Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22930

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_22925 and AO353_22930 are separated by 195 nucleotidesAO353_22930 and AO353_22935 are separated by 207 nucleotides AO353_22925: AO353_22925 - (Fe-S)-binding protein, at 5,031,387 to 5,032,799 _22925 AO353_22930: AO353_22930 - hypothetical protein, at 5,032,995 to 5,033,228 _22930 AO353_22935: AO353_22935 - alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase, at 5,033,436 to 5,035,433 _22935 Position (kb) 5032 5033 5034Strain fitness (log2 ratio) -2 -1 0 1 2 3at 5032.120 kb on + strand, within AO353_22925at 5032.121 kb on - strand, within AO353_22925at 5032.121 kb on - strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.130 kb on + strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.131 kb on - strand, within AO353_22925at 5032.172 kb on - strand, within AO353_22925at 5032.172 kb on - strand, within AO353_22925at 5032.172 kb on - strand, within AO353_22925at 5032.454 kb on - strand, within AO353_22925at 5032.770 kb on + strandat 5032.770 kb on + strandat 5032.770 kb on + strandat 5032.770 kb on + strandat 5032.770 kb on + strandat 5032.771 kb on - strandat 5032.771 kb on - strandat 5032.774 kb on - strandat 5032.790 kb on + strandat 5032.791 kb on - strandat 5032.791 kb on - strandat 5032.837 kb on + strandat 5032.838 kb on - strandat 5032.859 kb on + strandat 5033.055 kb on + strand, within AO353_22930at 5033.061 kb on + strand, within AO353_22930at 5033.089 kb on + strand, within AO353_22930at 5033.089 kb on + strand, within AO353_22930at 5033.090 kb on - strand, within AO353_22930at 5033.090 kb on - strand, within AO353_22930at 5033.254 kb on + strandat 5033.254 kb on + strandat 5033.254 kb on + strandat 5033.254 kb on + strandat 5033.255 kb on - strandat 5033.255 kb on - strandat 5033.255 kb on - strandat 5033.299 kb on + strandat 5033.366 kb on + strandat 5033.366 kb on + strandat 5033.366 kb on + strandat 5033.366 kb on + strandat 5033.366 kb on + strandat 5033.367 kb on - strandat 5033.367 kb on - strandat 5033.367 kb on - strandat 5033.367 kb on - strandat 5033.370 kb on + strandat 5033.370 kb on + strandat 5033.370 kb on + strandat 5033.371 kb on - strandat 5033.420 kb on + strandat 5033.466 kb on + strandat 5033.466 kb on + strandat 5033.466 kb on + strandat 5033.467 kb on - strandat 5033.467 kb on - strandat 5033.467 kb on - strandat 5033.467 kb on - strandat 5033.467 kb on - strandat 5033.514 kb on - strandat 5033.514 kb on - strandat 5033.514 kb on - strandat 5033.514 kb on - strandat 5033.514 kb on - strandat 5033.514 kb on - strandat 5033.567 kb on + strandat 5033.585 kb on - strandat 5033.594 kb on + strandat 5033.594 kb on + strandat 5033.595 kb on - strandat 5033.595 kb on - strandat 5033.595 kb on - strandat 5033.699 kb on + strand, within AO353_22935at 5033.699 kb on + strand, within AO353_22935at 5033.699 kb on + strand, within AO353_22935at 5033.699 kb on + strand, within AO353_22935at 5033.700 kb on - strand, within AO353_22935at 5034.013 kb on - strand, within AO353_22935at 5034.078 kb on + strand, within AO353_22935at 5034.078 kb on + strand, within AO353_22935at 5034.079 kb on - strand, within AO353_22935at 5034.125 kb on + strand, within AO353_22935at 5034.126 kb on - strand, within AO353_22935at 5034.126 kb on - strand, within AO353_22935at 5034.126 kb on - strand, within AO353_22935at 5034.186 kb on + strand, within AO353_22935at 5034.186 kb on + strand, within AO353_22935at 5034.186 kb on + strand, within AO353_22935at 5034.186 kb on + strand, within AO353_22935

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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5,032,120 + AO353_22925 0.52 -1.1
5,032,121 - AO353_22925 0.52 -0.4
5,032,121 - AO353_22925 0.52 +0.6
5,032,130 + AO353_22925 0.53 +0.6
5,032,130 + AO353_22925 0.53 -1.0
5,032,130 + AO353_22925 0.53 -0.0
5,032,130 + AO353_22925 0.53 -1.4
5,032,130 + AO353_22925 0.53 -0.0
5,032,130 + AO353_22925 0.53 +0.1
5,032,130 + AO353_22925 0.53 +0.3
5,032,130 + AO353_22925 0.53 -0.0
5,032,130 + AO353_22925 0.53 -0.7
5,032,130 + AO353_22925 0.53 +0.3
5,032,130 + AO353_22925 0.53 -0.0
5,032,130 + AO353_22925 0.53 -0.7
5,032,130 + AO353_22925 0.53 +0.6
5,032,130 + AO353_22925 0.53 -0.1
5,032,130 + AO353_22925 0.53 -0.0
5,032,130 + AO353_22925 0.53 +0.6
5,032,130 + AO353_22925 0.53 -0.4
5,032,130 + AO353_22925 0.53 -0.0
5,032,130 + AO353_22925 0.53 -0.2
5,032,130 + AO353_22925 0.53 +1.3
5,032,130 + AO353_22925 0.53 +1.0
5,032,130 + AO353_22925 0.53 -1.1
5,032,130 + AO353_22925 0.53 +0.6
5,032,130 + AO353_22925 0.53 -1.0
5,032,130 + AO353_22925 0.53 +0.3
5,032,131 - AO353_22925 0.53 -0.0
5,032,131 - AO353_22925 0.53 +1.0
5,032,131 - AO353_22925 0.53 +0.6
5,032,131 - AO353_22925 0.53 -0.0
5,032,131 - AO353_22925 0.53 +0.4
5,032,131 - AO353_22925 0.53 -0.1
5,032,131 - AO353_22925 0.53 -0.0
5,032,131 - AO353_22925 0.53 -0.4
5,032,131 - AO353_22925 0.53 -0.0
5,032,131 - AO353_22925 0.53 -0.7
5,032,131 - AO353_22925 0.53 +1.6
5,032,131 - AO353_22925 0.53 -1.3
5,032,131 - AO353_22925 0.53 +0.8
5,032,131 - AO353_22925 0.53 -0.3
5,032,131 - AO353_22925 0.53 +1.2
5,032,131 - AO353_22925 0.53 -0.2
5,032,131 - AO353_22925 0.53 +0.2
5,032,131 - AO353_22925 0.53 -1.1
5,032,131 - AO353_22925 0.53 -0.7
5,032,131 - AO353_22925 0.53 +0.6
5,032,131 - AO353_22925 0.53 +0.4
5,032,131 - AO353_22925 0.53 -1.4
5,032,131 - AO353_22925 0.53 +0.3
5,032,131 - AO353_22925 0.53 +0.7
5,032,131 - AO353_22925 0.53 +0.5
5,032,131 - AO353_22925 0.53 -2.0
5,032,131 - AO353_22925 0.53 -0.3
5,032,131 - AO353_22925 0.53 -0.7
5,032,172 - AO353_22925 0.56 -0.4
5,032,172 - AO353_22925 0.56 +0.6
5,032,172 - AO353_22925 0.56 -0.2
5,032,454 - AO353_22925 0.76 -0.1
5,032,770 + -1.6
5,032,770 + +0.6
5,032,770 + +1.8
5,032,770 + +1.6
5,032,770 + +0.5
5,032,771 - -1.9
5,032,771 - +1.6
5,032,774 - -1.9
5,032,790 + +0.4
5,032,791 - +3.6
5,032,791 - -0.0
5,032,837 + +1.2
5,032,838 - -1.0
5,032,859 + -1.0
5,033,055 + AO353_22930 0.26 -1.3
5,033,061 + AO353_22930 0.28 +0.3
5,033,089 + AO353_22930 0.40 -0.4
5,033,089 + AO353_22930 0.40 -0.2
5,033,090 - AO353_22930 0.41 +2.3
5,033,090 - AO353_22930 0.41 +0.8
5,033,254 + +1.1
5,033,254 + -0.6
5,033,254 + -0.7
5,033,254 + +0.4
5,033,255 - -1.5
5,033,255 - -0.0
5,033,255 - -1.2
5,033,299 + -0.6
5,033,366 + +1.0
5,033,366 + +0.1
5,033,366 + -0.3
5,033,366 + -0.7
5,033,366 + -0.1
5,033,367 - -0.0
5,033,367 - -1.0
5,033,367 - -2.0
5,033,367 - +1.0
5,033,370 + -1.0
5,033,370 + +0.3
5,033,370 + +0.6
5,033,371 - +0.6
5,033,420 + +0.6
5,033,466 + -0.0
5,033,466 + +1.8
5,033,466 + +2.6
5,033,467 - -0.0
5,033,467 - -0.0
5,033,467 - -0.0
5,033,467 - -0.9
5,033,467 - +0.9
5,033,514 - -0.3
5,033,514 - +0.8
5,033,514 - -0.7
5,033,514 - +0.2
5,033,514 - -0.3
5,033,514 - -0.2
5,033,567 + -0.0
5,033,585 - -1.0
5,033,594 + -1.4
5,033,594 + -1.9
5,033,595 - +0.6
5,033,595 - -0.3
5,033,595 - +0.2
5,033,699 + AO353_22935 0.13 +1.3
5,033,699 + AO353_22935 0.13 +0.8
5,033,699 + AO353_22935 0.13 -0.9
5,033,699 + AO353_22935 0.13 -0.2
5,033,700 - AO353_22935 0.13 +2.6
5,034,013 - AO353_22935 0.29 +0.8
5,034,078 + AO353_22935 0.32 -0.4
5,034,078 + AO353_22935 0.32 -0.0
5,034,079 - AO353_22935 0.32 +0.3
5,034,125 + AO353_22935 0.34 -0.1
5,034,126 - AO353_22935 0.35 -1.0
5,034,126 - AO353_22935 0.35 +0.4
5,034,126 - AO353_22935 0.35 +0.1
5,034,186 + AO353_22935 0.38 +1.6
5,034,186 + AO353_22935 0.38 -0.0
5,034,186 + AO353_22935 0.38 +1.3
5,034,186 + AO353_22935 0.38 +1.0

Or see this region's nucleotide sequence