Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26075 and AO353_26080 are separated by 138 nucleotides AO353_26080 and AO353_26085 are separated by 120 nucleotides
AO353_26075: AO353_26075 - FAD-binding protein, at 5,741,024 to 5,742,712
_26075
AO353_26080: AO353_26080 - hypothetical protein, at 5,742,851 to 5,743,060
_26080
AO353_26085: AO353_26085 - hypothetical protein, at 5,743,181 to 5,744,263
_26085
Position (kb) 5742
5743
5744 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5741.951 kb on + strand, within AO353_26075 at 5741.951 kb on + strand, within AO353_26075 at 5741.952 kb on - strand, within AO353_26075 at 5742.021 kb on + strand, within AO353_26075 at 5742.022 kb on - strand, within AO353_26075 at 5742.054 kb on - strand, within AO353_26075 at 5742.054 kb on - strand, within AO353_26075 at 5742.067 kb on - strand, within AO353_26075 at 5742.070 kb on - strand, within AO353_26075 at 5742.152 kb on + strand, within AO353_26075 at 5742.169 kb on + strand, within AO353_26075 at 5742.169 kb on + strand, within AO353_26075 at 5742.172 kb on + strand, within AO353_26075 at 5742.173 kb on - strand, within AO353_26075 at 5742.173 kb on - strand, within AO353_26075 at 5742.320 kb on + strand, within AO353_26075 at 5742.321 kb on - strand, within AO353_26075 at 5742.355 kb on + strand, within AO353_26075 at 5742.508 kb on + strand, within AO353_26075 at 5742.508 kb on + strand, within AO353_26075 at 5742.509 kb on - strand, within AO353_26075 at 5742.512 kb on + strand, within AO353_26075 at 5742.513 kb on - strand, within AO353_26075 at 5742.524 kb on + strand, within AO353_26075 at 5742.525 kb on - strand, within AO353_26075 at 5742.543 kb on + strand, within AO353_26075 at 5742.543 kb on + strand, within AO353_26075 at 5742.543 kb on + strand, within AO353_26075 at 5742.552 kb on + strand at 5742.552 kb on + strand at 5742.553 kb on - strand at 5742.555 kb on + strand at 5742.556 kb on - strand at 5742.593 kb on + strand at 5742.605 kb on - strand at 5742.616 kb on - strand at 5742.688 kb on - strand at 5742.691 kb on - strand at 5742.830 kb on - strand at 5742.994 kb on - strand, within AO353_26080 at 5742.994 kb on - strand, within AO353_26080 at 5742.994 kb on - strand, within AO353_26080 at 5743.080 kb on - strand at 5743.187 kb on - strand at 5743.191 kb on + strand at 5743.277 kb on - strand at 5743.300 kb on + strand, within AO353_26085 at 5743.398 kb on + strand, within AO353_26085 at 5743.472 kb on + strand, within AO353_26085 at 5743.594 kb on - strand, within AO353_26085 at 5743.640 kb on + strand, within AO353_26085 at 5743.641 kb on - strand, within AO353_26085 at 5743.641 kb on - strand, within AO353_26085 at 5743.645 kb on - strand, within AO353_26085 at 5743.654 kb on - strand, within AO353_26085 at 5743.830 kb on + strand, within AO353_26085 at 5743.951 kb on + strand, within AO353_26085 at 5744.040 kb on + strand, within AO353_26085 at 5744.041 kb on - strand, within AO353_26085 at 5744.045 kb on + strand, within AO353_26085
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 5,741,951 + AO353_26075 0.55 +0.5 5,741,951 + AO353_26075 0.55 +0.1 5,741,952 - AO353_26075 0.55 -0.7 5,742,021 + AO353_26075 0.59 -1.0 5,742,022 - AO353_26075 0.59 +1.5 5,742,054 - AO353_26075 0.61 -1.5 5,742,054 - AO353_26075 0.61 -0.1 5,742,067 - AO353_26075 0.62 -0.1 5,742,070 - AO353_26075 0.62 +0.1 5,742,152 + AO353_26075 0.67 -2.1 5,742,169 + AO353_26075 0.68 -1.1 5,742,169 + AO353_26075 0.68 -2.0 5,742,172 + AO353_26075 0.68 +0.3 5,742,173 - AO353_26075 0.68 -0.5 5,742,173 - AO353_26075 0.68 +1.5 5,742,320 + AO353_26075 0.77 +0.3 5,742,321 - AO353_26075 0.77 -0.4 5,742,355 + AO353_26075 0.79 -1.5 5,742,508 + AO353_26075 0.88 +0.1 5,742,508 + AO353_26075 0.88 +1.2 5,742,509 - AO353_26075 0.88 -0.8 5,742,512 + AO353_26075 0.88 -0.4 5,742,513 - AO353_26075 0.88 +0.2 5,742,524 + AO353_26075 0.89 -0.5 5,742,525 - AO353_26075 0.89 +0.7 5,742,543 + AO353_26075 0.90 -0.2 5,742,543 + AO353_26075 0.90 +1.7 5,742,543 + AO353_26075 0.90 +0.1 5,742,552 + +1.7 5,742,552 + -2.2 5,742,553 - -0.6 5,742,555 + +0.5 5,742,556 - +0.2 5,742,593 + -1.4 5,742,605 - -1.1 5,742,616 - +0.5 5,742,688 - -0.0 5,742,691 - -1.5 5,742,830 - -1.1 5,742,994 - AO353_26080 0.68 +0.5 5,742,994 - AO353_26080 0.68 -1.0 5,742,994 - AO353_26080 0.68 -3.0 5,743,080 - -1.2 5,743,187 - -0.8 5,743,191 + -0.1 5,743,277 - -0.3 5,743,300 + AO353_26085 0.11 -1.3 5,743,398 + AO353_26085 0.20 -0.1 5,743,472 + AO353_26085 0.27 -0.8 5,743,594 - AO353_26085 0.38 +0.7 5,743,640 + AO353_26085 0.42 -1.5 5,743,641 - AO353_26085 0.42 +0.5 5,743,641 - AO353_26085 0.42 +0.6 5,743,645 - AO353_26085 0.43 +0.6 5,743,654 - AO353_26085 0.44 +0.1 5,743,830 + AO353_26085 0.60 +0.1 5,743,951 + AO353_26085 0.71 -0.8 5,744,040 + AO353_26085 0.79 -0.7 5,744,041 - AO353_26085 0.79 -1.0 5,744,045 + AO353_26085 0.80 -0.1
Or see this region's nucleotide sequence