Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25840 and AO353_25845 are separated by 76 nucleotides AO353_25845 and AO353_25850 are separated by 403 nucleotides
AO353_25840: AO353_25840 - hypothetical protein, at 5,696,613 to 5,698,358
_25840
AO353_25845: AO353_25845 - GNAT family acetyltransferase, at 5,698,435 to 5,698,926
_25845
AO353_25850: AO353_25850 - peptidase C45, at 5,699,330 to 5,700,469
_25850
Position (kb) 5698
5699 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5697.525 kb on + strand, within AO353_25840 at 5697.525 kb on + strand, within AO353_25840 at 5697.526 kb on - strand, within AO353_25840 at 5697.526 kb on - strand, within AO353_25840 at 5697.526 kb on - strand, within AO353_25840 at 5697.526 kb on - strand, within AO353_25840 at 5697.570 kb on + strand, within AO353_25840 at 5697.570 kb on + strand, within AO353_25840 at 5697.570 kb on + strand, within AO353_25840 at 5697.570 kb on + strand, within AO353_25840 at 5697.571 kb on - strand, within AO353_25840 at 5697.660 kb on + strand, within AO353_25840 at 5697.660 kb on + strand, within AO353_25840 at 5697.660 kb on + strand, within AO353_25840 at 5697.660 kb on + strand, within AO353_25840 at 5697.792 kb on + strand, within AO353_25840 at 5697.792 kb on + strand, within AO353_25840 at 5697.792 kb on + strand, within AO353_25840 at 5697.792 kb on + strand, within AO353_25840 at 5697.793 kb on - strand, within AO353_25840 at 5697.793 kb on - strand, within AO353_25840 at 5697.799 kb on - strand, within AO353_25840 at 5697.879 kb on + strand, within AO353_25840 at 5697.879 kb on + strand, within AO353_25840 at 5697.879 kb on + strand, within AO353_25840 at 5697.879 kb on + strand, within AO353_25840 at 5697.879 kb on + strand, within AO353_25840 at 5697.880 kb on - strand, within AO353_25840 at 5697.880 kb on - strand, within AO353_25840 at 5697.889 kb on - strand, within AO353_25840 at 5697.889 kb on - strand, within AO353_25840 at 5697.889 kb on - strand, within AO353_25840 at 5697.889 kb on - strand, within AO353_25840 at 5697.906 kb on + strand, within AO353_25840 at 5697.907 kb on - strand, within AO353_25840 at 5697.907 kb on - strand, within AO353_25840 at 5697.907 kb on - strand, within AO353_25840 at 5697.943 kb on - strand, within AO353_25840 at 5697.975 kb on + strand, within AO353_25840 at 5697.975 kb on + strand, within AO353_25840 at 5698.034 kb on + strand, within AO353_25840 at 5698.063 kb on - strand, within AO353_25840 at 5698.146 kb on + strand, within AO353_25840 at 5698.147 kb on - strand, within AO353_25840 at 5698.147 kb on - strand, within AO353_25840 at 5698.272 kb on + strand at 5698.273 kb on - strand at 5698.356 kb on + strand at 5698.357 kb on - strand at 5698.437 kb on - strand at 5698.510 kb on - strand, within AO353_25845 at 5698.511 kb on + strand, within AO353_25845 at 5698.511 kb on + strand, within AO353_25845 at 5698.511 kb on + strand, within AO353_25845 at 5698.511 kb on + strand, within AO353_25845 at 5698.511 kb on + strand, within AO353_25845 at 5698.512 kb on - strand, within AO353_25845 at 5698.877 kb on - strand at 5698.889 kb on + strand at 5698.889 kb on + strand at 5698.890 kb on - strand at 5698.999 kb on + strand at 5699.000 kb on - strand at 5699.069 kb on - strand at 5699.137 kb on - strand at 5699.146 kb on - strand at 5699.146 kb on - strand at 5699.147 kb on + strand at 5699.148 kb on - strand at 5699.183 kb on + strand at 5699.184 kb on - strand at 5699.246 kb on + strand at 5699.247 kb on - strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.291 kb on + strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.292 kb on - strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.344 kb on + strand at 5699.345 kb on - strand at 5699.345 kb on - strand at 5699.409 kb on - strand at 5699.453 kb on + strand, within AO353_25850 at 5699.453 kb on + strand, within AO353_25850 at 5699.453 kb on + strand, within AO353_25850 at 5699.480 kb on + strand, within AO353_25850 at 5699.480 kb on + strand, within AO353_25850 at 5699.481 kb on - strand, within AO353_25850 at 5699.549 kb on + strand, within AO353_25850 at 5699.602 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.811 kb on + strand, within AO353_25850 at 5699.812 kb on - strand, within AO353_25850 at 5699.812 kb on - strand, within AO353_25850 at 5699.812 kb on - strand, within AO353_25850 at 5699.812 kb on - strand, within AO353_25850 at 5699.885 kb on + strand, within AO353_25850 at 5699.885 kb on + strand, within AO353_25850 at 5699.886 kb on - strand, within AO353_25850 at 5699.907 kb on - strand, within AO353_25850 at 5699.907 kb on - strand, within AO353_25850
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 5,697,525 + AO353_25840 0.52 -0.2 5,697,525 + AO353_25840 0.52 -0.1 5,697,526 - AO353_25840 0.52 -1.2 5,697,526 - AO353_25840 0.52 +2.5 5,697,526 - AO353_25840 0.52 -0.4 5,697,526 - AO353_25840 0.52 -0.9 5,697,570 + AO353_25840 0.55 -0.5 5,697,570 + AO353_25840 0.55 -0.8 5,697,570 + AO353_25840 0.55 +0.6 5,697,570 + AO353_25840 0.55 -1.1 5,697,571 - AO353_25840 0.55 -1.2 5,697,660 + AO353_25840 0.60 -0.5 5,697,660 + AO353_25840 0.60 +0.4 5,697,660 + AO353_25840 0.60 -1.9 5,697,660 + AO353_25840 0.60 +1.5 5,697,792 + AO353_25840 0.68 +0.0 5,697,792 + AO353_25840 0.68 -0.5 5,697,792 + AO353_25840 0.68 +0.5 5,697,792 + AO353_25840 0.68 -0.0 5,697,793 - AO353_25840 0.68 -1.0 5,697,793 - AO353_25840 0.68 -0.5 5,697,799 - AO353_25840 0.68 -0.1 5,697,879 + AO353_25840 0.73 -2.0 5,697,879 + AO353_25840 0.73 -0.1 5,697,879 + AO353_25840 0.73 -0.1 5,697,879 + AO353_25840 0.73 +0.9 5,697,879 + AO353_25840 0.73 +0.7 5,697,880 - AO353_25840 0.73 +0.5 5,697,880 - AO353_25840 0.73 +0.7 5,697,889 - AO353_25840 0.73 +1.2 5,697,889 - AO353_25840 0.73 +0.2 5,697,889 - AO353_25840 0.73 +0.5 5,697,889 - AO353_25840 0.73 +0.3 5,697,906 + AO353_25840 0.74 +0.5 5,697,907 - AO353_25840 0.74 -1.1 5,697,907 - AO353_25840 0.74 -1.5 5,697,907 - AO353_25840 0.74 +0.1 5,697,943 - AO353_25840 0.76 +0.2 5,697,975 + AO353_25840 0.78 +0.1 5,697,975 + AO353_25840 0.78 -0.6 5,698,034 + AO353_25840 0.81 -0.2 5,698,063 - AO353_25840 0.83 +1.1 5,698,146 + AO353_25840 0.88 +0.5 5,698,147 - AO353_25840 0.88 -1.0 5,698,147 - AO353_25840 0.88 -1.4 5,698,272 + -0.1 5,698,273 - +0.5 5,698,356 + -1.7 5,698,357 - -0.3 5,698,437 - -0.6 5,698,510 - AO353_25845 0.15 -2.0 5,698,511 + AO353_25845 0.15 -2.3 5,698,511 + AO353_25845 0.15 -0.5 5,698,511 + AO353_25845 0.15 -1.3 5,698,511 + AO353_25845 0.15 -0.7 5,698,511 + AO353_25845 0.15 -1.3 5,698,512 - AO353_25845 0.16 -1.5 5,698,877 - +1.0 5,698,889 + -0.1 5,698,889 + -0.5 5,698,890 - -0.5 5,698,999 + +0.0 5,699,000 - +0.1 5,699,069 - +0.6 5,699,137 - -1.2 5,699,146 - -0.1 5,699,146 - +0.3 5,699,147 + -0.9 5,699,148 - -0.5 5,699,183 + -1.9 5,699,184 - -0.5 5,699,246 + -2.0 5,699,247 - +0.5 5,699,291 + -0.5 5,699,291 + -0.5 5,699,291 + -0.3 5,699,291 + -1.6 5,699,291 + +0.1 5,699,291 + -0.0 5,699,291 + -1.4 5,699,291 + +2.8 5,699,291 + +0.5 5,699,292 - +0.3 5,699,292 - -1.0 5,699,292 - -0.8 5,699,292 - +0.6 5,699,292 - +0.2 5,699,292 - +1.1 5,699,292 - +0.9 5,699,292 - +1.1 5,699,292 - -1.2 5,699,344 + -0.3 5,699,344 + +1.1 5,699,344 + -1.3 5,699,344 + +2.5 5,699,344 + +1.5 5,699,344 + +0.0 5,699,344 + -0.1 5,699,344 + +0.6 5,699,344 + +0.5 5,699,345 - -0.1 5,699,345 - -0.9 5,699,409 - +0.7 5,699,453 + AO353_25850 0.11 +0.4 5,699,453 + AO353_25850 0.11 +0.5 5,699,453 + AO353_25850 0.11 -2.3 5,699,480 + AO353_25850 0.13 -0.3 5,699,480 + AO353_25850 0.13 +0.3 5,699,481 - AO353_25850 0.13 +0.5 5,699,549 + AO353_25850 0.19 +0.6 5,699,602 + AO353_25850 0.24 +0.1 5,699,811 + AO353_25850 0.42 -0.6 5,699,811 + AO353_25850 0.42 +1.5 5,699,811 + AO353_25850 0.42 -0.5 5,699,811 + AO353_25850 0.42 -0.5 5,699,811 + AO353_25850 0.42 -2.2 5,699,811 + AO353_25850 0.42 -0.1 5,699,811 + AO353_25850 0.42 +1.9 5,699,812 - AO353_25850 0.42 -0.7 5,699,812 - AO353_25850 0.42 +1.1 5,699,812 - AO353_25850 0.42 -0.5 5,699,812 - AO353_25850 0.42 -1.1 5,699,885 + AO353_25850 0.49 -1.5 5,699,885 + AO353_25850 0.49 +0.8 5,699,886 - AO353_25850 0.49 +3.1 5,699,907 - AO353_25850 0.51 -0.5 5,699,907 - AO353_25850 0.51 +1.1
Or see this region's nucleotide sequence