Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26390

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
5,789,273	+		AO353_26380	0.72	+0.2
5,789,273	+		AO353_26380	0.72	+0.5
5,789,273	+		AO353_26380	0.72	+0.3
5,789,310	-		AO353_26380	0.77	+0.5
5,789,310	-		AO353_26380	0.77	+1.0
5,789,310	-		AO353_26380	0.77	+0.2
5,789,333	-		AO353_26380	0.80	-0.5
5,789,333	-		AO353_26380	0.80	-2.2
5,789,334	+		AO353_26380	0.80	-0.1
5,789,334	+		AO353_26380	0.80	-0.6
5,789,335	-		AO353_26380	0.80	+0.2
5,789,467	-				+0.8
5,789,476	-				+0.5
5,789,530	+				+0.5
5,789,691	+				-0.8
5,789,691	+				+1.9
5,789,691	+				-0.6
5,789,691	+				-0.3
5,789,692	-				-0.8
5,789,692	-				-0.1
5,789,755	+				-1.5
5,789,755	+				-0.2
5,789,756	-				+0.2
5,789,756	-				+0.7
5,789,768	-				-0.3
5,789,780	+				-1.2
5,789,780	+				-1.3
5,789,780	+				-0.8
5,789,780	+				-0.3
5,789,780	+				+0.3
5,789,780	+				-2.0
5,789,780	+				+0.8
5,789,780	+				-0.8
5,789,780	+				+0.8
5,789,781	-				-0.5
5,789,781	-				-2.1
5,789,781	-				-1.1
5,789,781	-				-0.5
5,789,848	+		AO353_26385	0.28	-2.0
5,789,848	+		AO353_26385	0.28	-1.1
5,789,848	+		AO353_26385	0.28	-2.1
5,789,849	-		AO353_26385	0.28	-1.5
5,789,903	+		AO353_26385	0.44	-0.5
5,789,903	+		AO353_26385	0.44	+0.5
5,789,904	-		AO353_26385	0.44	+1.5
5,789,919	-		AO353_26385	0.49	+0.6
5,789,940	+		AO353_26385	0.55	-0.3
5,789,940	+		AO353_26385	0.55	-1.5
5,789,940	+		AO353_26385	0.55	-0.1
5,789,940	+		AO353_26385	0.55	-0.8
5,789,941	-		AO353_26385	0.55	+0.3
5,790,005	+		AO353_26385	0.74	-1.2
5,790,006	-		AO353_26385	0.74	-1.1
5,790,006	-		AO353_26385	0.74	+0.5
5,790,105	-				-0.5
5,790,105	-				-0.5
5,790,117	-				+1.5
5,790,117	-				+0.5
5,790,117	-				-0.2
5,790,120	+				-0.4
5,790,120	+				+0.3
5,790,120	+				-2.0
5,790,121	-				-1.3
5,790,121	-				+1.1
5,790,121	-				+0.6
5,790,121	-				+0.3
5,790,182	+				+0.5
5,790,182	+				-0.2
5,790,182	+				-2.1
5,790,182	+				-1.0
5,790,213	-				-0.4
5,790,277	+				+0.8
5,790,277	+				-0.6
5,790,277	+				+0.6
5,790,277	+				-1.2
5,790,293	-		AO353_26390	0.10	+0.3
5,790,470	+		AO353_26390	0.59	+0.0
5,790,471	-		AO353_26390	0.59	+1.1
5,790,478	+		AO353_26390	0.61	+0.5
5,790,552	+		AO353_26390	0.82	+1.2
5,790,585	+				+0.2
5,790,585	+				-1.1
5,790,586	-				-0.5
5,790,616	+				+1.5
5,790,617	-				-0.2
5,790,617	-				-0.2
5,790,656	-				-0.5
5,790,656	-				-2.1
5,790,658	+				+1.1
5,790,658	+				-0.1
5,790,658	+				+0.5
5,790,659	-				-0.2
5,790,659	-				+0.9
5,790,659	-				-1.0
5,790,659	-				-0.2
5,790,659	-				-0.2
5,790,664	+				+0.3
5,790,665	-				-0.6
5,790,665	-				-0.1
5,790,675	+				-0.0
5,790,675	+				+2.1
5,790,675	+				+2.2
5,790,675	+				+0.7
5,790,675	+				+1.5
5,790,675	+				-0.4
5,790,675	+				+1.5
5,790,675	+				-0.1
5,790,675	+				+0.7
5,790,676	-				-0.5
5,790,676	-				-1.8
5,790,676	-				-0.5
5,790,676	-				-1.1
5,790,676	-				+0.2
5,790,769	+				-0.4
5,790,769	+				+0.2
5,790,769	+				-0.3
5,790,769	+				-1.1
5,790,770	-				-0.8
5,790,770	-				+0.2
5,790,770	-				+0.0
5,790,770	-				+1.5
5,790,770	-				+0.5
5,790,770	-				-1.8
5,790,770	-				-0.1
5,790,771	+				+0.2
5,790,771	+				-0.1
5,790,771	+				-1.1
5,790,772	-				+0.2
5,790,772	-				-0.7
5,790,772	-				+0.7
5,790,772	-				-1.3
5,790,772	-				+1.2
5,790,772	-				-0.9
5,790,772	-				-1.3
5,790,772	-				-0.5
5,790,772	-				-1.8
5,790,772	-				-0.4
5,790,772	-				-0.7
5,790,956	+				-2.1
5,790,957	-				-0.6
5,790,957	-				-0.0
5,791,009	-		AO353_26400	0.19	-0.4
5,791,029	+		AO353_26400	0.28	-0.0
5,791,030	-		AO353_26400	0.28	-1.0
5,791,066	+		AO353_26400	0.44	-0.7
5,791,066	+		AO353_26400	0.44	+0.6
5,791,067	-		AO353_26400	0.44	+0.2
5,791,110	-		AO353_26400	0.62	+1.5
5,791,110	-		AO353_26400	0.62	+0.8
5,791,145	+		AO353_26400	0.77	+0.6
5,791,146	-		AO353_26400	0.78	-0.4
5,791,181	+				-0.1
5,791,315	+		AO353_26405	0.52	+0.2
5,791,315	+		AO353_26405	0.52	+0.5
5,791,383	+		AO353_26405	0.81	-1.3
5,791,383	+		AO353_26405	0.81	-0.8
5,791,384	-		AO353_26405	0.81	+0.2
5,791,384	-		AO353_26405	0.81	+1.5
5,791,384	-		AO353_26405	0.81	+1.2
5,791,384	-		AO353_26405	0.81	-1.5
5,791,392	+		AO353_26405	0.85	-1.2
5,791,392	+		AO353_26405	0.85	-0.3
5,791,392	+		AO353_26405	0.85	-1.6
5,791,392	+		AO353_26405	0.85	-0.3
5,791,392	+		AO353_26405	0.85	+0.3
5,791,392	+		AO353_26405	0.85	+0.2
5,791,393	-		AO353_26405	0.85	+0.5
5,791,393	-		AO353_26405	0.85	-0.2
5,791,393	-		AO353_26405	0.85	-1.5
5,791,429	+				-1.2
5,791,429	+				-2.3
5,791,429	+				-1.1
5,791,429	+				+1.5
5,791,429	+				-0.1
5,791,430	-				-3.0
5,791,430	-				-1.7
5,791,472	-		AO353_26410	0.24	-0.1
5,791,472	-		AO353_26410	0.24	+1.9
5,791,472	-		AO353_26410	0.24	+0.5
5,791,472	-		AO353_26410	0.24	-0.1
5,791,500	-		AO353_26410	0.38	-0.9
5,791,500	-				+2.5
5,791,500	-		AO353_26410	0.38	-0.5
5,791,500	-		AO353_26410	0.38	-0.1
5,791,548	-		AO353_26410	0.62	-0.8
5,791,548	-		AO353_26410	0.62	-0.6
5,791,548	-		AO353_26410	0.62	-1.5
5,791,548	-		AO353_26410	0.62	-1.1
5,791,548	-		AO353_26410	0.62	-0.2
5,791,578	+		AO353_26410	0.77	-0.8
5,791,579	-		AO353_26410	0.77	+0.2
5,791,579	-		AO353_26410	0.77	-0.1
5,791,579	-		AO353_26410	0.77	+0.2