Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24480

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
5,381,087	+		AO353_24475	0.58	-0.3
5,381,087	+		AO353_24475	0.58	-0.7
5,381,087	+		AO353_24475	0.58	-0.1
5,381,087	+		AO353_24475	0.58	-2.3
5,381,087	+		AO353_24475	0.58	+0.6
5,381,088	-		AO353_24475	0.58	+2.5
5,381,088	-		AO353_24475	0.58	-0.2
5,381,088	-		AO353_24475	0.58	-1.8
5,381,138	+		AO353_24475	0.61	-1.6
5,381,138	+		AO353_24475	0.61	-0.4
5,381,138	+		AO353_24475	0.61	-1.3
5,381,138	+		AO353_24475	0.61	-1.0
5,381,139	-		AO353_24475	0.61	+0.3
5,381,139	-		AO353_24475	0.61	-1.5
5,381,139	-		AO353_24475	0.61	+1.1
5,381,144	+		AO353_24475	0.62	+0.2
5,381,144	+		AO353_24475	0.62	+0.3
5,381,144	+		AO353_24475	0.62	+0.2
5,381,145	-		AO353_24475	0.62	+0.3
5,381,155	+		AO353_24475	0.62	-1.7
5,381,155	+		AO353_24475	0.62	+0.8
5,381,155	+		AO353_24475	0.62	+0.3
5,381,155	+		AO353_24475	0.62	+1.2
5,381,155	+		AO353_24475	0.62	-0.3
5,381,155	+		AO353_24475	0.62	-1.5
5,381,155	+		AO353_24475	0.62	-0.7
5,381,156	-		AO353_24475	0.63	-2.1
5,381,156	-		AO353_24475	0.63	+0.5
5,381,156	-		AO353_24475	0.63	-0.1
5,381,156	-		AO353_24475	0.63	+1.5
5,381,156	-		AO353_24475	0.63	-0.7
5,381,264	+		AO353_24475	0.70	+0.5
5,381,264	+		AO353_24475	0.70	-0.2
5,381,334	+		AO353_24475	0.75	+0.1
5,381,334	+		AO353_24475	0.75	-0.1
5,381,488	+		AO353_24475	0.86	-0.3
5,381,488	+		AO353_24475	0.86	+0.5
5,381,489	-		AO353_24475	0.86	-2.0
5,381,489	-		AO353_24475	0.86	+0.3
5,381,513	+		AO353_24475	0.87	-0.7
5,381,513	+		AO353_24475	0.87	+1.5
5,381,514	-		AO353_24475	0.88	-1.3
5,381,514	-		AO353_24475	0.88	-0.7
5,381,514	-		AO353_24475	0.88	-2.1
5,381,578	+				-0.4
5,381,578	+				-0.1
5,381,579	-				-1.7
5,381,579	-				-1.2
5,381,653	+				-1.1
5,381,681	+				-1.3
5,381,681	+				+0.2
5,381,681	+				-0.8
5,381,681	+				-0.1
5,381,710	+				-0.2
5,381,763	+				-1.8
5,381,763	+				+2.5
5,381,763	+				-1.5
5,381,764	-				+0.3
5,381,764	-				-1.1
5,381,771	+				-0.8
5,381,772	-				+0.5
5,381,772	-				-0.5
5,381,772	-				-0.4
5,381,772	-				-0.4
5,381,772	-				+2.5
5,381,795	+				-0.5
5,381,796	-				+0.5
5,381,797	+				-0.5
5,381,797	+				-1.7
5,381,798	-				+0.9
5,381,911	+				+0.5
5,381,930	+				+0.2
5,381,930	+				+0.2
5,381,931	-				-0.7
5,381,945	+				-0.7
5,381,966	+				+2.1
5,381,966	+				-0.2
5,381,972	+				-0.5
5,381,991	+				+0.5
5,381,992	-				-0.2
5,381,992	-				-1.0
5,381,992	-				-0.2
5,382,010	+				+0.8
5,382,010	+				+0.4
5,382,010	+				-0.5
5,382,010	+				-0.5
5,382,067	+				-0.8
5,382,067	+				-0.8
5,382,068	-				+0.9
5,382,068	-				-0.4
5,382,068	-				-1.0
5,382,101	-				-1.1
5,382,101	-				-0.5
5,382,107	-				-2.0
5,382,107	-				-0.1
5,382,107	-				+0.5
5,382,266	+		AO353_24480	0.13	+2.5
5,382,266	+		AO353_24480	0.13	-0.1
5,382,267	-		AO353_24480	0.14	-1.3
5,382,267	-		AO353_24480	0.14	-0.1
5,382,272	+		AO353_24480	0.14	+1.5
5,382,272	+		AO353_24480	0.14	+0.5
5,382,273	-		AO353_24480	0.14	-0.1
5,382,273	-		AO353_24480	0.14	+0.3
5,382,286	+		AO353_24480	0.15	-0.7
5,382,286	+		AO353_24480	0.15	-0.2
5,382,286	+		AO353_24480	0.15	-0.1
5,382,286	+		AO353_24480	0.15	-1.2
5,382,286	+		AO353_24480	0.15	-1.2
5,382,286	+		AO353_24480	0.15	-0.5
5,382,287	-		AO353_24480	0.15	-0.5
5,382,287	-		AO353_24480	0.15	+0.2
5,382,287	-		AO353_24480	0.15	-0.3
5,382,438	+		AO353_24480	0.26	+1.0
5,382,438	+		AO353_24480	0.26	+0.3
5,382,470	+		AO353_24480	0.28	-0.5
5,382,471	-		AO353_24480	0.29	+1.1
5,382,573	+		AO353_24480	0.36	-1.7
5,382,573	+		AO353_24480	0.36	+0.4
5,382,573	+		AO353_24480	0.36	+0.3
5,382,573	+		AO353_24480	0.36	+2.8
5,382,574	-		AO353_24480	0.36	-1.8
5,382,574	-		AO353_24480	0.36	-0.1
5,382,574	-		AO353_24480	0.36	+1.8
5,382,574	-		AO353_24480	0.36	+2.3
5,382,574	-		AO353_24480	0.36	-0.1
5,382,629	+		AO353_24480	0.40	-0.9
5,382,630	-		AO353_24480	0.40	+0.2
5,382,649	+		AO353_24480	0.42	+0.5
5,382,649	+		AO353_24480	0.42	+0.5
5,382,649	+		AO353_24480	0.42	+0.6
5,382,650	-		AO353_24480	0.42	+0.8
5,382,650	-		AO353_24480	0.42	+0.8
5,382,650	-		AO353_24480	0.42	+0.9
5,382,650	-		AO353_24480	0.42	-0.7
5,382,650	-		AO353_24480	0.42	+0.6
5,382,650	-		AO353_24480	0.42	+1.2
5,382,650	-		AO353_24480	0.42	-0.3
5,382,670	-		AO353_24480	0.43	+0.5
5,382,670	-		AO353_24480	0.43	+0.8
5,382,788	-		AO353_24480	0.52	-0.1
5,382,811	+		AO353_24480	0.54	-0.8
5,382,811	+		AO353_24480	0.54	+1.9
5,382,811	+		AO353_24480	0.54	+1.8
5,382,811	+		AO353_24480	0.54	-0.8
5,382,812	-		AO353_24480	0.54	+0.2
5,382,812	-		AO353_24480	0.54	+1.5
5,382,812	-		AO353_24480	0.54	+0.3
5,382,836	+		AO353_24480	0.55	-0.5
5,382,836	+		AO353_24480	0.55	+1.9
5,382,837	-		AO353_24480	0.55	-1.2
5,382,856	-		AO353_24480	0.57	-0.5
5,382,915	+		AO353_24480	0.61	-0.8
5,382,915	+		AO353_24480	0.61	-1.5
5,382,915	+		AO353_24480	0.61	+1.0
5,382,915	+		AO353_24480	0.61	-0.2
5,382,915	+		AO353_24480	0.61	-0.1
5,382,916	-		AO353_24480	0.61	+0.3
5,383,031	-		AO353_24480	0.70	+0.9
5,383,042	+		AO353_24480	0.71	-0.5
5,383,043	-		AO353_24480	0.71	+0.4
5,383,139	+		AO353_24480	0.78	-0.2
5,383,140	-		AO353_24480	0.78	-1.3
5,383,140	-		AO353_24480	0.78	+1.1
5,383,140	-		AO353_24480	0.78	-0.6
5,383,140	-		AO353_24480	0.78	-1.3
5,383,140	-		AO353_24480	0.78	-0.1
5,383,140	-		AO353_24480	0.78	-0.8
5,383,150	-		AO353_24480	0.79	+0.5
5,383,150	-		AO353_24480	0.79	+1.3
5,383,150	-		AO353_24480	0.79	+1.1
5,383,321	+				-1.3
5,383,322	-				+0.3
5,383,322	-				-0.3
5,383,322	-				-0.9
5,383,322	-				+0.5
5,383,413	-				+1.0
5,383,413	-				-0.1
5,383,413	-				-0.1
5,383,413	-				+0.1
5,383,420	-				+0.2
5,383,420	-				-0.7
5,383,471	-				+4.1
5,383,471	-				-0.0
5,383,471	-				-0.3
5,383,471	-				+1.5
5,383,471	-				-0.3
5,383,487	+				+0.7
5,383,487	+				+1.1
5,383,487	+				-0.3
5,383,488	-				+2.2
5,383,572	+				-1.5
5,383,614	+				+2.1
5,383,761	+				-1.5
5,383,833	+		AO353_24485	0.15	+0.0
5,383,834	-		AO353_24485	0.15	-0.1
5,383,937	+		AO353_24485	0.32	-1.1
5,383,937	+		AO353_24485	0.32	-1.3
5,384,049	+		AO353_24485	0.49	+0.4
5,384,054	-		AO353_24485	0.50	-0.4
5,384,074	-		AO353_24485	0.53	-0.7
5,384,086	-		AO353_24485	0.55	+0.8
5,384,089	+		AO353_24485	0.56	-0.3
5,384,089	+		AO353_24485	0.56	-2.1
5,384,090	-		AO353_24485	0.56	-0.7
5,384,090	-		AO353_24485	0.56	-0.5
5,384,096	+		AO353_24485	0.57	+1.5
5,384,096	+		AO353_24485	0.57	-0.5
5,384,104	+		AO353_24485	0.58	-1.0
5,384,104	+				-0.1
5,384,104	+		AO353_24485	0.58	+1.5
5,384,104	+		AO353_24485	0.58	-1.1
5,384,105	-		AO353_24485	0.58	-0.0
5,384,105	-		AO353_24485	0.58	-0.3
5,384,105	-		AO353_24485	0.58	-0.2
5,384,105	-		AO353_24485	0.58	+0.2
5,384,176	-		AO353_24485	0.69	+1.1
5,384,176	-		AO353_24485	0.69	+0.0
5,384,202	+		AO353_24485	0.73	-0.8
5,384,238	-		AO353_24485	0.79	-0.6
5,384,293	-		AO353_24485	0.88	-1.7
5,384,295	+		AO353_24485	0.88	-0.4
5,384,295	+		AO353_24485	0.88	-0.1
5,384,295	+		AO353_24485	0.88	-0.2
5,384,295	+		AO353_24485	0.88	-0.1
5,384,295	+		AO353_24485	0.88	+0.3
5,384,296	-		AO353_24485	0.88	-0.3
5,384,320	-				-0.2
5,384,320	-				+0.9
5,384,371	-				-0.8
5,384,371	-				+0.3