + AO353_26445 0.65 -1.1 5,796,682 + AO353_26445 0.65 +2.2 5,796,682 + AO353_26445 0.65 +0.0 5,796,682 + AO353_26445 0.65 +0.5 5,796,682 + AO353_26445 0.65 -2.1 5,796,682 + AO353_26445 0.65 +0.2 5,796,683 - AO353_26445 0.65 +0.5 5,796,683 - AO353_26445 0.65 -1.5 5,796,683 - AO353_26445 0.65 -0.1 5,796,683 - AO353_26445 0.65 -0.5 5,796,683 - AO353_26445 0.65 +1.5 5,796,683 - AO353_26445 0.65 -0.1 5,796,683 - AO353_26445 0.65 -1.0 5,796,683 - AO353_26445 0.65 -0.6 5,796,746 - AO353_26445 0.81 +0.0 5,796,755 - AO353_26445 0.83 +0.2 5,796,778 + AO353_26445 0.89 -0.4 5,796,778 + AO353_26445 0.89 +0.0 5,796,779 - AO353_26445 0.89 +0.2 5,796,779 - AO353_26445 0.89 -1.0 5,796,780 + AO353_26445 0.89 -0.5 5,796,781 - AO353_26445 0.90 +0.9 5,796,781 - AO353_26445 0.90 +0.2 5,796,781 - AO353_26445 0.90 -0.3 5,796,781 - AO353_26445 0.90 +0.4 5,796,799 + -1.1 5,796,799 + +0.1 5,796,800 - -0.3 5,796,800 - -0.5 5,796,800 - +0.0 5,796,800 - -1.1 5,796,800 - -0.4 5,796,800 - -2.0 5,796,835 + -0.8 5,796,835 + -0.1 5,796,835 + +0.3 5,796,835 + -1.3 5,796,835 + +1.8 5,796,836 - -0.8 5,796,836 - -0.5 5,796,836 - +0.9 5,796,836 - +0.8 5,796,836 - +0.3 5,796,838 + +0.2 5,796,838 + +0.1 5,796,854 + +0.8 5,796,854 + -1.3 5,796,854 + -1.3 5,796,854 + -0.1 5,796,855 - -0.1 5,796,855 - +1.2 5,796,858 + AO353_26450 0.11 -1.8 5,796,858 + AO353_26450 0.11 -1.0 5,796,858 + AO353_26450 0.11 -1.8 5,796,877 + AO353_26450 0.22 +0.9 5,796,878 - AO353_26450 0.22 -1.3 5,796,878 - AO353_26450 0.22 -0.7 5,796,878 - AO353_26450 0.22 +0.9 5,796,878 - AO353_26450 0.22 -1.3 5,796,878 - +0.2 5,796,878 - AO353_26450 0.22 -1.3 5,796,895 - AO353_26450 0.32 -1.1 5,796,949 - AO353_26450 0.61 +0.3 5,797,049 + +1.0 5,797,049 + -0.3 5,797,049 + -0.1 5,797,049 + -2.1 5,797,050 - -1.1 5,797,050 - -0.4 5,797,050 - -0.1 5,797,050 - -1.7 5,797,057 + -0.3 5,797,057 + -0.2 5,797,098 + -0.3 5,797,098 + -0.1 5,797,098 + -0.6 5,797,098 + -0.9 5,797,099 - -0.8 5,797,099 - -2.3 5,797,099 - -2.2 5,797,108 + -1.1 5,797,164 + -1.8 5,797,164 + -0.1 5,797,164 + -0.6 5,797,165 - +0.9 5,797,165 - +0.9 5,797,165 - +0.5 5,797,165 - +0.2 5,797,165 - -0.1 5,797,165 - -1.2 5,797,165 - -2.0 5,797,185 + +0.9 5,797,298 + AO353_26455 0.23 -0.5 5,797,298 + AO353_26455 0.23 +0.3 5,797,298 + AO353_26455 0.23 -1.1 5,797,298 + AO353_26455 0.23 -1.7 5,797,298 + AO353_26455 0.23 -0.6 5,797,298 + AO353_26455 0.23 -1.7 5,797,298 + AO353_26455 0.23 +0.5 5,797,298 + AO353_26455 0.23 -1.1 5,797,299 - AO353_26455 0.23 +0.1 5,797,299 - AO353_26455 0.23 -0.0 5,797,299 - AO353_26455 0.23 +0.9 5,797,299 - AO353_26455 0.23 -0.7 5,797,299 - AO353_26455 0.23 -0.3 5,797,300 - AO353_26455 0.23 -2.4 5,797,402 + AO353_26455 0.35 -0.1 5,797,403 - AO353_26455 0.35 -0.2 5,797,465 + AO353_26455 0.43 -1.0 5,797,465 + AO353_26455 0.43 -1.1 5,797,466 - AO353_26455 0.43 -0.1 5,797,673 + AO353_26455 0.67 +0.2 5,797,673 + AO353_26455 0.67 -1.2 5,797,673 + AO353_26455 0.67 +1.5 5,797,674 - AO353_26455 0.67 -1.8 5,797,674 - AO353_26455 0.67 -0.9 5,797,674 - AO353_26455 0.67 +1.5 5,797,674 - AO353_26455 0.67 -0.7 5,797,704 - AO353_26455 0.71 -1.5 5,797,704 - AO353_26455 0.71 -0.1 5,797,704 - AO353_26455 0.71 +0.5 5,797,710 + AO353_26455 0.71 -0.5 5,797,710 + AO353_26455 0.71 -1.0 5,797,711 - AO353_26455 0.71 -1.5 5,797,711 - AO353_26455 0.71 -1.2 5,797,711 - AO353_26455 0.71 +0.2 5,797,711 - AO353_26455 0.71 -0.9 5,797,750 + AO353_26455 0.76 -0.1 5,797,750 + AO353_26455 0.76 -0.4 5,797,750 + AO353_26455 0.76 -1.5 5,797,750 + +0.5 5,797,783 + AO353_26455 0.80 -0.1 5,797,784 - AO353_26455 0.80 -0.5 5,797,870 + AO353_26455 0.90 -0.4 5,797,870 + AO353_26455 0.90 -0.4 5,797,870 + AO353_26455 0.90 +0.8 5,797,871 - -1.0 5,797,871 - -2.1 5,797,889 - -0.7 5,797,897 - +0.5 5,797,964 + +0.5 5,797,964 + +2.5 5,797,979 + -1.1 5,797,979 + -1.2 5,797,979 + +0.8 5,797,980 - +0.8 5,797,980 - -0.5 5,797,980 - -1.4 5,797,980 - +0.3 5,797,980 - +0.5 5,797,994 - -1.4 5,798,012 + -1.2 5,798,012 + -0.7
Or see this region's nucleotide sequence